EWM26872.1, cds3800 (CDS) Nannochloropsis gaditana

Overview
NameEWM26872.1
Unique Namecds3800
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:111198..112520 +

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Properties
Property NameValue
Start range111198
Start range.
Protein idEWM26872.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101061g1.7801.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:111198..112520 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26872.1 vs. NCBI_GenBank
Match: gi|585108975|gb|EWM26872.1| (hypothetical protein Naga_101061g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 852.818 bits (2202), Expect = 0.000e+0
Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0 
Query:    1 EGAGEGGAGRLGSLSTSKGRRTSALGLSHSSLQPSFATSPSLEASAEVVGAGGGWEEGEYNDLDVSVDLVDEEQPLLSRGDRLQRRRAEVEKLVQRCQGYRVLLQEGVGVEVMEVLLPPSPAPPSSPSHPFPPSLPPSCTFHPVKMRVEGLLSPSRLSDPDPTSPLALPIGNEDLVKARLVWEDDKHHPSKRGSFFQSLGWGRTRRMSSLGTTTASLGPGAQAVPDAIHLTELYGVVRGLRRIRPKAVYLAAAAAVMAAAEGEAGGRGRDGTQPTLNPDNPPTSAKTTTRVGLALSSAGRSERVFGRPAQVPGRPLTGRFVSGHLGGVGGGRGGGTGGGLRLGEVAAGAGQGEAGVCPGGGGRGRRREGGRGRGALRVPGRCPSRAWRGEEGNQTDVWALAGHGIRRERTRGREQRAAGGGDEAGVDFERERHGVGEGAP 440
            EGAGEGGAGRLGSLSTSKGRRTSALGLSHSSLQPSFATSPSLEASAEVVGAGGGWEEGEYNDLDVSVDLVDEEQPLLSRGDRLQRRRAEVEKLVQRCQGYRVLLQEGVGVEVMEVLLPPSPAPPSSPSHPFPPSLPPSCTFHPVKMRVEGLLSPSRLSDPDPTSPLALPIGNEDLVKARLVWEDDKHHPSKRGSFFQSLGWGRTRRMSSLGTTTASLGPGAQAVPDAIHLTELYGVVRGLRRIRPKAVYLAAAAAVMAAAEGEAGGRGRDGTQPTLNPDNPPTSAKTTTRVGLALSSAGRSERVFGRPAQVPGRPLTGRFVSGHLGGVGGGRGGGTGGGLRLGEVAAGAGQGEAGVCPGGGGRGRRREGGRGRGALRVPGRCPSRAWRGEEGNQTDVWALAGHGIRRERTRGREQRAAGGGDEAGVDFERERHGVGEGAP
Sbjct:    1 EGAGEGGAGRLGSLSTSKGRRTSALGLSHSSLQPSFATSPSLEASAEVVGAGGGWEEGEYNDLDVSVDLVDEEQPLLSRGDRLQRRRAEVEKLVQRCQGYRVLLQEGVGVEVMEVLLPPSPAPPSSPSHPFPPSLPPSCTFHPVKMRVEGLLSPSRLSDPDPTSPLALPIGNEDLVKARLVWEDDKHHPSKRGSFFQSLGWGRTRRMSSLGTTTASLGPGAQAVPDAIHLTELYGVVRGLRRIRPKAVYLAAAAAVMAAAEGEAGGRGRDGTQPTLNPDNPPTSAKTTTRVGLALSSAGRSERVFGRPAQVPGRPLTGRFVSGHLGGVGGGRGGGTGGGLRLGEVAAGAGQGEAGVCPGGGGRGRRREGGRGRGALRVPGRCPSRAWRGEEGNQTDVWALAGHGIRRERTRGREQRAAGGGDEAGVDFERERHGVGEGAP 440
The following BLAST results are available for this feature:
BLAST of EWM26872.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108975|gb|EWM26872.1|0.000e+0100.00hypothetical protein Naga_101061g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3809rna3809Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications