EWM30639.1, cds38 (CDS) Nannochloropsis gaditana

Overview
NameEWM30639.1
Unique Namecds38
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:110954..111031 -
Alignment locationCM002455.1:110614..110769 -
Alignment locationCM002455.1:110317..110445 -
Alignment locationCM002455.1:109980..110171 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30639.1
ProductGlycosyltransferase AER61, uncharacterized
Orig transcript idgnl|cribi|Naga_100568g5.697.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:110954..111031 -
CM002455.1supercontigCM002455.1:110614..110769 -
CM002455.1supercontigCM002455.1:110317..110445 -
CM002455.1supercontigCM002455.1:109980..110171 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016757transferase activity, transferring glycosyl groups
Vocabulary: INTERPRO
TermDefinition
IPR007657Glycosyltransferase_AER61
Homology
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|585113324|gb|EWM30639.1| (Glycosyltransferase AER61, uncharacterized [Nannochloropsis gaditana])

HSP 1 Score: 379.793 bits (974), Expect = 1.860e-133
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query:    1 MAAFFRRQILGAGSANAHRDTQQLLQPSTQPYILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVVQDVLVERTERKEWLCC 184
            MAAFFRRQILGAGSANAHRDTQQLLQPSTQPYILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVVQDVLVERTERKEWLCC
Sbjct:    1 MAAFFRRQILGAGSANAHRDTQQLLQPSTQPYILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVVQDVLVERTERKEWLCC 184          
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|1000483032|gb|KXL43940.1| (glycosyltransferase family 61 protein [Acidomyces richmondensis])

HSP 1 Score: 64.6994 bits (156), Expect = 5.054e-9
Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 0
Query:    5 FRRQILGAGSANAHRDTQQLLQPSTQPY-ILLVDRAASR--LLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPD---YPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKR--VYVDSRKLLAVVQDVLVERTERKE 180
            F R++L   +   + DT     PS +P  I  VDR   R  L KD       +  + LR +    N++ V    IP   Q +     +IL+GVHGA LT+ ++  P +STV+EI   P K D   + NMA+ +G  +RY +  GV+   ++N   W+   VY+   + L ++Q  + +   R++
Sbjct:  247 FSRRVLDFYNITTNYDT-----PSEKPLTITFVDRQEKRRLLYKD-------QYVQSLRSQYPDINIQLVDFASIPLIEQIQIAHSTNILVGVHGAGLTHGMFLMP-NSTVVEI--LPPKLDHHGFDNMAKFLG--HRYFSRHGVDYVSEVNTGDWQHDDVYISKDEFLQLMQSAITDTRARRK 413          
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|1005707252|gb|KYG48203.1| (glycosyltransferase family 61 protein [Acidomyces richmondensis BFW])

HSP 1 Score: 64.6994 bits (156), Expect = 5.092e-9
Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 0
Query:    5 FRRQILGAGSANAHRDTQQLLQPSTQPY-ILLVDRAASR--LLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPD---YPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKR--VYVDSRKLLAVVQDVLVERTERKE 180
            F R++L   +   + DT     PS +P  I  VDR   R  L KD   ++       LR +    N++ V    IP   Q +     +IL+GVHGA LT+ ++  P +STV+EI   P K D   + NMA+ +G  +RY +  GV+   ++N   W+   VY+   + L ++Q  + +   R++
Sbjct:  292 FSRRVLDFYNITTNYDT-----PSEKPLTITFVDRQEKRRLLYKDQYVQS-------LRSQYPDINIQLVDFASIPLIEQIQIAHSTNILVGVHGAGLTHGMFLMP-NSTVVEI--LPPKLDHHGFDNMAKFLG--HRYFSRHGVDYVSEVNTGDWQHDDVYISKDEFLQLMQSAITDTRARRK 458          
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|568464050|ref|XP_006463780.1| (hypothetical protein AGABI2DRAFT_208690 [Agaricus bisporus var. bisporus H97] >gi|426194527|gb|EKV44458.1| hypothetical protein AGABI2DRAFT_208690 [Agaricus bisporus var. bisporus H97])

HSP 1 Score: 62.3882 bits (150), Expect = 3.432e-8
Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   28 STQPYILLVDRAAS-RLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVD-STVIEIGFQ-PRKPDYPNMARVVGRAY 135
            S++P ++ ++R  + R L + S  +  E    L EEGG+  L+ VRME+I    Q   V R++I++GVHG  LT+ +W PP   S+VIEI      + DY  +AR VG  +
Sbjct:  370 SSKPVVIYLNRQKTGRRLDEESHESLVEALEAL-EEGGVCELQIVRMEEIGLREQIRLVSRSTIMVGVHGNGLTHQLWMPPSKRSSVIEIVMPGSYEFDYEIVARNVGHKH 479          
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|597992379|ref|XP_007332538.1| (hypothetical protein AGABI1DRAFT_78054 [Agaricus bisporus var. burnettii JB137-S8] >gi|409076566|gb|EKM76937.1| hypothetical protein AGABI1DRAFT_78054 [Agaricus bisporus var. burnettii JB137-S8])

HSP 1 Score: 60.8474 bits (146), Expect = 1.322e-7
Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 0
Query:   28 STQPYILLVDRAAS-RLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVD-STVIEIGF-QPRKPDYPNMARVVGRAY 135
            S++P ++ ++R  + R L + S  +  E    L EEGG+  L+ VRME+I    Q   V +++I++GVHG  LT+ +W PP   S+VIEI      + DY  +AR VG  +
Sbjct:  361 SSKPVVIYLNRQKTGRRLDEESHESLVEALEAL-EEGGVCELQIVRMEEIGLREQIRLVSQSTIMVGVHGNGLTHQLWMPPSKRSSVIEIVMPGSYEFDYEIVARNVGHKH 470          
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|1000841045|gb|KXN82749.1| (hypothetical protein AN958_02188 [Leucoagaricus sp. SymC.cos])

HSP 1 Score: 59.6918 bits (143), Expect = 3.212e-7
Identity = 37/111 (33.33%), Postives = 62/111 (55.86%), Query Frame = 0
Query:   28 STQPYILLVDR-AASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPP-VDSTVIEIGF-QPRKPDYPNMARVVGRAY 135
            S +P +  ++R   +R L D S ++  +  R L +EG +  ++ VR E++P + Q     R+SI++ VHG  LT+ +W PP   S +IEI + Q    DY  +AR +G  +
Sbjct:  371 SKKPVVTYINRQGTNRRLTDESHQSLVDALRELEKEG-VCEVQIVRFENVPLKEQVRLAARSSIMVAVHGNGLTHQLWMPPSARSAIIEIVYPQAYSFDYEMLARNMGHKH 480          
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|224008206|ref|XP_002293062.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971188|gb|EED89523.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 58.9214 bits (141), Expect = 5.399e-7
Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 0
Query:   32 YILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTV--------IEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVV 168
            ++L+V R   R L  +   +F E+   +   G    ++ +  ED+  E Q +    A++L+  HGAAL++  W  P  + V        +E G    K DY N+AR  G  Y Y     +  K DL  I+ K + VD+ +L  VV
Sbjct:  279 HVLIVQRRGDRRLVGSRNGSFVEVVDAICNLG--IPVKVIEFEDLSAEQQIQSAQSANVLVAAHGAALSHAAWMKPGGAIVEVLMRQGFVEFG-DYHKADYANLARFFGLKYVYYDPLELLPKEDL--ISSKLIVVDTDELARVV 418          
The following BLAST results are available for this feature:
BLAST of EWM30639.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585113324|gb|EWM30639.1|1.860e-133100.00Glycosyltransferase AER61, uncharacterized [Nannoc... [more]
gi|1000483032|gb|KXL43940.1|5.054e-930.43glycosyltransferase family 61 protein [Acidomyces ... [more]
gi|1005707252|gb|KYG48203.1|5.092e-930.43glycosyltransferase family 61 protein [Acidomyces ... [more]
gi|568464050|ref|XP_006463780.1|3.432e-837.84hypothetical protein AGABI2DRAFT_208690 [Agaricus ... [more]
gi|597992379|ref|XP_007332538.1|1.322e-736.94hypothetical protein AGABI1DRAFT_78054 [Agaricus b... [more]
gi|1000841045|gb|KXN82749.1|3.212e-733.33hypothetical protein AN958_02188 [Leucoagaricus sp... [more]
gi|224008206|ref|XP_002293062.1|5.399e-729.66predicted protein [Thalassiosira pseudonana CCMP13... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna38rna38Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications