EWM30639.1, cds38 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|585113324|gb|EWM30639.1| (Glycosyltransferase AER61, uncharacterized [Nannochloropsis gaditana]) HSP 1 Score: 379.793 bits (974), Expect = 1.860e-133 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query: 1 MAAFFRRQILGAGSANAHRDTQQLLQPSTQPYILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVVQDVLVERTERKEWLCC 184
MAAFFRRQILGAGSANAHRDTQQLLQPSTQPYILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVVQDVLVERTERKEWLCC
Sbjct: 1 MAAFFRRQILGAGSANAHRDTQQLLQPSTQPYILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVVQDVLVERTERKEWLCC 184
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|1000483032|gb|KXL43940.1| (glycosyltransferase family 61 protein [Acidomyces richmondensis]) HSP 1 Score: 64.6994 bits (156), Expect = 5.054e-9 Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 0
Query: 5 FRRQILGAGSANAHRDTQQLLQPSTQPY-ILLVDRAASR--LLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPD---YPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKR--VYVDSRKLLAVVQDVLVERTERKE 180
F R++L + + DT PS +P I VDR R L KD + + LR + N++ V IP Q + +IL+GVHGA LT+ ++ P +STV+EI P K D + NMA+ +G +RY + GV+ ++N W+ VY+ + L ++Q + + R++
Sbjct: 247 FSRRVLDFYNITTNYDT-----PSEKPLTITFVDRQEKRRLLYKD-------QYVQSLRSQYPDINIQLVDFASIPLIEQIQIAHSTNILVGVHGAGLTHGMFLMP-NSTVVEI--LPPKLDHHGFDNMAKFLG--HRYFSRHGVDYVSEVNTGDWQHDDVYISKDEFLQLMQSAITDTRARRK 413
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|1005707252|gb|KYG48203.1| (glycosyltransferase family 61 protein [Acidomyces richmondensis BFW]) HSP 1 Score: 64.6994 bits (156), Expect = 5.092e-9 Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 0
Query: 5 FRRQILGAGSANAHRDTQQLLQPSTQPY-ILLVDRAASR--LLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTVIEIGFQPRKPD---YPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKR--VYVDSRKLLAVVQDVLVERTERKE 180
F R++L + + DT PS +P I VDR R L KD ++ LR + N++ V IP Q + +IL+GVHGA LT+ ++ P +STV+EI P K D + NMA+ +G +RY + GV+ ++N W+ VY+ + L ++Q + + R++
Sbjct: 292 FSRRVLDFYNITTNYDT-----PSEKPLTITFVDRQEKRRLLYKDQYVQS-------LRSQYPDINIQLVDFASIPLIEQIQIAHSTNILVGVHGAGLTHGMFLMP-NSTVVEI--LPPKLDHHGFDNMAKFLG--HRYFSRHGVDYVSEVNTGDWQHDDVYISKDEFLQLMQSAITDTRARRK 458
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|568464050|ref|XP_006463780.1| (hypothetical protein AGABI2DRAFT_208690 [Agaricus bisporus var. bisporus H97] >gi|426194527|gb|EKV44458.1| hypothetical protein AGABI2DRAFT_208690 [Agaricus bisporus var. bisporus H97]) HSP 1 Score: 62.3882 bits (150), Expect = 3.432e-8 Identity = 42/111 (37.84%), Postives = 64/111 (57.66%), Query Frame = 0
Query: 28 STQPYILLVDRAAS-RLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVD-STVIEIGFQ-PRKPDYPNMARVVGRAY 135
S++P ++ ++R + R L + S + E L EEGG+ L+ VRME+I Q V R++I++GVHG LT+ +W PP S+VIEI + DY +AR VG +
Sbjct: 370 SSKPVVIYLNRQKTGRRLDEESHESLVEALEAL-EEGGVCELQIVRMEEIGLREQIRLVSRSTIMVGVHGNGLTHQLWMPPSKRSSVIEIVMPGSYEFDYEIVARNVGHKH 479
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|597992379|ref|XP_007332538.1| (hypothetical protein AGABI1DRAFT_78054 [Agaricus bisporus var. burnettii JB137-S8] >gi|409076566|gb|EKM76937.1| hypothetical protein AGABI1DRAFT_78054 [Agaricus bisporus var. burnettii JB137-S8]) HSP 1 Score: 60.8474 bits (146), Expect = 1.322e-7 Identity = 41/111 (36.94%), Postives = 64/111 (57.66%), Query Frame = 0
Query: 28 STQPYILLVDRAAS-RLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVD-STVIEIGF-QPRKPDYPNMARVVGRAY 135
S++P ++ ++R + R L + S + E L EEGG+ L+ VRME+I Q V +++I++GVHG LT+ +W PP S+VIEI + DY +AR VG +
Sbjct: 361 SSKPVVIYLNRQKTGRRLDEESHESLVEALEAL-EEGGVCELQIVRMEEIGLREQIRLVSQSTIMVGVHGNGLTHQLWMPPSKRSSVIEIVMPGSYEFDYEIVARNVGHKH 470
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|1000841045|gb|KXN82749.1| (hypothetical protein AN958_02188 [Leucoagaricus sp. SymC.cos]) HSP 1 Score: 59.6918 bits (143), Expect = 3.212e-7 Identity = 37/111 (33.33%), Postives = 62/111 (55.86%), Query Frame = 0
Query: 28 STQPYILLVDR-AASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPP-VDSTVIEIGF-QPRKPDYPNMARVVGRAY 135
S +P + ++R +R L D S ++ + R L +EG + ++ VR E++P + Q R+SI++ VHG LT+ +W PP S +IEI + Q DY +AR +G +
Sbjct: 371 SKKPVVTYINRQGTNRRLTDESHQSLVDALRELEKEG-VCEVQIVRFENVPLKEQVRLAARSSIMVAVHGNGLTHQLWMPPSARSAIIEIVYPQAYSFDYEMLARNMGHKH 480
BLAST of EWM30639.1 vs. NCBI_GenBank
Match: gi|224008206|ref|XP_002293062.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220971188|gb|EED89523.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 58.9214 bits (141), Expect = 5.399e-7 Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 0
Query: 32 YILLVDRAASRLLKDNSTRTFEEITRVLREEGGLTNLEAVRMEDIPEEGQFEKVMRASILIGVHGAALTNMVWQPPVDSTV--------IEIGFQPRKPDYPNMARVVGRAYRYLAAEGVEEKIDLNPIAWKRVYVDSRKLLAVV 168
++L+V R R L + +F E+ + G ++ + ED+ E Q + A++L+ HGAAL++ W P + V +E G K DY N+AR G Y Y + K DL I+ K + VD+ +L VV
Sbjct: 279 HVLIVQRRGDRRLVGSRNGSFVEVVDAICNLG--IPVKVIEFEDLSAEQQIQSAQSANVLVAAHGAALSHAAWMKPGGAIVEVLMRQGFVEFG-DYHKADYANLARFFGLKYVYYDPLELLPKEDL--ISSKLIVVDTDELARVV 418 The following BLAST results are available for this feature:
BLAST of EWM30639.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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