EWM26874.1, cds3799 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|585108980|gb|EWM26874.1| (Myosin head, motor domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 470.7 bits (1210), Expect = 8.336e-168 Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0
Query: 1 PPSLPLSRQVTHLFGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLAVALALPPSRSPSLPHVIDAVRDPLKTREWCWRVLDAILENQVGR 231
PPSLPLSRQVTHLFGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLAVALALPPSRSPSLPHVIDAVRDPLKTREWCWRVLDAILENQVGR
Sbjct: 1 PPSLPLSRQVTHLFGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLAVALALPPSRSPSLPHVIDAVRDPLKTREWCWRVLDAILENQVGR 231
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|299117468|emb|CBN73971.1| (myosin II heavy chain [Ectocarpus siliculosus]) HSP 1 Score: 172.17 bits (435), Expect = 1.425e-45 Identity = 87/173 (50.29%), Postives = 108/173 (62.43%), Query Frame = 0
Query: 14 FGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCL 186
F ++HYAG+V YN F DKN+D LP E+ LF SS + FV +LF PTG A + SP + S S + +P + +V +QF+ QL +LM + TRPHYIRC+KPND PD +R R+ EQLRYGGVLEAVRVARSGYPVRL H +FY RYRCL
Sbjct: 583 FAIKHYAGQVRYNVHTFCDKNKDELPNESDVLFASSTNEFVVNLFS---PTGGKKARSKGKRPISPGQSSTSTNTSKK-----DSPGFAGLKPTVGTQFRGQLHDLMDMIRDTRPHYIRCIKPNDNAEPDEVSRVRVMEQLRYGGVLEAVRVARSGYPVRLPHKDFYVRYRCL 747
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|299117465|emb|CBN73968.1| (myosin D [Ectocarpus siliculosus]) HSP 1 Score: 159.458 bits (402), Expect = 4.527e-41 Identity = 86/173 (49.71%), Postives = 103/173 (59.54%), Query Frame = 0
Query: 14 FGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCL 186
F V+HYAG+V Y+ + F DKN+D LPKE+ LF SS + FV +LF + A +A S G G P+ V +QFK QL LM + TRPHYIRC+KPND PD +R R+ EQLRYGGVLEAVRVARSGYPVRL H +FY RYRCL
Sbjct: 584 FAVKHYAGQVEYHVETFCDKNKDELPKESDELFASSTNDFVVNLFAPAGAKKAKTKGKKPAAPKPKKDAS---------GVAGLKPT-------VGTQFKDQLHNLMDMIKDTRPHYIRCIKPNDNAEPDEVSRVRVMEQLRYGGVLEAVRVARSGYPVRLPHKDFYTRYRCL 740
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|239925819|gb|ACS35544.1| (myosin H [Phaeodactylum tricornutum]) HSP 1 Score: 146.362 bits (368), Expect = 1.448e-36 Identity = 85/183 (46.45%), Postives = 109/183 (59.56%), Query Frame = 0
Query: 9 QVTHL-FGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSL---FKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLA 187
Q HL F V HYAG V Y +GF +KNRD LP T LFLSS+S+FVQ L + +P + A A S+ + +RS S G +V+ QF++QL +L SK+ +T PHYIRCLKPND +PD F+ + EQLR GG+LEAVRVAR+G+ HS+FY RYR LA
Sbjct: 752 QKAHLQFAVHHYAGPVTYTAKGFTEKNRDELPTSTRTLFLSSESTFVQQLAHILEWAPNSNASA----SAFSVRSFQRSDSTVGRP----------------TVAGQFQRQLKKLRSKIDQTSPHYIRCLKPNDCLLPDKFDVAVVAEQLRCGGILEAVRVARAGFTQHYPHSDFYRRYRVLA 914
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|219129131|ref|XP_002184750.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403859|gb|EEC43809.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 145.591 bits (366), Expect = 2.420e-36 Identity = 86/183 (46.99%), Postives = 110/183 (60.11%), Query Frame = 0
Query: 9 QVTHL-FGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSL---FKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLA 187
Q HL F V HYAG V Y +GF +KNRD LP T LFLSS+S+FVQ L + +P + A A S+ + +RS S G P+ V+ QF++QL +L SK+ +T PHYIRCLKPND +PD F+ + EQLR GG+LEAVRVAR+G+ HS+FY RYR LA
Sbjct: 517 QKAHLQFAVHHYAGPVTYTAKGFTEKNRDELPTSTRTLFLSSESTFVQQLAHILEWAPNSNASA----SAFSVRSFQRSDSTVG---------RPT-------VAGQFQRQLKKLRSKIDQTSPHYIRCLKPNDCLLPDKFDVAVVAEQLRCGGILEAVRVARAGFTQHYPHSDFYRRYRVLA 679
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|673023740|ref|XP_008865831.1| (hypothetical protein H310_03651 [Aphanomyces invadans] >gi|574479059|gb|ETW06054.1| hypothetical protein H310_03651 [Aphanomyces invadans]) HSP 1 Score: 145.591 bits (366), Expect = 2.592e-36 Identity = 79/184 (42.93%), Postives = 104/184 (56.52%), Query Frame = 0
Query: 14 FGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLAVALALPPSRS 197
F V HYAG V Y+ GFLDKN+D L L +S+S + ++ + S ++ RR+A H SS+ S++V+ QFK QL EL++ + +T PHY+RCLKPND N P TF+R R+ EQLR GGVLEAV+VAR+G+PVRL H EF Y L L P R
Sbjct: 589 FTVLHYAGPVNYSVDGFLDKNKDALLDSLVELLQNSESFILHDIYHAA-----------SKQTATTKRRAALH--------------SSIGSVNVAEQFKAQLTELVATIEKTAPHYVRCLKPNDANRPHTFDRVRMVEQLRSGGVLEAVKVARAGFPVRLTHKEFRVGYGRLVAPLTTPSIRD 747
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|813125413|ref|XP_012196702.1| (hypothetical protein SPRG_02722 [Saprolegnia parasitica CBS 223.65] >gi|641538413|gb|KDO32244.1| hypothetical protein SPRG_02722 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 144.436 bits (363), Expect = 6.229e-36 Identity = 75/180 (41.67%), Postives = 103/180 (57.22%), Query Frame = 0
Query: 7 SRQVTHLFGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCL 186
+ + H+F ++HYAG VAY T GF +KN+DTL E A L S ++F+++L K P P++A + R+ GG + SV + F+ QL LM+ + T Y+RCLKPNDKN FN RI +QL+ GGVLEAVRV R+GYPVR+ H++F RYR L
Sbjct: 572 TEKANHIFAIQHYAGWVAYETYGFCEKNKDTLHSELALLVKHSGNAFLRTLVKDETPA-------PTTAKHNKQRQ------------GGILKKGAAAKTSVGTHFRTQLRSLMTTIQSTSCSYVRCLKPNDKNTKGLFNAQRICDQLKAGGVLEAVRVNRAGYPVRITHAQFIKRYRSL 732
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|669169429|ref|XP_008620063.1| (hypothetical protein SDRG_15662 [Saprolegnia diclina VS20] >gi|530728242|gb|EQC26484.1| hypothetical protein SDRG_15662 [Saprolegnia diclina VS20]) HSP 1 Score: 141.354 bits (355), Expect = 8.063e-35 Identity = 75/180 (41.67%), Postives = 98/180 (54.44%), Query Frame = 0
Query: 7 SRQVTHLFGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGGTPSSSLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCL 186
+ + H+F ++HYAG VAY T GF +KN+DTL E L S ++F++ L K P A + H G +G T SV + F+ QL LMS + T Y+RCLKPNDKN FN RI +QL+ GGVLEAVRV R+GYPVR+ H++F RYR L
Sbjct: 572 TEKANHIFAIQHYAGWVAYETYGFCEKNKDTLHSELTLLIKHSGNAFLRKLVKDETPAPVVA------------KNKQRHGGLLKKGAAAKT--------SVGTHFRTQLRSLMSTIQSTSCSYVRCLKPNDKNTKGLFNAQRICDQLKAGGVLEAVRVNRAGYPVRITHAQFIKRYRSL 731
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|698824461|ref|XP_009845259.1| (hypothetical protein H257_17978 [Aphanomyces astaci] >gi|574099655|gb|ETV65258.1| hypothetical protein H257_17978 [Aphanomyces astaci]) HSP 1 Score: 141.354 bits (355), Expect = 8.902e-35 Identity = 87/207 (42.03%), Postives = 116/207 (56.04%), Query Frame = 0
Query: 9 QVTHLFGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGG-TPSS---SLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLAVALALPPSRSPSLPHVIDAVRDPL 211
+ H+F + HYAG V+Y+T GF DKN+DTL E AAL S F++++ + A +PS+A S+ RGG +PSS S S SV S F++QL +LM V T+ Y+RCLKPNDKN P F+ RI +QL GGVLEAVRV R+G+PVR+ H++F RYR P + L H+ D D L
Sbjct: 588 RANHMFAIHHYAGWVSYHTFGFCDKNKDTLHAEIAALVRHSSFGFLRTI-------SSSKADSPSAARST-------------RGGILKPSPSSMAISKASASVGSTFRRQLKQLMDTVQHTQCAYVRCLKPNDKNKPTVFDFRRICDQLEAGGVLEAVRVNRAGFPVRITHAQFVKRYR--------PLTPGGMLKHIPDTCGDEL 766
BLAST of EWM26874.1 vs. NCBI_GenBank
Match: gi|698824481|ref|XP_009845269.1| (hypothetical protein H257_17982 [Aphanomyces astaci] >gi|574099665|gb|ETV65268.1| hypothetical protein H257_17982 [Aphanomyces astaci]) HSP 1 Score: 140.969 bits (354), Expect = 1.139e-34 Identity = 87/205 (42.44%), Postives = 115/205 (56.10%), Query Frame = 0
Query: 11 THLFGVRHYAGEVAYNTQGFLDKNRDTLPKETAALFLSSDSSFVQSLFKGSPPTGAGAASTPSSAASSPLRRSASHTGAGGRGGGGG-TPSS---SLTSLSVSSQFKQQLLELMSKVHRTRPHYIRCLKPNDKNVPDTFNRFRITEQLRYGGVLEAVRVARSGYPVRLVHSEFYARYRCLAVALALPPSRSPSLPHVIDAVRDPL 211
H+F + HYAG V+Y+T GF DKN+DTL E AAL S F++++ + A +PS+A S+ RGG +PSS S S SV S F++QL +LM V T+ Y+RCLKPNDKN P F+ RI +QL GGVLEAVRV R+G+PVR+ H++F RYR P + L H+ D D L
Sbjct: 590 NHMFAIHHYAGWVSYHTFGFCDKNKDTLHAEIAALVRHSSFGFLRTI-------SSSKADSPSAARST-------------RGGILKPSPSSMAISKASASVGSTFRRQLKQLMDTVQHTQCAYVRCLKPNDKNKPTVFDFRRICDQLEAGGVLEAVRVNRAGFPVRITHAQFVKRYR--------PLTPGGMLKHIPDTCGDEL 766 The following BLAST results are available for this feature:
BLAST of EWM26874.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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