EWM26876.1, cds3797 (CDS) Nannochloropsis gaditana

Overview
NameEWM26876.1
Unique Namecds3797
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:99800..100645 +

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Properties
Property NameValue
Protein idEWM26876.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100576g2.2312.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:99800..100645 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26876.1 vs. NCBI_GenBank
Match: gi|585108988|gb|EWM26876.1| (hypothetical protein Naga_100576g2 [Nannochloropsis gaditana])

HSP 1 Score: 565.459 bits (1456), Expect = 0.000e+0
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 
Query:    1 MARCFVDCTGPAISPSPSKLVFLTIMLCFVTSFALQRHDPTLSVSCSASSPPSSSSSPTNSAQSSPFPPPSLPRVRGPRELGRMLEEEKTRALAQEREADERRFQFETEMDAEGIRRPRDRKLSFTPAPAFLSSSHVRERPGGKGSADTKARMNIEPMATGGMAAAEEEGELAIDRHMLRKAYEVRRAQVESLSRFQSKRKRHGRQSGQVGAQGRIVGGDGEKKMGEGFLLMGGGRGEGRGGKGPISISQRHHRTYFSNAHRIRRGRHSFVYASSFRTGPL 281
            MARCFVDCTGPAISPSPSKLVFLTIMLCFVTSFALQRHDPTLSVSCSASSPPSSSSSPTNSAQSSPFPPPSLPRVRGPRELGRMLEEEKTRALAQEREADERRFQFETEMDAEGIRRPRDRKLSFTPAPAFLSSSHVRERPGGKGSADTKARMNIEPMATGGMAAAEEEGELAIDRHMLRKAYEVRRAQVESLSRFQSKRKRHGRQSGQVGAQGRIVGGDGEKKMGEGFLLMGGGRGEGRGGKGPISISQRHHRTYFSNAHRIRRGRHSFVYASSFRTGPL
Sbjct:    1 MARCFVDCTGPAISPSPSKLVFLTIMLCFVTSFALQRHDPTLSVSCSASSPPSSSSSPTNSAQSSPFPPPSLPRVRGPRELGRMLEEEKTRALAQEREADERRFQFETEMDAEGIRRPRDRKLSFTPAPAFLSSSHVRERPGGKGSADTKARMNIEPMATGGMAAAEEEGELAIDRHMLRKAYEVRRAQVESLSRFQSKRKRHGRQSGQVGAQGRIVGGDGEKKMGEGFLLMGGGRGEGRGGKGPISISQRHHRTYFSNAHRIRRGRHSFVYASSFRTGPL 281
[Close]
BLAST of EWM26876.1 vs. NCBI_GenBank
Match: gi|553187378|ref|XP_005854599.1| (hypothetical protein NGA_0195600 [Nannochloropsis gaditana CCMP526] >gi|422294465|gb|EKU21765.1| hypothetical protein NGA_0195600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 418.698 bits (1075), Expect = 3.391e-145
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0 
Query:    1 MARCFVDCTGPAISPSPSKLVFLTIMLCFVTSFALQRHDPTLSVSCSASSPPSSSSSPTNSAQSSPFPPPSLPRVRGPRELGRMLEEEKTRALAQEREADERRFQFETEMDAEGIRRPRDRKLSFTPAPAFLSSSHVRERPGGKGSADTKARMNIEPMATGGMAAAEEEGELAIDRHMLRKAYEVRRAQVESLSRFQSKRKRHGRQSGQV 210
            MARCFVDCTGPAISPSPSKLVFLTIMLCFVTSFALQRHDPTLSVSCSASSPPSSSSSPTNSAQSSPFPPPSLPRVRGPRELGRMLEEEKTRALAQEREADERRFQFETEMDAEGIRRPRDRKLSFTPAPAFLSSSHVRERPGGKGSADTKARMNIEPMATGGMAAAEEEGELAIDRHMLRKAYEVRRAQVESLSRFQSKRKRHGRQSGQ 
Sbjct:    1 MARCFVDCTGPAISPSPSKLVFLTIMLCFVTSFALQRHDPTLSVSCSASSPPSSSSSPTNSAQSSPFPPPSLPRVRGPRELGRMLEEEKTRALAQEREADERRFQFETEMDAEGIRRPRDRKLSFTPAPAFLSSSHVRERPGGKGSADTKARMNIEPMATGGMAAAEEEGELAIDRHMLRKAYEVRRAQVESLSRFQSKRKRHGRQSGQT 210
The following BLAST results are available for this feature:
BLAST of EWM26876.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585108988|gb|EWM26876.1|0.000e+0100.00hypothetical protein Naga_100576g2 [Nannochloropsi... [more]
gi|553187378|ref|XP_005854599.1|3.391e-14599.52hypothetical protein NGA_0195600 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3806rna3806Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications