EWM26878.1, cds3796 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26878.1 vs. NCBI_GenBank
Match: gi|585108990|gb|EWM26878.1| (hypothetical protein Naga_100576g3 [Nannochloropsis gaditana]) HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0
Query: 1 MGMSTQGVVDGRILAQQSTPHIYLTHGALISHRGLPSSILAFVMVLFGGRGGGAGRGAVSGPAPSSTLSDRFDRLHVKSTAAFTGGGRDVRRTQVQMTQQQKRNAAQAAFRGQTVQVVLPKQQLQRGGIRVGGRGVGGSRGVAGVASRAGGGRGGVRGRGGRGAGRGRGGGRGRGRGAGRGGGRGGGKKVGKEDLDAEMDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYWEAKEKAAAGAGAGTATETERESIERGSKVSRGGSGIIPQEWLLPGVRTSKNDVPRPLLSL 292
MGMSTQGVVDGRILAQQSTPHIYLTHGALISHRGLPSSILAFVMVLFGGRGGGAGRGAVSGPAPSSTLSDRFDRLHVKSTAAFTGGGRDVRRTQVQMTQQQKRNAAQAAFRGQTVQVVLPKQQLQRGGIRVGGRGVGGSRGVAGVASRAGGGRGGVRGRGGRGAGRGRGGGRGRGRGAGRGGGRGGGKKVGKEDLDAEMDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYWEAKEKAAAGAGAGTATETERESIERGSKVSRGGSGIIPQEWLLPGVRTSKNDVPRPLLSL
Sbjct: 1 MGMSTQGVVDGRILAQQSTPHIYLTHGALISHRGLPSSILAFVMVLFGGRGGGAGRGAVSGPAPSSTLSDRFDRLHVKSTAAFTGGGRDVRRTQVQMTQQQKRNAAQAAFRGQTVQVVLPKQQLQRGGIRVGGRGVGGSRGVAGVASRAGGGRGGVRGRGGRGAGRGRGGGRGRGRGAGRGGGRGGGKKVGKEDLDAEMDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYWEAKEKAAAGAGAGTATETERESIERGSKVSRGGSGIIPQEWLLPGVRTSKNDVPRPLLSL 292
BLAST of EWM26878.1 vs. NCBI_GenBank
Match: gi|553187372|ref|XP_005854597.1| (hypothetical protein NGA_0195400, partial [Nannochloropsis gaditana CCMP526] >gi|422294463|gb|EKU21763.1| hypothetical protein NGA_0195400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 176.792 bits (447), Expect = 6.132e-53 Identity = 91/91 (100.00%), Postives = 91/91 (100.00%), Query Frame = 0
Query: 44 MVLFGGRGGGAGRGAVSGPAPSSTLSDRFDRLHVKSTAAFTGGGRDVRRTQVQMTQQQKRNAAQAAFRGQTVQVVLPKQQLQRGGIRVGGR 134
MVLFGGRGGGAGRGAVSGPAPSSTLSDRFDRLHVKSTAAFTGGGRDVRRTQVQMTQQQKRNAAQAAFRGQTVQVVLPKQQLQRGGIRVGGR
Sbjct: 1 MVLFGGRGGGAGRGAVSGPAPSSTLSDRFDRLHVKSTAAFTGGGRDVRRTQVQMTQQQKRNAAQAAFRGQTVQVVLPKQQLQRGGIRVGGR 91
BLAST of EWM26878.1 vs. NCBI_GenBank
Match: gi|553187375|ref|XP_005854598.1| (hypothetical protein NGA_0195500 [Nannochloropsis gaditana CCMP526] >gi|422294464|gb|EKU21764.1| hypothetical protein NGA_0195500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 111.694 bits (278), Expect = 6.893e-28 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
Query: 199 MDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYWEAKEKAAAGAGAGTATETE 251
MDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYWEAKEKAAAGAGAGTATETE
Sbjct: 1 MDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYWEAKEKAAAGAGAGTATETE 53
BLAST of EWM26878.1 vs. NCBI_GenBank
Match: gi|298706786|emb|CBJ29709.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 60.077 bits (144), Expect = 4.350e-7 Identity = 35/65 (53.85%), Postives = 40/65 (61.54%), Query Frame = 0
Query: 187 GKKVGKE-DLDAEMDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYW-EAKEKAAAGAGAGTATE 249
GKK KE DLD +DEY FKAGKGPDPK+ ASLD +DSYW +A +K A AG E
Sbjct: 150 GKKAAKETDLDEGLDEYWFKAGKGPDPKV-------ASLDRGLDSYWSKATDKTNGDAAAGDKME 207
BLAST of EWM26878.1 vs. NCBI_GenBank
Match: gi|1214710595|gb|OWZ21670.1| (hypothetical protein PHMEG_0003759 [Phytophthora megakarya]) HSP 1 Score: 59.6918 bits (143), Expect = 6.309e-7 Identity = 33/59 (55.93%), Postives = 36/59 (61.02%), Query Frame = 0
Query: 189 KVGKEDLDAEMDEYHFKAGKGPDPKIAQAERKKASLDTEMDSYWEAKEKAAAGAGAGTA 247
K EDLD EMDEY +AGKGPDPK AQ LD +M+ YW AK A GA A TA
Sbjct: 169 KAKPEDLDMEMDEYWHEAGKGPDPKAAQ-------LDRQMEEYWAAKP-AQGGAAAPTA 219 The following BLAST results are available for this feature:
BLAST of EWM26878.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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