EWM26880.1, cds3793 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|585108995|gb|EWM26880.1| (cytosol-type hsp70 [Nannochloropsis gaditana]) HSP 1 Score: 421.394 bits (1082), Expect = 3.715e-149 Identity = 207/207 (100.00%), Postives = 207/207 (100.00%), Query Frame = 0 Query: 1 MCPRISTGADFDYCLANHLLATYGDITFSASSSSSSSSASTFTTSSNEDRNVKGTKEVMAFEDEEDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACVVD 207 MCPRISTGADFDYCLANHLLATYGDITFSASSSSSSSSASTFTTSSNEDRNVKGTKEVMAFEDEEDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACVVD Sbjct: 1 MCPRISTGADFDYCLANHLLATYGDITFSASSSSSSSSASTFTTSSNEDRNVKGTKEVMAFEDEEDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACVVD 207
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|397599086|gb|EJK57343.1| (hypothetical protein THAOC_22622 [Thalassiosira oceanica]) HSP 1 Score: 101.679 bits (252), Expect = 8.759e-25 Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 0 Query: 131 FEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACVVD 207 +++A + ++ R+L P+ R L+ G+GRDEIDEVVMVGGTTR+P+IRE++R + V+ +N IDPD+TVA GAA V+D Sbjct: 6 YDQAVETLYERSLLPISRLLKEQGLGRDEIDEVVMVGGTTRMPQIRELVRKEMAVDKINVSIDPDLTVAYGAASVID 82
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|397611305|gb|EJK61274.1| (hypothetical protein THAOC_18273 [Thalassiosira oceanica]) HSP 1 Score: 109.768 bits (273), Expect = 2.871e-24 Identity = 70/214 (32.71%), Postives = 116/214 (54.21%), Query Frame = 0 Query: 8 GADFDYCLANHLLATYGDITFSASSSSSSSSASTFTTSSNEDRNVKGTKEVMAFEDEEDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRIS-----TAASSSFSC--------LSQGGTGSQSDSFVQ-NVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACVVD 207 GADFD +A+ LL G + + + ++ +E NV ++ E+ S PL C+ +L +I E +K R+S T+ + C ++ G ++ ++ ++S+S +++A + ++ R+L P+ R L+ G+GRDEIDEVVMVGGTTR+P+IRE++R + V+ +N IDPD+TVA GAA V+D Sbjct: 460 GADFDAAVAHWLLEKKGAAEIVRAMADAIATIEDSLVGVDETSNV----------EDSFEKHCPKLSQVPL--CTKSSLHTIGERMKIRLSEHPGETSYEVNEPCYRLPASLGVAPGTANELCEAIIEVSLSMSLGEYDQAVETLYERSLLPISRLLKEQGLGRDEIDEVVMVGGTTRMPQIRELVRKEMAVDKINVSIDPDLTVAYGAASVID 661
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|676389739|ref|XP_009038148.1| (hypothetical protein AURANDRAFT_11914, partial [Aureococcus anophagefferens] >gi|323451026|gb|EGB06904.1| hypothetical protein AURANDRAFT_11914, partial [Aureococcus anophagefferens]) HSP 1 Score: 103.219 bits (256), Expect = 1.500e-22 Identity = 61/131 (46.56%), Postives = 83/131 (63.36%), Query Frame = 0 Query: 74 SSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQ-NVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAA 203 + PL C+ + L S+ E LK +S AAS+ +CL+ D V+ + +R FEKAC +F RA+ V R L+ + +IDEVVMVGGT+R+P++R+ LR HL V+ LNT IDPDVTVAVGAA Sbjct: 261 AREPL--CARHVLASMGERLKIAVSDAASADAACLAPR---ESCDDLVRVEFAYTRKRFEKACDHLFVRAIDTVARTLDEGMLTHRDIDEVVMVGGTSRVPRVRDTLRDHLRVDKLNTEIDPDVTVAVGAA 386
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|219118255|ref|XP_002179906.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408959|gb|EEC48892.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 93.9745 bits (232), Expect = 2.060e-19 Identity = 51/125 (40.80%), Postives = 79/125 (63.20%), Query Frame = 0 Query: 83 SYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACVVD 207 S L S+ + L + S S +S G + +F +S++ +E++ + ++AR++SPV R L + D++DEVVMVGGTTRIP+IR++++ L S+NTHIDPD+TVA GAA V+D Sbjct: 208 SQALQSLVQALPSNVDLEDQLSASYVSLEGFCTDLTTF--RLSLTSREYEQSVQALYARSISPVTRLLNDLNLRHDDVDEVVMVGGTTRIPQIRKLVQQALPSASVNTHIDPDITVAYGAASVID 330
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|1129171093|gb|OLP81155.1| (78 kDa glucose-regulated protein-like [Symbiodinium microadriaticum]) HSP 1 Score: 95.5153 bits (236), Expect = 2.711e-19 Identity = 54/144 (37.50%), Postives = 83/144 (57.64%), Query Frame = 0 Query: 65 EDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLN-VESLNTHIDPDVTVAVGAACVVD 207 E ++ S+ S C S L +AE +K ++S A+ + C GG + + V+R FE+A ++F RA++PV + LE M ID+VV+VGG +R+PK+RE+L+ + L+T IDPD+TVA GAA V+D Sbjct: 412 ERQEASASSGGVAKERCDSSGLHILAEAVKIKLSNASEAETICRDSGGID-------RVLVVTRTEFEEAAAELFGRAMAPVQKVLEDQMMKAAHIDDVVLVGGASRMPKLRELLQEFFGPTKRLHTEIDPDITVAWGAASVLD 548
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|698788482|ref|XP_009827273.1| (hypothetical protein H257_04453 [Aphanomyces astaci] >gi|574118362|gb|ETV83843.1| hypothetical protein H257_04453 [Aphanomyces astaci]) HSP 1 Score: 93.9745 bits (232), Expect = 5.046e-19 Identity = 53/136 (38.97%), Postives = 76/136 (55.88%), Query Frame = 0 Query: 69 PSSPSSSSP-LHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAA 203 P +S P + C++ + +AE LK+++S SC+ Q GS + V + ++R +E C R ++PV LE N M D+IDEVV+VGG++RIP I+ L E N+HIDPDV VAVGAA Sbjct: 285 PDLQTSDEPNVFPCTAAGIRGVAEQLKRQLSFDVEGEASCVVQEAVGSVAVGDVLRLRMTRSEWEALCLPTLQRTMAPVKEVLEGNMMTTDDIDEVVLVGGSSRIPWIQAQLAQMFGREP-NSHIDPDVAVAVGAA 419
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|813150545|ref|XP_012200919.1| (hypothetical protein SPRG_06720 [Saprolegnia parasitica CBS 223.65] >gi|641534534|gb|KDO28481.1| hypothetical protein SPRG_06720 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 93.2041 bits (230), Expect = 9.002e-19 Identity = 62/196 (31.63%), Postives = 96/196 (48.98%), Query Frame = 0 Query: 8 GADFDYCLANHLLATYGDITFSASSSSSSSSASTFTTSSNEDRNVKGTKEVMAFEDEEDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAA 203 G D D LA HL+A + ++ ++ + ST +S+E S+ P C+ + +AE LK+ +S S++ SC+ + T + + V ++R +E + +R L+P+ L+ NGM +IDEVV+VGG++RIP I+ L A E N HIDPDV VAVGAA Sbjct: 259 GEDLDDVLATHLVARFEELL----ATPALPPLSTLARTSDE-------------------------SAFP---CTVSGMRGVAEKLKRDLSALPSAAASCVIEASTAQHAAGSLATVEMTRQEWEALVAPMLSRTLTPIHDMLDGNGMAPTDIDEVVLVGGSSRIPWIQHALAALFGREP-NAHIDPDVAVAVGAA 421
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|298707504|emb|CBJ30106.1| (Similarities to Heat shock protein 70-probable alternative splicing [Ectocarpus siliculosus]) HSP 1 Score: 93.5893 bits (231), Expect = 9.014e-19 Identity = 63/229 (27.51%), Postives = 101/229 (44.10%), Query Frame = 0 Query: 8 GADFDYCLANHLLATYGDITFSASSSSSSSSASTFTTSSNEDRNVKGTKEVMAFEDEEDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCL-------------------SQGGTGSQSDSFVQ------------NVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAACV 205 G+DFD C+A HLL D + A + + + FTT + C+ + L ++E L++ ++ +++ C+ S+ G + F ++ ++R +E++C +F R ++PVDR L + DEIDEVVMVGG TR P++R +L +HL V+ LN IDPDV VA GAA + Sbjct: 257 GSDFDQCVA-HLLERKLDRSIVALEEAEDAVSCGFTTPT----------------------------------CALHNLYPLSEGLRRLLTDGETAAVECMIPPEEAQRRNLRSPKKGTPSEDGDSQDAHRFAGAEGERCKMWNSLSLELTRTEYEQSCASLFDRGVAPVDRLLHHLDLTVDEIDEVVMVGGMTRTPRVRSLLESHLGVDRLNVDIDPDVVVAYGAATI 450
BLAST of EWM26880.1 vs. NCBI_GenBank
Match: gi|669171295|ref|XP_008620996.1| (hypothetical protein SDRG_16559 [Saprolegnia diclina VS20] >gi|530727347|gb|EQC25589.1| hypothetical protein SDRG_16559 [Saprolegnia diclina VS20]) HSP 1 Score: 92.4337 bits (228), Expect = 2.460e-18 Identity = 63/196 (32.14%), Postives = 95/196 (48.47%), Query Frame = 0 Query: 8 GADFDYCLANHLLATYGDITFSASSSSSSSSASTFTTSSNEDRNVKGTKEVMAFEDEEDEQPSSPSSSSPLHSCSSYTLLSIAEHLKKRISTAASSSFSCLSQGGTGSQSDSFVQNVSVSRDGFEKACKDVFARALSPVDRCLESNGMGRDEIDEVVMVGGTTRIPKIREMLRAHLNVESLNTHIDPDVTVAVGAA 203 G D D LA HL+A + + + + + SS A T S +S+ P C+ + +AE LK+ +S S++ SC+ + T + + + ++R +E + +R LSP+ L NGM ++DEVV+VGG++RIP I+E L A E N HIDPDV VAVGAA Sbjct: 295 GEDLDDVLATHLVARFEALLATPALPALSSLART-----------------------------SDASAFP---CTVSGMRGVAEKLKRDLSATPSAAASCVVEAATPQHAAGDLATLEMTRVEWEALVAPLLSRTLSPIHEMLSGNGMAPSDVDEVVLVGGSSRIPWIQEALGALFGREP-NAHIDPDVAVAVGAA 457 The following BLAST results are available for this feature:
BLAST of EWM26880.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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