EWM26889.1, cds3784 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|585109011|gb|EWM26889.1| (transmembrane protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 429.869 bits (1104), Expect = 3.243e-152 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
Query: 1 MGMLDGAAASSPRLARAAPSHLLVFHNMPPSCPAVELPSVSKMSSSQATTIPRRRVLTRIPSMGGFSLPSTSFLSSSSPPCGRSSRALGRGLTFLLIGTFLLGFVHFVKAETQETPEVGSRDGNVAFFRTQTLEEGPLAKEAGAPTTRMNKEEGDRGVEEESLSRGFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAICEGGGGR 215
MGMLDGAAASSPRLARAAPSHLLVFHNMPPSCPAVELPSVSKMSSSQATTIPRRRVLTRIPSMGGFSLPSTSFLSSSSPPCGRSSRALGRGLTFLLIGTFLLGFVHFVKAETQETPEVGSRDGNVAFFRTQTLEEGPLAKEAGAPTTRMNKEEGDRGVEEESLSRGFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAICEGGGGR
Sbjct: 1 MGMLDGAAASSPRLARAAPSHLLVFHNMPPSCPAVELPSVSKMSSSQATTIPRRRVLTRIPSMGGFSLPSTSFLSSSSPPCGRSSRALGRGLTFLLIGTFLLGFVHFVKAETQETPEVGSRDGNVAFFRTQTLEEGPLAKEAGAPTTRMNKEEGDRGVEEESLSRGFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAICEGGGGR 215
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|325303602|tpg|DAA34276.1| (TPA_inf: membrane protein [Amblyomma variegatum]) HSP 1 Score: 67.3958 bits (163), Expect = 4.104e-11 Identity = 29/46 (63.04%), Postives = 39/46 (84.78%), Query Frame = 0
Query: 167 FWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAICEGG 212
FW FL ++S+I+V+ELGD+TFFIAA+LAMR+ RL++FGGAI G
Sbjct: 59 FWHGFLGAISVIIVSELGDQTFFIAAILAMRHSRLVVFGGAIAALG 104
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|1036690503|ref|XP_017026218.1| (PREDICTED: uncharacterized protein LOC108077422 isoform X1 [Drosophila kikkawai] >gi|1036690514|ref|XP_017026226.1| PREDICTED: uncharacterized protein LOC108077422 isoform X1 [Drosophila kikkawai]) HSP 1 Score: 70.8626 bits (172), Expect = 9.458e-11 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
Query: 143 GAPTTRMNKEEGDRGVEEESLSRG-FWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIC 209
PT N + + E S S+G F AF S+S+IL+TELGDKTFFIAA++AMR+ RL++FGGAI
Sbjct: 69 NKPTDLSNLADKQKEATERSKSKGNFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIA 136
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|545713987|ref|XP_005709296.1| (hypothetical protein Gasu_01380 [Galdieria sulphuraria] >gi|452825781|gb|EME32776.1| hypothetical protein Gasu_01380 [Galdieria sulphuraria]) HSP 1 Score: 70.4774 bits (171), Expect = 9.626e-11 Identity = 39/82 (47.56%), Postives = 52/82 (63.41%), Query Frame = 0
Query: 130 TQTLEEGPLAKEAGAPTTRMN--KEEGDRGVEEESLSRGFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIC 209
T+T G LA+E +++ E DR R F P+F+ SL MILVTELGDKTFFIAA++AM+ R+L+F GA+C
Sbjct: 65 TRTSVTGDLAEETTKGISKLFPFLERMDR--------RAFLPSFIQSLFMILVTELGDKTFFIAAIMAMKNSRILVFQGALC 138
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|298707549|emb|CBJ30133.1| (transmembrane protein TPARL, putative [Ectocarpus siliculosus]) HSP 1 Score: 69.707 bits (169), Expect = 1.022e-10 Identity = 34/66 (51.52%), Postives = 46/66 (69.70%), Query Frame = 0
Query: 143 GAPTTRMNKEEGDRGVEEESLSRGFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAI 208
G+ + MN+ G E E GFW AF NS++MI+ TE+GDKTFFIAA++AM + RL +FGGA+
Sbjct: 25 GSSSGDMNENAVSAG-EGEPPQVGFWTAFANSVAMIIATEIGDKTFFIAAIMAMSHPRLAVFGGAV 89
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|1036690536|ref|XP_017026245.1| (PREDICTED: uncharacterized protein LOC108077422 isoform X3 [Drosophila kikkawai]) HSP 1 Score: 70.0922 bits (170), Expect = 1.594e-10 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 0
Query: 145 PTTRMNKEEGDRGVEEESLSRG-FWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIC 209
PT N + + E S S+G F AF S+S+IL+TELGDKTFFIAA++AMR+ RL++FGGAI
Sbjct: 71 PTDLSNLADKQKEATERSKSKGNFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIA 136
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|242003375|ref|XP_002422716.1| (transmembrane protein TPARL, putative [Pediculus humanus corporis] >gi|212505538|gb|EEB09978.1| transmembrane protein TPARL, putative [Pediculus humanus corporis]) HSP 1 Score: 69.3218 bits (168), Expect = 1.737e-10 Identity = 31/43 (72.09%), Postives = 39/43 (90.70%), Query Frame = 0
Query: 166 GFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAI 208
GF+PAF+ S S+I+V+ELGDKTFFIAA++AMRY RL +FGGAI
Sbjct: 62 GFFPAFVASFSVIIVSELGDKTFFIAAIMAMRYPRLTVFGGAI 104
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|321464633|gb|EFX75640.1| (hypothetical protein DAPPUDRAFT_231233 [Daphnia pulex]) HSP 1 Score: 68.9366 bits (167), Expect = 1.948e-10 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 0
Query: 94 FLLIGTFLLGFVHFVKAETQETPEVGSRDGNVAFFRTQTLEEGPLAKEAGAPTTRMNKEEGDRGVEEESLSRGFWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAI 208
FLL+ V+ V A+ + P S++ N ++E G +KE MN GF AFL SLS+I+V+ELGDKTFFIAA++AMR+ RL++F GAI
Sbjct: 12 FLLLSIIFALLVYQVYADKE--PHEDSKEDN-------SIENGKNSKEIKGTEAPMN-------------DLGFAHAFLASLSVIIVSELGDKTFFIAAIMAMRHSRLVVFSGAI 104
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|1036690525|ref|XP_017026236.1| (PREDICTED: transmembrane protein 165 isoform X2 [Drosophila kikkawai]) HSP 1 Score: 68.9366 bits (167), Expect = 2.373e-10 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = 0
Query: 141 EAGAPTTRMNKEEGDRGVEEESLSRG-FWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAI 208
+ PT N + + E S S+G F AF S+S+IL+TELGDKTFFIAA++AMR+ RL++FGGAI
Sbjct: 67 DLNKPTDLSNLADKQKEATERSKSKGNFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAI 135
BLAST of EWM26889.1 vs. NCBI_GenBank
Match: gi|1189095606|ref|XP_020813355.1| (uncharacterized protein LOC110188119 isoform X1 [Drosophila serrata] >gi|1189095608|ref|XP_020813356.1| uncharacterized protein LOC110188119 isoform X1 [Drosophila serrata]) HSP 1 Score: 69.707 bits (169), Expect = 2.374e-10 Identity = 36/70 (51.43%), Postives = 48/70 (68.57%), Query Frame = 0
Query: 141 EAGAPTTRMNKEEGDRGVEEESLSRG-FWPAFLNSLSMILVTELGDKTFFIAAVLAMRYDRLLIFGGAIC 209
+ PT N + + E S S+G F AF S+S+IL+TELGDKTFFIAA++AMR+ RL++FGGAI
Sbjct: 67 DINKPTDLSNLADKQKESTERSKSKGTFIDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIA 136 The following BLAST results are available for this feature:
BLAST of EWM26889.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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