EWM26891.1, cds3783 (CDS) Nannochloropsis gaditana

Overview
NameEWM26891.1
Unique Namecds3783
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:66406..66456 +
Alignment locationCM002462.1:66607..67461 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26891.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100690g1.447.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:66406..66456 +
CM002462.1supercontigCM002462.1:66607..67461 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005730nucleolus
Homology
[Close]
BLAST of EWM26891.1 vs. NCBI_GenBank
Match: gi|585109015|gb|EWM26891.1| (hypothetical protein Naga_100690g1 [Nannochloropsis gaditana])

HSP 1 Score: 560.451 bits (1443), Expect = 0.000e+0
Identity = 301/301 (100.00%), Postives = 301/301 (100.00%), Query Frame = 0 
Query:    1 MKIPELQLLGDVLAFLKSKGFVKTAATLIKEGKGKGALSLSTGSRDLLDLYVKAVGVVPRPETPSSSSDDDSDSSSSSESEEKGEARKRDVKGPITPALKKRQAAAALTTPAAASSSSSSSSSSSSSSSSSSESENEEDRKSHKELSEKQNTPSQMNGTAKGASSSSSSSSEEEEEEEAETTIPTKKLSNTAHSTRLRPASKPLPSKTEASSSSSSSSSSSGESSSESESASEEEEKAAAPATKKSLPSHKRKAADMSSSSSSDSSSNEEEEEEGKEEEEERKRKNSPPAKGGKWRVLRRI 301
            MKIPELQLLGDVLAFLKSKGFVKTAATLIKEGKGKGALSLSTGSRDLLDLYVKAVGVVPRPETPSSSSDDDSDSSSSSESEEKGEARKRDVKGPITPALKKRQAAAALTTPAAASSSSSSSSSSSSSSSSSSESENEEDRKSHKELSEKQNTPSQMNGTAKGASSSSSSSSEEEEEEEAETTIPTKKLSNTAHSTRLRPASKPLPSKTEASSSSSSSSSSSGESSSESESASEEEEKAAAPATKKSLPSHKRKAADMSSSSSSDSSSNEEEEEEGKEEEEERKRKNSPPAKGGKWRVLRRI
Sbjct:    1 MKIPELQLLGDVLAFLKSKGFVKTAATLIKEGKGKGALSLSTGSRDLLDLYVKAVGVVPRPETPSSSSDDDSDSSSSSESEEKGEARKRDVKGPITPALKKRQAAAALTTPAAASSSSSSSSSSSSSSSSSSESENEEDRKSHKELSEKQNTPSQMNGTAKGASSSSSSSSEEEEEEEAETTIPTKKLSNTAHSTRLRPASKPLPSKTEASSSSSSSSSSSGESSSESESASEEEEKAAAPATKKSLPSHKRKAADMSSSSSSDSSSNEEEEEEGKEEEEERKRKNSPPAKGGKWRVLRRI 301
The following BLAST results are available for this feature:
BLAST of EWM26891.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109015|gb|EWM26891.1|0.000e+0100.00hypothetical protein Naga_100690g1 [Nannochloropsi... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3792rna3792Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications