EWM26892.1, cds3781 (CDS) Nannochloropsis gaditana

Overview
NameEWM26892.1
Unique Namecds3781
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:58164..58196 +
Alignment locationCM002462.1:58488..58628 +
Alignment locationCM002462.1:59179..59232 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26892.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100872g1.5029.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:58164..58196 +
CM002462.1supercontigCM002462.1:58488..58628 +
CM002462.1supercontigCM002462.1:59179..59232 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26892.1 vs. NCBI_GenBank
Match: gi|585109018|gb|EWM26892.1| (hypothetical protein Naga_100872g1 [Nannochloropsis gaditana])

HSP 1 Score: 154.066 bits (388), Expect = 1.729e-47
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 
Query:    1 MLDNLQLFEAKVGKLRCLEALGDYPSLLVEATRLKNTLLAAGSKPVTEEGQPREWAGWTFQPGSALPPFAVDRDT 75
            MLDNLQLFEAKVGKLRCLEALGDYPSLLVEATRLKNTLLAAGSKPVTEEGQPREWAGWTFQPGSALPPFAVDRDT
Sbjct:    1 MLDNLQLFEAKVGKLRCLEALGDYPSLLVEATRLKNTLLAAGSKPVTEEGQPREWAGWTFQPGSALPPFAVDRDT 75
The following BLAST results are available for this feature:
BLAST of EWM26892.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109018|gb|EWM26892.1|1.729e-47100.00hypothetical protein Naga_100872g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3790rna3790Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications