EWM26898.1, cds3779 (CDS) Nannochloropsis gaditana

Overview
NameEWM26898.1
Unique Namecds3779
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:45177..45270 +
Alignment locationCM002462.1:45509..45571 +
Alignment locationCM002462.1:45674..45759 +
Alignment locationCM002462.1:45982..46139 +
Alignment locationCM002462.1:46243..46306 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26898.1
Productfucose mutarotase-like protein
Orig transcript idgnl|cribi|Naga_100103g2.7035.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:45177..45270 +
CM002462.1supercontigCM002462.1:45509..45571 +
CM002462.1supercontigCM002462.1:45674..45759 +
CM002462.1supercontigCM002462.1:45982..46139 +
CM002462.1supercontigCM002462.1:46243..46306 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0003824catalytic activity
GO:0016853isomerase activity
GO:0048029monosaccharide binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0005996monosaccharide metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR023750RbsD-like
IPR007721RbsD_FucU
Homology
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|585109028|gb|EWM26898.1| (fucose mutarotase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 316.235 bits (809), Expect = 2.600e-109
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIGSTGE 154
            MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIGSTGE
Sbjct:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIGSTGE 154          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|167520634|ref|XP_001744656.1| (hypothetical protein [Monosiga brevicollis MX1] >gi|163776987|gb|EDQ90605.1| predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 197.208 bits (500), Expect = 4.165e-62
Identity = 90/153 (58.82%), Postives = 109/153 (71.24%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIGSTG 153
            MT+LK IPK+L P LL  LA MGHGDE+VL DANFP+ S+ +HTP  ++  D      LL AI+Q+LPLD T  P  +MEMM +H+A GWKT IWD YK  V E EGR +    VERF FY R+K+AY V+ATGE A Y N+ILKKG+IGSTG
Sbjct:    1 MTILKGIPKILPPELLFALAKMGHGDELVLGDANFPSESVGAHTPCNVIRCDALGAVDLLKAILQVLPLDTTCGPCALMEMMDMHKAAGWKTPIWDEYKAAVKEAEGRTIDFEEVERFAFYERAKKAYVVVATGEEAFYANIILKKGIIGSTG 153          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|514685980|ref|XP_004990568.1| (RbsD or FucU transporter [Salpingoeca rosetta] >gi|326431654|gb|EGD77224.1| RbsD or FucU transporter [Salpingoeca rosetta])

HSP 1 Score: 186.808 bits (473), Expect = 5.449e-58
Identity = 92/153 (60.13%), Postives = 115/153 (75.16%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIGSTG 153
            MTVLK IP +L P LL  LA MGHGDE+VLADANFPA S+ + TP  ++  D   +P LL+AI++LLPLDET+ P  +M++MP H+A GW+T IW+ Y+ IV+E E R V    VERF FY R+K+A+ V+ATGE ALY NLILKKGVIGSTG
Sbjct:    1 MTVLKGIPSILPPELLLALAKMGHGDELVLADANFPAESVGASTPCSVIRCDALGMPELLSAILKLLPLDETSCPCALMDLMPEHKAAGWQTPIWEQYRAIVAENEKRTVDFELVERFAFYERAKKAFVVVATGEQALYANLILKKGVIGSTG 153          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|340374036|ref|XP_003385545.1| (PREDICTED: fucose mutarotase-like isoform X2 [Amphimedon queenslandica])

HSP 1 Score: 176.792 bits (447), Expect = 4.211e-54
Identity = 86/150 (57.33%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAP-PAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVI 149
            M +LK IP++++P LL VLA MGHGDEIVLADANFP+ASI  H P  L+ +DG+ IP LL AI  LLPLD   P PAM+ME++   +  G KT IW+ YK I+ + EG+++    +ERF FY R+K A+AV+ATGE ALYGN+ILKKGV+
Sbjct:    1 MVILKGIPRIINPSLLSVLARMGHGDEIVLADANFPSASICRHGPE-LIRADGHAIPPLLKAITSLLPLDTYVPRPAMLMELVHNDKKAGLKTPIWEQYKSILQQAEGKDIGFEMIERFAFYERAKTAFAVVATGEEALYGNVILKKGVL 149          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|1126187397|ref|XP_019626459.1| (PREDICTED: fucose mutarotase-like [Branchiostoma belcheri])

HSP 1 Score: 176.407 bits (446), Expect = 5.368e-54
Identity = 89/151 (58.94%), Postives = 112/151 (74.17%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDE-TAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIG 150
            M VLK IP++LSP LL+VLA MGHGDEIVLADANFP +S+ S  P   V +DG+ IP LL A++QLLP+D     PA VM+++P  +  G KT +WDTY+E++ E  G    L  VERF FY R+K+A+AV+ATGETALYGN+ILKKGVI 
Sbjct:    1 MVVLKGIPRILSPELLYVLARMGHGDEIVLADANFPTSSVCSSGPIQ-VRADGHSIPDLLKAVLQLLPMDTYVESPAAVMDLVPGDKEKGLKTPVWDTYRELLKES-GCTAPLEQVERFAFYDRAKKAFAVVATGETALYGNIILKKGVIA 149          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|584011699|ref|XP_006800760.1| (PREDICTED: fucose mutarotase-like [Neolamprologus brichardi])

HSP 1 Score: 172.555 bits (436), Expect = 1.872e-52
Identity = 87/150 (58.00%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAP-PAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVI 149
            M VL+ IP VLSP LL+ LA MGHGDE+VLADANFPA+SI +  P   + +DG  IP L+ A+++LLPLD   P PA VM+++   +  G    +WDTYK+++S+  G  V+L  VERF FY R+K+AYAV+ATGETALYGNLILKKGVI
Sbjct:    1 MVVLRGIPSVLSPELLYALAKMGHGDELVLADANFPASSICACGPKE-IRADGLGIPRLMEAVLKLLPLDTYVPSPAAVMDLVDSDKQRGLAVPVWDTYKQLLSQA-GSQVSLEKVERFAFYERAKKAYAVVATGETALYGNLILKKGVI 148          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|499005345|ref|XP_004555951.1| (PREDICTED: fucose mutarotase isoform X1 [Maylandia zebra] >gi|548430764|ref|XP_005743976.1| PREDICTED: fucose mutarotase isoform X1 [Pundamilia nyererei] >gi|554861298|ref|XP_005940755.1| PREDICTED: fucose mutarotase isoform X1 [Haplochromis burtoni])

HSP 1 Score: 171.014 bits (432), Expect = 8.015e-52
Identity = 86/150 (57.33%), Postives = 111/150 (74.00%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAP-PAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVI 149
            M VL+ IP VLSP LL+ LA MGHGDE+VLADANFPA+SI +  P   + +DG  IP L+ A+++LLPLD   P PA VM+++   +  G    +WDTY++++S+  G  V+L  VERF FY R+K+AYAV+ATGETALYGNLILKKGVI
Sbjct:    1 MVVLRGIPSVLSPELLYALAKMGHGDELVLADANFPASSICACGPKE-IRADGLGIPRLMEAVLKLLPLDTYVPSPAAVMDLVDSDKQRGLAVPVWDTYEQLLSQA-GSQVSLEKVERFAFYERAKKAYAVVATGETALYGNLILKKGVI 148          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|260825905|ref|XP_002607906.1| (hypothetical protein BRAFLDRAFT_114228 [Branchiostoma floridae] >gi|229293256|gb|EEN63916.1| hypothetical protein BRAFLDRAFT_114228 [Branchiostoma floridae])

HSP 1 Score: 170.629 bits (431), Expect = 1.012e-51
Identity = 88/151 (58.28%), Postives = 109/151 (72.19%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDE-TAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIG 150
            M VLK IP++LSP LL VLA MGHGDEIV ADANFP +SI S  P   V +DG+ IP LL A+++LLPLD     PA VM+++P  +  G KT +WDTY+ ++ E  G    L  VERF FY R+K+A+AV+ATGETALYGN+ILKKGVI 
Sbjct:    1 MVVLKGIPRILSPELLFVLARMGHGDEIVFADANFPTSSICSSGPIE-VRADGHCIPALLKAVLELLPLDTYVESPAAVMDLVPGDKEKGLKTPVWDTYRGLLKEA-GSTTPLEQVERFAFYERAKKAFAVVATGETALYGNIILKKGVIA 149          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|1032151582|gb|OAO15137.1| (fucose mutarotase [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 169.859 bits (429), Expect = 1.863e-51
Identity = 86/152 (56.58%), Postives = 108/152 (71.05%), Query Frame = 0
Query:    1 MTVLKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDE-TAPPAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIGS 151
            M VLK I  V++P LL VLA MGH D+IV+ADANFPAASIASH P GL+  DG+DIP +L  I +LLPLD+    PA VM  M   + +  +  I D Y +I+SE EG+ V +  VERFEFY R+K+ YAVIATGET+ Y N+IL+KGVI +
Sbjct:    1 MPVLKGISSVMTPELLKVLAEMGHSDQIVIADANFPAASIASHCPAGLIRLDGHDIPRILHGICKLLPLDQYVECPAQVMAKMECDKDM--EIPIIDEYIKIMSEAEGKEVKVEYVERFEFYERAKKCYAVIATGETSQYANIILQKGVIKN 150          
BLAST of EWM26898.1 vs. NCBI_GenBank
Match: gi|1207975529|ref|XP_021378658.1| (fucose mutarotase-like [Mizuhopecten yessoensis] >gi|1205887322|gb|OWF38304.1| Fucose mutarotase [Mizuhopecten yessoensis])

HSP 1 Score: 168.703 bits (426), Expect = 4.690e-51
Identity = 84/148 (56.76%), Postives = 107/148 (72.30%), Query Frame = 0
Query:    4 LKRIPKVLSPRLLHVLASMGHGDEIVLADANFPAASIASHTPGGLVNSDGNDIPTLLTAIMQLLPLDETAP-PAMVMEMMPVHQALGWKTQIWDTYKEIVSEGEGRNVALTTVERFEFYSRSKQAYAVIATGETALYGNLILKKGVIG 150
            LK IP VLSP LLHVLASMGHGDE+VLADANFP AS+    P   V +DG DIPTL+ AI+QLLPLD     P  +M+++P  +  G +T +W+ Y  I  + EG+ + +  VERF FY R+K+A+AV+ TGETALYGN+ILKKGV+ 
Sbjct:    3 LKLIPNVLSPNLLHVLASMGHGDELVLADANFPTASVCKSGPIE-VRADGIDIPTLMDAILQLLPLDTYVDRPIALMDLVPSDKQRGLQTPVWEKYMTIARKHEGKTIDVQLVERFAFYERAKKAFAVVHTGETALYGNIILKKGVVA 149          
The following BLAST results are available for this feature:
BLAST of EWM26898.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109028|gb|EWM26898.1|2.600e-109100.00fucose mutarotase-like protein [Nannochloropsis ga... [more]
gi|167520634|ref|XP_001744656.1|4.165e-6258.82hypothetical protein [Monosiga brevicollis MX1] >g... [more]
gi|514685980|ref|XP_004990568.1|5.449e-5860.13RbsD or FucU transporter [Salpingoeca rosetta] >gi... [more]
gi|340374036|ref|XP_003385545.1|4.211e-5457.33PREDICTED: fucose mutarotase-like isoform X2 [Amph... [more]
gi|1126187397|ref|XP_019626459.1|5.368e-5458.94PREDICTED: fucose mutarotase-like [Branchiostoma b... [more]
gi|584011699|ref|XP_006800760.1|1.872e-5258.00PREDICTED: fucose mutarotase-like [Neolamprologus ... [more]
gi|499005345|ref|XP_004555951.1|8.015e-5257.33PREDICTED: fucose mutarotase isoform X1 [Maylandia... [more]
gi|260825905|ref|XP_002607906.1|1.012e-5158.28hypothetical protein BRAFLDRAFT_114228 [Branchiost... [more]
gi|1032151582|gb|OAO15137.1|1.863e-5156.58fucose mutarotase [Blastocystis sp. ATCC 50177/Nan... [more]
gi|1207975529|ref|XP_021378658.1|4.690e-5156.76fucose mutarotase-like [Mizuhopecten yessoensis] >... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3788rna3788Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications