EWM26904.1, cds3769 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26904.1 vs. NCBI_GenBank
Match: gi|585109034|gb|EWM26904.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 422.165 bits (1084), Expect = 2.195e-149 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0 Query: 1 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEVCQVRPFSFQNFLMRVSSFY 211 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEVCQVRPFSFQNFLMRVSSFY Sbjct: 1 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEVCQVRPFSFQNFLMRVSSFY 211
BLAST of EWM26904.1 vs. NCBI_GenBank
Match: gi|585109033|gb|EWM26903.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 380.948 bits (977), Expect = 1.915e-130 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0 Query: 1 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE Sbjct: 125 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 315
BLAST of EWM26904.1 vs. NCBI_GenBank
Match: gi|553181303|ref|XP_005853541.1| (hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526] >gi|422295521|gb|EKU22820.1| hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 362.844 bits (930), Expect = 6.654e-123 Identity = 191/226 (84.51%), Postives = 191/226 (84.51%), Query Frame = 0 Query: 1 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSIL-----------------------------------VHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSIL VHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE Sbjct: 94 MLSKDQKEKALSENLYQRRGEGGSADVEEKEGTEEPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPDGSLPVRSLMRVNNPNRFSILHSPARNLGSGTLSQLTRFRRMLAPRVRLPFLVSGQVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 319
BLAST of EWM26904.1 vs. NCBI_GenBank
Match: gi|553181298|ref|XP_005853540.1| (hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526] >gi|422295520|gb|EKU22819.1| hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 92.0485 bits (227), Expect = 1.039e-18 Identity = 62/169 (36.69%), Postives = 103/169 (60.95%), Query Frame = 0 Query: 27 VEEKEGTE-EPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191 V +G + +P I L+SS+HS V ++V + ++L+ MPKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP P G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+ Sbjct: 74 VSSHDGEDLKPPGTPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSID 242
BLAST of EWM26904.1 vs. NCBI_GenBank
Match: gi|585109030|gb|EWM26900.1| (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 91.6633 bits (226), Expect = 1.347e-18 Identity = 62/169 (36.69%), Postives = 103/169 (60.95%), Query Frame = 0 Query: 27 VEEKEGTE-EPQSVSPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191 V +G + +P I L+SS+HS V ++V + ++L+ MPKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP P G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+ Sbjct: 74 VSSHDGEDLKPPGTPSQIHLMSSMHSQVVNVVHHVQDYLHHMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSID 242
BLAST of EWM26904.1 vs. NCBI_GenBank
Match: gi|585109031|gb|EWM26901.1| (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 78.9518 bits (193), Expect = 1.789e-14 Identity = 49/130 (37.69%), Postives = 80/130 (61.54%), Query Frame = 0 Query: 65 YQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191 + PKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP P G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+ Sbjct: 21 FHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSID 150
BLAST of EWM26904.1 vs. NCBI_GenBank
Match: gi|585112577|gb|EWM29974.1| (hypothetical protein Naga_100383g2 [Nannochloropsis gaditana]) HSP 1 Score: 71.2478 bits (173), Expect = 3.690e-11 Identity = 49/154 (31.82%), Postives = 85/154 (55.19%), Query Frame = 0 Query: 40 SPSISLLSSLHSSVRSIVGQIGNHLYQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLP--LPPDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPG----SLLGVSTIPEHLLHAREGAHTTESVFVVRDL 187 +PS S S+HS ++ I + L+ +P+WKYR + +S+++ +I LLL VS+VYGFG+ H+ V + P + +G+ P+R+ + ++NPN F I +++ V S+ R+ G + L + +P LHAR + FV+ L Sbjct: 108 APSFSTTQSVHS----VMSDIRSRLHHLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGTTPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEV-VLSYMNRTDGGQQYTPLASAPLPRIQLHARHKDCMLTTDFVLAHL 256 The following BLAST results are available for this feature:
BLAST of EWM26904.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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