EWM26901.1, cds3766 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26901.1 vs. NCBI_GenBank
Match: gi|585109031|gb|EWM26901.1| (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 450.669 bits (1158), Expect = 3.241e-160 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0
Query: 1 MPPVTPIFSRALTFFLVCSSFHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEVSKECRKGLGLEAGLGPRLEMHAWVGKRGRKASDACSCVFRLFLVHRAKIVCSTRQVLVKSP 223
MPPVTPIFSRALTFFLVCSSFHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEVSKECRKGLGLEAGLGPRLEMHAWVGKRGRKASDACSCVFRLFLVHRAKIVCSTRQVLVKSP
Sbjct: 1 MPPVTPIFSRALTFFLVCSSFHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEVSKECRKGLGLEAGLGPRLEMHAWVGKRGRKASDACSCVFRLFLVHRAKIVCSTRQVLVKSP 223
BLAST of EWM26901.1 vs. NCBI_GenBank
Match: gi|585109030|gb|EWM26900.1| (hypothetical protein Naga_100103g12 [Nannochloropsis gaditana]) HSP 1 Score: 409.068 bits (1050), Expect = 2.617e-142 Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0
Query: 22 HRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEVSKECRKGLGLEAGLGPRLEMHAWVGKRGRKASDACSCVFRLFLVHRAKIVCSTRQVLVKSP 223
H PKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEVSKECRKGLGLEAGLGPRLEMHAWVGKRGRKASDACSCVFRLFLVHRAKIVCSTRQVLVKSP
Sbjct: 114 HMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEVSKECRKGLGLEAGLGPRLEMHAWVGKRGRKASDACSCVFRLFLVHRAKIVCSTRQVLVKSP 315
BLAST of EWM26901.1 vs. NCBI_GenBank
Match: gi|553181298|ref|XP_005853540.1| (hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526] >gi|422295520|gb|EKU22819.1| hypothetical protein NGA_0432801 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 281.567 bits (719), Expect = 3.666e-92 Identity = 146/161 (90.68%), Postives = 146/161 (90.68%), Query Frame = 0
Query: 22 HRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE----------VSKECRKGLGL 172
H PKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE SK KGLGL
Sbjct: 114 HMPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLEGQNCLLYTTSTSKITVKGLGL 274
BLAST of EWM26901.1 vs. NCBI_GenBank
Match: gi|585109033|gb|EWM26903.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 88.5817 bits (218), Expect = 5.058e-17 Identity = 55/141 (39.01%), Postives = 86/141 (60.99%), Query Frame = 0
Query: 21 FHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALP-PPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVL 160
+ PKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP PP G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+GG AVL
Sbjct: 189 YQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPD----GSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIEGGPDLAEAVL 325
BLAST of EWM26901.1 vs. NCBI_GenBank
Match: gi|585109034|gb|EWM26904.1| (hypothetical protein Naga_100103g11 [Nannochloropsis gaditana]) HSP 1 Score: 81.2629 bits (199), Expect = 2.986e-15 Identity = 49/130 (37.69%), Postives = 80/130 (61.54%), Query Frame = 0
Query: 21 FHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRIYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSID 150
+ PKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP P G +P+ S + +NPN F + I +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+
Sbjct: 65 YQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLP---PDGSLPVRSLMRVNNPNRFSILVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 191
BLAST of EWM26901.1 vs. NCBI_GenBank
Match: gi|553181303|ref|XP_005853541.1| (hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526] >gi|422295521|gb|EKU22820.1| hypothetical protein NGA_0432901 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 67.781 bits (164), Expect = 1.206e-9 Identity = 53/166 (31.93%), Postives = 84/166 (50.60%), Query Frame = 0
Query: 21 FHRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALP-PPHVDSAGHIPIVSTILFSNPNSFF------------TTSSLSPIR-----------------------IYALPSRSPESLLALTAPRTIRLAGHEEGYSFDVNFTLKDVGSID 150
+ PKW+YRL++ ++++L +S +L+L VSV+YGF M+LPHI V V + LP PP G +P+ S + +NPN F T S L+ R +Y+ P+RSP SLL ++ L E ++ + F ++D+GSI+
Sbjct: 158 YQMPKWKYRLMVSSIVVLLISFLLLLFVSVVYGFGMSLPHIEVVAVDVVLPLPPD----GSLPVRSLMRVNNPNRFSILHSPARNLGSGTLSQLTRFRRMLAPRVRLPFLVSGQVHPTDISVYSHPTRSPGSLLGVSTIPEHLLHAREGAHTTESVFVVRDLGSIE 319
BLAST of EWM26901.1 vs. NCBI_GenBank
Match: gi|585112577|gb|EWM29974.1| (hypothetical protein Naga_100383g2 [Nannochloropsis gaditana]) HSP 1 Score: 58.9214 bits (141), Expect = 8.902e-7 Identity = 46/144 (31.94%), Postives = 75/144 (52.08%), Query Frame = 0
Query: 22 HRPKWQYRLLLCTVIILFVSLVLVLTVSVLYGFNMALPHIRVTNVRLALPPPHVDSAGHIPIVSTILFSNPNSFFTTSSLSPIRI-YALPSRSPESLLALTA---PRTIRLAGHEEGYSFDVNFTLKDVGSIDGGNATVAAVLE 161
H P+W+YR L ++++ + L L+L VS++YGF + H+ VT L P VD+ G+ P+ +TI NPNSF T+S S + + Y + + L + PR I+L + +F L + + G A + AVL+
Sbjct: 130 HLPRWKYRFLCASLLLAVILLGLLLCVSIVYGFGLKYVHLSVTGT-TPLAPNLVDAEGNAPMRATISLDNPNSFPITASASEVVLSYMNRTDGGQQYTPLASAPLPR-IQLHARHKDCMLTTDFVLAHLPTKPEGKAIMGAVLQ 271 The following BLAST results are available for this feature:
BLAST of EWM26901.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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