EWM26925.1, cds3753 (CDS) Nannochloropsis gaditana

Overview
NameEWM26925.1
Unique Namecds3753
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1162724..1163953 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26925.1
Productprotein ariadne
Orig transcript idgnl|cribi|Naga_100284g3.708.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1162724..1163953 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016740transferase activity
GO:0004842ubiquitin-protein transferase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0016567protein ubiquitination
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR031127E3_UB_ligase_RBR
IPR002867Znf_C6HC
Homology
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|585109057|gb|EWM26925.1| (protein ariadne [Nannochloropsis gaditana])

HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0
Identity = 409/409 (100.00%), Postives = 409/409 (100.00%), Query Frame = 0
Query:    1 MRERLAAFSCKNFNAQPPEDTPTRIDCKFLSPRFFLQKILPPEPSTYYFNNVFKGKINKRSHGPSTNASTTLSGLSTMFHRLRRKNDDFNTKKSLSTSYLTSHHYCPICLEWLPPKHPLRFLSLLLKREGLNFAAATACCPSGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLKANACTCVGMRFAMWHEENQQFPPLHILFNGMIIMVATAWVLVILSVCLLTSFFYGTDKMVRRILFYRRLLYETCSFVWNDVTELVTRPLQK 409
            MRERLAAFSCKNFNAQPPEDTPTRIDCKFLSPRFFLQKILPPEPSTYYFNNVFKGKINKRSHGPSTNASTTLSGLSTMFHRLRRKNDDFNTKKSLSTSYLTSHHYCPICLEWLPPKHPLRFLSLLLKREGLNFAAATACCPSGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLKANACTCVGMRFAMWHEENQQFPPLHILFNGMIIMVATAWVLVILSVCLLTSFFYGTDKMVRRILFYRRLLYETCSFVWNDVTELVTRPLQK
Sbjct:    1 MRERLAAFSCKNFNAQPPEDTPTRIDCKFLSPRFFLQKILPPEPSTYYFNNVFKGKINKRSHGPSTNASTTLSGLSTMFHRLRRKNDDFNTKKSLSTSYLTSHHYCPICLEWLPPKHPLRFLSLLLKREGLNFAAATACCPSGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLKANACTCVGMRFAMWHEENQQFPPLHILFNGMIIMVATAWVLVILSVCLLTSFFYGTDKMVRRILFYRRLLYETCSFVWNDVTELVTRPLQK 409          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|673023838|ref|XP_008865880.1| (hypothetical protein H310_03696 [Aphanomyces invadans] >gi|574479108|gb|ETW06103.1| hypothetical protein H310_03696 [Aphanomyces invadans])

HSP 1 Score: 113.62 bits (283), Expect = 6.034e-24
Identity = 60/177 (33.90%), Postives = 89/177 (50.28%), Query Frame = 0
Query:  143 GHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQ-DTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRK---GDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSC 315
             HE+C  C+  YV   +++ +   + L CP+  C TP   +++LH + T   + K+  FV   +  + P  RWCP+ NCN +         D +    +  C  C    C  CG   H  + C Q+ +  Y  W+ R+    + V+PCPGCG  I K  GCN MTCT+CR +WCW C
Sbjct:   60 SHEFCFDCIKTYVAKKVDDRQVEADQLTCPIVECQTPLTVESILH-VTTEATFLKYMRFVQLNQFERMPHGRWCPRPNCNAMI--------DCDPTLPTFQCTTCHTKGCFKCGSVSHPFRTCHQAMDAHYRAWEARQRATSNYVQPCPGCGVRIWKNDGCNHMTCTKCRHEWCWIC 227          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|1134878888|gb|OMJ76649.1| (hypothetical protein SteCoe_23955 [Stentor coeruleus])

HSP 1 Score: 107.842 bits (268), Expect = 5.246e-22
Identity = 74/264 (28.03%), Postives = 119/264 (45.08%), Query Frame = 0
Query:  122 LSLLLKREGLNFAAATACCPSGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLKANACTCVGMRFAMWHEE-------NQQFPPLHILFNGMIIMVATAWVLVILSVC----LLTSFFYGT 374
            +S ++ +  LN   + +       +C  CL  Y+ + I E +    ++ CP   C     + L+ SL +   +EK+  F N  ++ ++P LRWCP+ +C G    +    Q         TC  C   +C  CG   H  +KC    ++    W K  G  +K CP C   +EK +GC+ MTC +CR +WCW C          G R++  H E        ++ PPLHI+   ++  +    + VI+ V     +LTS   GT
Sbjct:   72 VSCMICQSNLNQVNSVSVPECMDAFCKNCLLEYIKIRIEESQVL--SMPCPNHDCRAEISEPLIKSLISPVLFEKYLTFRNNEELSKDPFLRWCPKPDCKGYDIGSLKKNQ--------LTCNTCGFNYCYYCGEAWHPKQKCKGIVDKDMDKWAKNHG--LKYCPNCRRKVEKNLGCDHMTCVKCRYEWCWLC----------GERYSSGHYEICEVKKLMKKDPPLHIVLKLLLAPMLLPLMFVIICVVGVNKMLTSPSVGT 313          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|1134876801|gb|OMJ74678.1| (hypothetical protein SteCoe_26357 [Stentor coeruleus])

HSP 1 Score: 106.301 bits (264), Expect = 9.579e-22
Identity = 55/178 (30.90%), Postives = 91/178 (51.12%), Query Frame = 0
Query:  141 PSGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLK 318
            P   ++C  CL  Y+ + I E       + CP  +C     D ++ SL T + + K+ +F  + ++ + P ++ CP+ NCNG A      +QDH  I     C  CS  +C  C    H  ++C +  ++ + +W K+  + +K CP C + +EK  GC+ MTC  C+ +WCW CG K
Sbjct:   62 PCNDQFCSQCLCEYIKIHIQESNVL--IIPCPNHNCPKIITDQIVQSLITEDLYSKYLHFKRKQELLKIPNVKLCPKENCNGFAVRN---KQDHVVI-----CKSCSFEYCFYCSEPSHSLRECKKQEDKDFDLWAKK--NKMKYCPSCRNWVEKANGCDHMTCINCKYEWCWLCGEK 227          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|678315508|emb|CDW86799.1| (ibr domain containing protein [Stylonychia lemnae])

HSP 1 Score: 107.457 bits (267), Expect = 1.340e-21
Identity = 79/305 (25.90%), Postives = 130/305 (42.62%), Query Frame = 0
Query:   99 YLTSHHYCPICLEWLPPKHPLRFLSLLLKREGLNFAAATAC-CPSGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLK--------ANACTCVGMRFAMWHEENQQFPPLHILFNGMIIMVATAWVLVILSVCLLTSFFYG-TDKMVRRILFYRRLLYETCS 393
            +L S  + P  +E +    P+ F  ++ +   +N+           H++C+ CL  Y+  ++  G+     ++CP   C   F    +    + E + K+  F     V  NP L+WCP+ NCN      H  Q++ +   V   C +     C +CG + H   KC ++ ++ +  W    G+ +  CP C   +EK  GCN MTC +C   WCW CG K         N   C G ++  +H          IL N +I       +L+   V L+  +F    D  + RIL   + +  TCS
Sbjct:  229 HLPSQEFKPAPIEPVQRAQPIDFGGVMCEICYMNYMETDMYGIICNHKFCLNCLYDYLEFNVTNGQVM--KVKCPQNTCKEEFTREDIRKFGSQEIYMKYLKFKENIDVNLNPNLKWCPKPNCN------HYIQKNKKSRKVKCECGM---EICFDCGIEWHGKIKCKEAMDKEFFGWAANNGN-ISNCPKCKVRLEKIAGCNHMTCRQCGYSWCWLCGKKYTSNHYSIINVFGCPGQQYFTYHR------IWVILLNILIFAGIPLIILLAPPVYLIGKYFDNYDDDFISRILCCVKCIDRTCS 515          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|1134888112|gb|OMJ85488.1| (hypothetical protein SteCoe_13174 [Stentor coeruleus])

HSP 1 Score: 105.916 bits (263), Expect = 1.705e-21
Identity = 56/174 (32.18%), Postives = 79/174 (45.40%), Query Frame = 0
Query:  142 SGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSC 315
              HE+C  C T +V   I + + +H  + CP   C   F +  +  + + E + K+  F   A +  +P ++WC Q NC G  R      +          CP C    C  CG   H  K C+Q  ++ Y +W K  G  ++ CP C H IEK  GCN MTC  C   WCW C
Sbjct:  137 GNHEFCKNCFTQHVESLIKDSKVNH--ILCPGKDCQAEFGEDDIKMIVSEENFIKYVKFKERAMLMADPSVKWCTQPNCEGYVRGNDGDTK--------LACPKCGFDLCFQCGKAWHPKKTCEQIVDEDYELWAK--GKEIQLCPKCKHKIEKFDGCNHMTCAACNYNWCWLC 298          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|1134878543|gb|OMJ76322.1| (hypothetical protein SteCoe_24348 [Stentor coeruleus])

HSP 1 Score: 104.76 bits (260), Expect = 4.373e-21
Identity = 61/207 (29.47%), Postives = 98/207 (47.34%), Query Frame = 0
Query:  142 SGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLKANA-----CTCVGMRFAM-WHEENQQFPPL 342
            + H YC  C+  Y+ V I+E R     + CP   C+  F DTL+ S  +   + K++ F+   ++ ++P  ++CPQ +C G  + +               C +C    C  CG   H    CD+   + Y++W K K   +K CP C + IEK  GC+ MTC  C+ ++CW C    +A     C  VGM+  + +H     F P+
Sbjct:  144 NDHLYCRDCIKNYLEVLISESRIL--KILCPGKTCNAYFTDTLIQSFISPIYFLKYEKFLQRQRLLKDPFTKFCPQPDCEGYIQGSETDNH--------KFCNICFFEMCFICGKGWHEEYTCDEVQEKEYSIWAKDKN--IKGCPVCKYRIEKNEGCDHMTCIICKHEFCWICLKPRSAVVQCDCVIVGMQGDIAFHNRIYHFNPI 338          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|678316760|emb|CDW86144.1| (ibr domain containing protein [Stylonychia lemnae])

HSP 1 Score: 105.145 bits (261), Expect = 4.463e-21
Identity = 68/237 (28.69%), Postives = 105/237 (44.30%), Query Frame = 0
Query:   82 LRRKNDDFNTKKSLSTSYLTSHHYCPICLEWLPPKHPLRFLSLLLKREGLNFAAATACCPSGHEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEA--WEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCG 316
            +++K+ +   K      YL S   CPIC E   PK   ++L L               C   H++C  C   Y+  +IN+G+     ++C    C    ++ ++  L  +E    EK+K FV   K+ ++PL+RWC +  C    +      +          C  C +  C  CG + H S KCD   ++ +  W     + V+ CP C   IEK  GCN MTC  CR ++CW CG
Sbjct:  121 MKQKSHNLAEKLKSEIHYLDSDQICPICCE---PKT--QYLELD--------------CKDQHKFCTDCTIQYLKTNINDGKVL--DIKCMDASCQIYIKEQVILDLLQSEQELLEKYKRFVFRRKIEKDPLIRWCSRPTCEKYVKAKSIKDK-------KLKCE-CGQLVCFQCGNEYHGSSKCDSVIDKQFFDWVNE--NNVRYCPSCKIRIEKNDGCNHMTCIYCRFEFCWICG 326          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|403359855|gb|EJY79585.1| (IBR domain containing protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 105.916 bits (263), Expect = 7.351e-21
Identity = 58/198 (29.29%), Postives = 84/198 (42.42%), Query Frame = 0
Query:  144 HEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLK--------ANACTCVGMRFAMWH 333
            H YC  CL  Y+  +I+ G+     ++C    C   F    +    + E ++K+  F     V  NP L+WCP+ NCN             +G     TC  C    C +CG + H   KC +  ++ +  W    G+ +  CP C   +EK  GCN MTC +C   WCW CG K         N   C G ++   H
Sbjct:  283 HRYCKNCLYDYLEYNISNGQV--RVIKCADAQCKEEFTKEDVEKFGSKEIYDKYLKFKENIDVNLNPNLKWCPKPNCNNYIS---------KGKKRKVTCK-CGLEICFDCGIEWHGKIKCKEVMDKEFFSWAANNGN-ISNCPKCKVRLEKISGCNHMTCRQCGYSWCWLCGKKYTDFHYNPINVFGCPGQQYFTQH 467          
BLAST of EWM26925.1 vs. NCBI_GenBank
Match: gi|403333348|gb|EJY65764.1| (IBR domain containing protein (macronuclear) [Oxytricha trifallax])

HSP 1 Score: 105.531 bits (262), Expect = 9.266e-21
Identity = 54/175 (30.86%), Postives = 78/175 (44.57%), Query Frame = 0
Query:  144 HEYCIPCLTIYVNVSINEGRTSHETLRCPLTHCSTPFQDTLLHSLATAEAWEKHKYFVNEAKVCQNPLLRWCPQSNCNGVARLTHAPQQDHEGIYVSATCPVCSEGFCGNCGGDPHRSKKCDQSGNQAYAMWKKRKGDAVKPCPGCGHHIEKGIGCNAMTCTRCRTKWCWSCGLK 318
            H YC  CL  Y+  +I+ G+     ++C    C   F    +    + E ++K+  F     V  NP L+WCP+ NCN             +G     TC  C    C +CG + H   KC +  ++ +  W    G+ +  CP C   +EK  GCN MTC +C   WCW CG K
Sbjct:  292 HRYCKNCLYDYLEYNISNGQV--RVIKCADAQCKEEFTKEDVEKFGSKEIYDKYLKFKENIDVNLNPNLKWCPKPNCNNYIS---------KGKKRKVTCK-CGLEICFDCGIEWHGKIKCKEVMDKEFFSWAANNGN-ISNCPKCKVRLEKISGCNHMTCRQCGYSWCWLCGKK 453          
The following BLAST results are available for this feature:
BLAST of EWM26925.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109057|gb|EWM26925.1|0.000e+0100.00protein ariadne [Nannochloropsis gaditana][more]
gi|673023838|ref|XP_008865880.1|6.034e-2433.90hypothetical protein H310_03696 [Aphanomyces invad... [more]
gi|1134878888|gb|OMJ76649.1|5.246e-2228.03hypothetical protein SteCoe_23955 [Stentor coerule... [more]
gi|1134876801|gb|OMJ74678.1|9.579e-2230.90hypothetical protein SteCoe_26357 [Stentor coerule... [more]
gi|678315508|emb|CDW86799.1|1.340e-2125.90ibr domain containing protein [Stylonychia lemnae][more]
gi|1134888112|gb|OMJ85488.1|1.705e-2132.18hypothetical protein SteCoe_13174 [Stentor coerule... [more]
gi|1134878543|gb|OMJ76322.1|4.373e-2129.47hypothetical protein SteCoe_24348 [Stentor coerule... [more]
gi|678316760|emb|CDW86144.1|4.463e-2128.69ibr domain containing protein [Stylonychia lemnae][more]
gi|403359855|gb|EJY79585.1|7.351e-2129.29IBR domain containing protein (macronuclear) [Oxyt... [more]
gi|403333348|gb|EJY65764.1|9.266e-2130.86IBR domain containing protein (macronuclear) [Oxyt... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3762rna3762Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications