EWM30245.1, cds375 (CDS) Nannochloropsis gaditana

Overview
NameEWM30245.1
Unique Namecds375
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:917019..918554 +
Alignment locationCM002455.1:918634..918681 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30245.1
Productnadph dependent mannose 6-phosphate reductase
Orig transcript idgnl|cribi|Naga_100003g115.1762.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:917019..918554 +
CM002455.1supercontigCM002455.1:918634..918681 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR001395Aldo/ket_red
IPR023210NADP_OxRdtase_dom
Homology
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|585112904|gb|EWM30245.1| (nadph dependent mannose 6-phosphate reductase [Nannochloropsis gaditana])

HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0
Identity = 527/527 (100.00%), Postives = 527/527 (100.00%), Query Frame = 0
Query:    1 MCLRMRALIHIFGCAPSYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDILLHGKLWKCC 527
            MCLRMRALIHIFGCAPSYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDILLHGKLWKCC
Sbjct:    1 MCLRMRALIHIFGCAPSYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDILLHGKLWKCC 527          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|553195920|ref|XP_005856231.1| (aldo keto reductase family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292826|gb|EKU20128.1| aldo keto reductase family protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1023.46 bits (2645), Expect = 0.000e+0
Identity = 496/501 (99.00%), Postives = 498/501 (99.40%), Query Frame = 0
Query:   17 SYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDI 517
            SYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSE +  +
Sbjct:    1 SYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSEVSTHV 501          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|831769812|ref|XP_012752817.1| (hypothetical protein SAMD00019534_076660, partial [Acytostelium subglobosum LB1] >gi|735853449|dbj|GAM24491.1| hypothetical protein SAMD00019534_076660, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 68.5514 bits (166), Expect = 3.978e-9
Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = 0
Query:  418 SRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSL 499
            S +LSS   +P VG+GT  ++ ++ E    + +AV+ A++AGCR +DC+  YG + E+G AL+++F     +RE LFI S L
Sbjct:    3 SYKLSSGFSIPTVGFGT--WQSKKNE----VAEAVKIAIKAGCRHIDCAAIYGNEAEIGGALKELFDEGVVKREDLFITSKL 78          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|831774494|ref|XP_012754229.1| (hypothetical protein SAMD00019534_061770 [Acytostelium subglobosum LB1] >gi|735854861|dbj|GAM23002.1| hypothetical protein SAMD00019534_061770 [Acytostelium subglobosum LB1])

HSP 1 Score: 66.6254 bits (161), Expect = 2.181e-8
Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 0
Query:  407 AISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSL 499
            AI++ +  P++  +L S   +PLVG+GT  ++        T+ +AV+ A+R GCR +DC+  Y  + EVG AL++MF     +RE LFI S L
Sbjct:    3 AIAKAIIEPSV--KLISGHKLPLVGFGT--WKSEPN----TVGEAVKAAIRGGCRHIDCAAAYQNEKEVGLALKEMFTTGVVKREELFITSKL 87          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|674240141|gb|KFK32906.1| (nadp-dependent d-sorbitol-6-phosphate dehydrogenase [Arabis alpina])

HSP 1 Score: 66.6254 bits (161), Expect = 2.326e-8
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0
Query:  421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
            L+S   MP+VG G  V+R  E+EG   + D +  A+  G R LDC+ DY  + EVGEAL Q+FK    +RE LFI + L      +HG V E  KD L
Sbjct:    5 LNSGFKMPIVGLG--VWR-MEKEG---IRDLIINAINLGYRHLDCAADYKNEAEVGEALAQVFKTALVKREDLFITTKLW---NSDHGHVIEACKDSL 93          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|1124040211|ref|XP_019578198.1| (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Rhinolophus sinicus])

HSP 1 Score: 66.2402 bits (160), Expect = 2.792e-8
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0
Query:  421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
            L+S   MP+VG G  V+R  E+EG   + D +  A++ G R LDC+ DY  + EVGEAL ++FK    +RE LFI + L      +HG V E  KD L
Sbjct:    5 LNSGYKMPIVGLG--VWR-MEKEG---IRDLIINAIKIGYRHLDCAADYKNEAEVGEALTEVFKTGLVKREDLFITTKLW---NSDHGHVIEACKDSL 93          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|567190152|ref|XP_006404566.1| (hypothetical protein EUTSA_v10000256mg [Eutrema salsugineum] >gi|557105694|gb|ESQ46019.1| hypothetical protein EUTSA_v10000256mg [Eutrema salsugineum])

HSP 1 Score: 66.2402 bits (160), Expect = 2.896e-8
Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0
Query:  421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
            L+S   MP+VG G  V+R  E+EG   + D +  AL+ G R LDC+ DY  + EVGEAL + FK    +RE LFI + L      +HG V E  KD L
Sbjct:    5 LNSGYKMPIVGLG--VWR-MEKEG---IRDLIINALKIGYRHLDCAADYKNEAEVGEALAEAFKTGLVKREDLFITTKLW---NSDHGHVIEACKDSL 93          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|658038541|ref|XP_008354836.1| (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Malus domestica])

HSP 1 Score: 62.7734 bits (151), Expect = 3.160e-8
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0
Query:  421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
            L+S   MP+VG G     G+E      + D V  AL  G R  DC+ DY  +PEVGEAL + F     +RE +FI + L      +HG V E  KD L
Sbjct:    5 LNSGFNMPVVGLGVWRMEGKE------IRDLVLNALNLGYRHFDCAADYKNEPEVGEALAEAFSTGLVRREDIFITTKLW---NSDHGHVVEACKDSL 93          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|565474016|ref|XP_006294649.1| (hypothetical protein CARUB_v10023686mg [Capsella rubella] >gi|482563357|gb|EOA27547.1| hypothetical protein CARUB_v10023686mg [Capsella rubella])

HSP 1 Score: 65.0846 bits (157), Expect = 6.465e-8
Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 0
Query:  421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
            L+S   MP+VG G  V+R  E+EG   + D +  A++ G R LDC+ DY  + EVGEAL + FK    +RE LFI + L      +HG V E  KD L
Sbjct:    5 LNSGFKMPIVGLG--VWR-MEKEG---IRDLIINAIKIGYRHLDCAADYRNEAEVGEALTEAFKTGLVKREELFITTKLW---NSDHGHVIEACKDSL 93          
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|727598269|ref|XP_010472105.1| (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Camelina sativa])

HSP 1 Score: 65.0846 bits (157), Expect = 7.412e-8
Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0
Query:  421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
            L+S   MP+VG G  V+R  E+EG   + D + +A++ G R LDC+ DY  + EVGEAL + FK    +RE LFI + L      +HG V E  KD L
Sbjct:    5 LNSGFKMPIVGLG--VWR-MEKEG---IRDLIISAIKIGYRHLDCAADYRNETEVGEALTEAFKTGLVKREDLFITTKLW---NSDHGHVIEACKDSL 93          
The following BLAST results are available for this feature:
BLAST of EWM30245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112904|gb|EWM30245.1|0.000e+0100.00nadph dependent mannose 6-phosphate reductase [Nan... [more]
gi|553195920|ref|XP_005856231.1|0.000e+099.00aldo keto reductase family protein, partial [Nanno... [more]
gi|831769812|ref|XP_012752817.1|3.978e-940.24hypothetical protein SAMD00019534_076660, partial ... [more]
gi|831774494|ref|XP_012754229.1|2.181e-838.71hypothetical protein SAMD00019534_061770 [Acytoste... [more]
gi|674240141|gb|KFK32906.1|2.326e-843.88nadp-dependent d-sorbitol-6-phosphate dehydrogenas... [more]
gi|1124040211|ref|XP_019578198.1|2.792e-842.86PREDICTED: NADP-dependent D-sorbitol-6-phosphate d... [more]
gi|567190152|ref|XP_006404566.1|2.896e-843.88hypothetical protein EUTSA_v10000256mg [Eutrema sa... [more]
gi|658038541|ref|XP_008354836.1|3.160e-839.80PREDICTED: NADP-dependent D-sorbitol-6-phosphate d... [more]
gi|565474016|ref|XP_006294649.1|6.465e-842.86hypothetical protein CARUB_v10023686mg [Capsella r... [more]
gi|727598269|ref|XP_010472105.1|7.412e-842.86PREDICTED: NADP-dependent D-sorbitol-6-phosphate d... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna375rna375Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications