EWM30245.1, cds375 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|585112904|gb|EWM30245.1| (nadph dependent mannose 6-phosphate reductase [Nannochloropsis gaditana]) HSP 1 Score: 1092.8 bits (2825), Expect = 0.000e+0 Identity = 527/527 (100.00%), Postives = 527/527 (100.00%), Query Frame = 0
Query: 1 MCLRMRALIHIFGCAPSYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDILLHGKLWKCC 527
MCLRMRALIHIFGCAPSYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDILLHGKLWKCC
Sbjct: 1 MCLRMRALIHIFGCAPSYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDILLHGKLWKCC 527
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|553195920|ref|XP_005856231.1| (aldo keto reductase family protein, partial [Nannochloropsis gaditana CCMP526] >gi|422292826|gb|EKU20128.1| aldo keto reductase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1023.46 bits (2645), Expect = 0.000e+0 Identity = 496/501 (99.00%), Postives = 498/501 (99.40%), Query Frame = 0
Query: 17 SYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDI 517
SYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSE + +
Sbjct: 1 SYPFRYKLPQEVRRVRDSLHVPPDMAKWRVFFLLLLGVTSTRSFRFLPVRSPSSPALLPSCWAIALSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAPVGCAISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSEVSTHV 501
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|831769812|ref|XP_012752817.1| (hypothetical protein SAMD00019534_076660, partial [Acytostelium subglobosum LB1] >gi|735853449|dbj|GAM24491.1| hypothetical protein SAMD00019534_076660, partial [Acytostelium subglobosum LB1]) HSP 1 Score: 68.5514 bits (166), Expect = 3.978e-9 Identity = 33/82 (40.24%), Postives = 53/82 (64.63%), Query Frame = 0
Query: 418 SRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSL 499
S +LSS +P VG+GT ++ ++ E + +AV+ A++AGCR +DC+ YG + E+G AL+++F +RE LFI S L
Sbjct: 3 SYKLSSGFSIPTVGFGT--WQSKKNE----VAEAVKIAIKAGCRHIDCAAIYGNEAEIGGALKELFDEGVVKREDLFITSKL 78
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|831774494|ref|XP_012754229.1| (hypothetical protein SAMD00019534_061770 [Acytostelium subglobosum LB1] >gi|735854861|dbj|GAM23002.1| hypothetical protein SAMD00019534_061770 [Acytostelium subglobosum LB1]) HSP 1 Score: 66.6254 bits (161), Expect = 2.181e-8 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 0
Query: 407 AISQKMFPPTLSRRLSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSL 499
AI++ + P++ +L S +PLVG+GT ++ T+ +AV+ A+R GCR +DC+ Y + EVG AL++MF +RE LFI S L
Sbjct: 3 AIAKAIIEPSV--KLISGHKLPLVGFGT--WKSEPN----TVGEAVKAAIRGGCRHIDCAAAYQNEKEVGLALKEMFTTGVVKREELFITSKL 87
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|674240141|gb|KFK32906.1| (nadp-dependent d-sorbitol-6-phosphate dehydrogenase [Arabis alpina]) HSP 1 Score: 66.6254 bits (161), Expect = 2.326e-8 Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0
Query: 421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
L+S MP+VG G V+R E+EG + D + A+ G R LDC+ DY + EVGEAL Q+FK +RE LFI + L +HG V E KD L
Sbjct: 5 LNSGFKMPIVGLG--VWR-MEKEG---IRDLIINAINLGYRHLDCAADYKNEAEVGEALAQVFKTALVKREDLFITTKLW---NSDHGHVIEACKDSL 93
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|1124040211|ref|XP_019578198.1| (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Rhinolophus sinicus]) HSP 1 Score: 66.2402 bits (160), Expect = 2.792e-8 Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0
Query: 421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
L+S MP+VG G V+R E+EG + D + A++ G R LDC+ DY + EVGEAL ++FK +RE LFI + L +HG V E KD L
Sbjct: 5 LNSGYKMPIVGLG--VWR-MEKEG---IRDLIINAIKIGYRHLDCAADYKNEAEVGEALTEVFKTGLVKREDLFITTKLW---NSDHGHVIEACKDSL 93
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|567190152|ref|XP_006404566.1| (hypothetical protein EUTSA_v10000256mg [Eutrema salsugineum] >gi|557105694|gb|ESQ46019.1| hypothetical protein EUTSA_v10000256mg [Eutrema salsugineum]) HSP 1 Score: 66.2402 bits (160), Expect = 2.896e-8 Identity = 43/98 (43.88%), Postives = 56/98 (57.14%), Query Frame = 0
Query: 421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
L+S MP+VG G V+R E+EG + D + AL+ G R LDC+ DY + EVGEAL + FK +RE LFI + L +HG V E KD L
Sbjct: 5 LNSGYKMPIVGLG--VWR-MEKEG---IRDLIINALKIGYRHLDCAADYKNEAEVGEALAEAFKTGLVKREDLFITTKLW---NSDHGHVIEACKDSL 93
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|658038541|ref|XP_008354836.1| (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like [Malus domestica]) HSP 1 Score: 62.7734 bits (151), Expect = 3.160e-8 Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0
Query: 421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
L+S MP+VG G G+E + D V AL G R DC+ DY +PEVGEAL + F +RE +FI + L +HG V E KD L
Sbjct: 5 LNSGFNMPVVGLGVWRMEGKE------IRDLVLNALNLGYRHFDCAADYKNEPEVGEALAEAFSTGLVRREDIFITTKLW---NSDHGHVVEACKDSL 93
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|565474016|ref|XP_006294649.1| (hypothetical protein CARUB_v10023686mg [Capsella rubella] >gi|482563357|gb|EOA27547.1| hypothetical protein CARUB_v10023686mg [Capsella rubella]) HSP 1 Score: 65.0846 bits (157), Expect = 6.465e-8 Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = 0
Query: 421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
L+S MP+VG G V+R E+EG + D + A++ G R LDC+ DY + EVGEAL + FK +RE LFI + L +HG V E KD L
Sbjct: 5 LNSGFKMPIVGLG--VWR-MEKEG---IRDLIINAIKIGYRHLDCAADYRNEAEVGEALTEAFKTGLVKREELFITTKLW---NSDHGHVIEACKDSL 93
BLAST of EWM30245.1 vs. NCBI_GenBank
Match: gi|727598269|ref|XP_010472105.1| (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Camelina sativa]) HSP 1 Score: 65.0846 bits (157), Expect = 7.412e-8 Identity = 42/98 (42.86%), Postives = 57/98 (58.16%), Query Frame = 0
Query: 421 LSSSCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAMNHGDVSETNKDIL 518
L+S MP+VG G V+R E+EG + D + +A++ G R LDC+ DY + EVGEAL + FK +RE LFI + L +HG V E KD L
Sbjct: 5 LNSGFKMPIVGLG--VWR-MEKEG---IRDLIISAIKIGYRHLDCAADYRNETEVGEALTEAFKTGLVKREDLFITTKLW---NSDHGHVIEACKDSL 93 The following BLAST results are available for this feature:
BLAST of EWM30245.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|