EWM26924.1, cds3749 (CDS) Nannochloropsis gaditana

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|585109054|gb|EWM26922.1| (RNA polymerase Rpc34 [Nannochloropsis gaditana] >gi|585109056|gb|EWM26924.1| RNA polymerase Rpc34 [Nannochloropsis gaditana])

HSP 1 Score: 565.844 bits (1457), Expect = 0.000e+0
Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0

Query:    1 METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVEKRECRMAGRTSDSLSANMRLIAGCEYDVLRLPACTTCAHCFFSLCTI 272
            METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVEKRECRMAGRTSDSLSANMRLIAGCEYDVLRLPACTTCAHCFFSLCTI
Sbjct:    1 METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVEKRECRMAGRTSDSLSANMRLIAGCEYDVLRLPACTTCAHCFFSLCTI 272          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|553191657|ref|XP_005855425.1| (DNA-directed RNA polymerase III subunit RPC6 [Nannochloropsis gaditana CCMP526] >gi|422293632|gb|EKU20932.1| DNA-directed RNA polymerase III subunit RPC6 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 466.077 bits (1198), Expect = 1.059e-164
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0

Query:    1 METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVE 225
            METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVE
Sbjct:    1 METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVE 225          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|585109055|gb|EWM26923.1| (RNA polymerase Rpc34 [Nannochloropsis gaditana])

HSP 1 Score: 451.44 bits (1160), Expect = 3.668e-159
Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 0

Query:    1 METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVK 218
            METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKV+
Sbjct:    1 METSRKETTGAGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVE 218          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|299473570|emb|CBN77965.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 189.504 bits (480), Expect = 2.588e-55
Identity = 89/193 (46.11%), Postives = 135/193 (69.95%), Query Frame = 0

Query:   33 SHAEGLRNEQLREHFTERYLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVE 225
            S  +G+ +E L E F E Y  LV +INS L +N ++  K E++ + Y+ V    A+K+  L  EQ+++YQV+EKAGNKGIW +DI++ T++ Q  + K LK+LE R LVK+  S++SK++KLY+LY+L PAKEITGGPWYT+ EFD+EF++ LS  +  ++K+Q  PP L  IA  ++ SG+SK+   ++ V+
Sbjct:   24 SSDDGVNSEVLSESFGEEYPLLVDVINSLLVDNRLQLSKGENDTMWYKLVQEEKAKKLMGLTPEQMMIYQVIEKAGNKGIWTRDIKTATNVNQNTMTKTLKSLEGRHLVKTAKSVTSKSKKLYMLYELTPAKEITGGPWYTDQEFDYEFVKHLSSYVLSYVKEQETPP-LKDIAAAIKVSGISKIDLSMEEVK 215          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|953495812|emb|CEG42708.1| (dna-directed rna polymerase iii subunit [Plasmopara halstedii])

HSP 1 Score: 168.703 bits (426), Expect = 2.974e-47
Identity = 92/196 (46.94%), Postives = 124/196 (63.27%), Query Frame = 0

Query:   26 EFLSLCLSHAEGLRNEQLREHFTER----YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKV 217
            +FL L  ++ E + + ++R++F       Y  L  +IN+ L E  I+  K + N L Y  VD   AE++R L  EQ LV Q +E+AGNKGIW +DI+S T++ Q  + K L+ LE+R LVKS  SISSK +KLY+L+DL P+ EITGGPWY E EFDHEFI+ LS  +Y  IK      +L  I D V  SG+SKV
Sbjct:   15 KFLGLLRNYRESVTDAEVRDYFQTEGGGGYDQLPEVINTLLTEGKIKIFK-KGNVLSYGIVDAEEAERVRGLTLEQRLVLQEIERAGNKGIWTRDIKSNTNIPQQLVTKTLRLLETRHLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHEFIDTLSTFVYEVIKASGM-STLHSITDKVHASGISKV 208          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|695391128|ref|XP_009519929.1| (hypothetical protein PHYSODRAFT_554736 [Phytophthora sojae] >gi|348684826|gb|EGZ24641.1| hypothetical protein PHYSODRAFT_554736 [Phytophthora sojae])

HSP 1 Score: 168.318 bits (425), Expect = 4.013e-47
Identity = 102/252 (40.48%), Postives = 146/252 (57.94%), Query Frame = 0

Query:   11 AGGGQHKDESGNLREEFLSLCLSHAEGLRNEQLREHFTER------YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKV---KSEIKNVEKRECRMAGRTSDSLSANMRLIAGCEYDV 253
            A     K  + ++  +FL L  ++ E + + ++R++F         Y  L  +IN+ L E  I+  K + N L Y  VD   AE++R L  EQ LV Q +E+AGNKGIW +DI+S T++ Q  + K L+ LE+R+LVKS  SISSK +KLY+L+DL P+ EITGGPWY E EFDH FI+ LS  +Y  IK      +L  I D V  SG+SKV     EI+++  +     GR  +  S  +RL  G  ++V
Sbjct:    2 AAASTPKGGAPSVMTKFLGLLRNYREPVTDAEVRDYFKSEGGGGGGYEQLPDVINALLGEGKIKIFK-KGNVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSI-IQTLMYDGRVEEVRS--VRLTPGASHEV 248          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|676382223|ref|XP_009034390.1| (hypothetical protein AURANDRAFT_77764 [Aureococcus anophagefferens] >gi|676398019|ref|XP_009042287.1| hypothetical protein AURANDRAFT_34609 [Aureococcus anophagefferens] >gi|323447055|gb|EGB03019.1| hypothetical protein AURANDRAFT_34609 [Aureococcus anophagefferens] >gi|323454934|gb|EGB10803.1| hypothetical protein AURANDRAFT_77764 [Aureococcus anophagefferens])

HSP 1 Score: 167.548 bits (423), Expect = 8.334e-47
Identity = 90/209 (43.06%), Postives = 133/209 (63.64%), Query Frame = 0

Query:   22 NLREEFLSLCLSHAEG---LRNEQLREHFT-ERYLHLVPIINSCLAENLIRCMKTES-NELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVKSEIKNVE 225
            +++E+FL L L  A+G   + NE L+  F  E Y  L+P+IN  LAEN +  +K E   +L Y+  D   AEK+  L  EQLLV QVVE+A N G+W +DI++ TS+QQ  L K LK LESR+LVK+  S+  KT+KLY+ YDL P +E++GGPWYT+ EFDHEF+  + + +  ++ Q  +  +L  I   +  SG++ V   + +V+
Sbjct:    2 DVKEKFLEL-LGAAQGDAGVSNETLQRKFPGESYAALLPVINELLAENRLELLKEEGKQDLTYRLRDKAQAEKLSELTNEQLLVLQVVERAENAGVWLRDIKNATSMQQQTLNKALKVLESRKLVKTVKSVQQKTKKLYMAYDLVPTREVSGGPWYTDQEFDHEFVGAIKKIVVKYV-QSVQTSTLDEIHGALERSGIATVPLSVADVK 208          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|301121919|ref|XP_002908686.1| (DNA-directed RNA polymerase III subunit RPC6, putative [Phytophthora infestans T30-4] >gi|262099448|gb|EEY57500.1| DNA-directed RNA polymerase III subunit RPC6, putative [Phytophthora infestans T30-4])

HSP 1 Score: 166.392 bits (420), Expect = 1.805e-46
Identity = 101/244 (41.39%), Postives = 145/244 (59.43%), Query Frame = 0

Query:   17 KDESGNLREEFLSLCLSHAEGLRNEQLREHFTER----YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVK---SEIKNVEKRECRMAGRTSDSLSANMRLIAGCEYDV 253
            K  + ++  +FL L  ++ E + + ++RE+F       Y  L  +IN+ L E  I+  K + + L Y  VD   AE++R L  EQ LV Q +E+AGNKGIW +DI+S T++ Q  + K L+ LE+R+LVKS  SISSK +KLY+L+DL P+ EITGGPWY E EFDH FI+ LS  +Y  IK      +L  I D V  SG+SKV     EI+++  +     GR  +  S  +RL  G  ++V
Sbjct:    6 KSGAPSVMTKFLGLLKNYREPVTDAEVREYFQAGGGGGYDQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSI-IQTLMYDGRVEEVRS--VRLTPGASHEV 244          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|1214710266|gb|OWZ21373.1| (DNA-directed RNA polymerase III subunit RPC6 [Phytophthora megakarya])

HSP 1 Score: 166.007 bits (419), Expect = 2.011e-46
Identity = 100/235 (42.55%), Postives = 142/235 (60.43%), Query Frame = 0

Query:   26 EFLSLCLSHAEGLRNEQLREHFTER----YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVK---SEIKNVEKRECRMAGRTSDSLSANMRLIAGCEYDV 253
            +FL L  ++ E + + ++RE+F       Y  L  +IN+ L E  I+  K + + L Y  VD   AE++R L  EQ LV Q +E+AGNKGIW +DI++ T++ Q  + K L+ LE+R+LVKS  SISSK +KLY+L+DL P+ EITGGPWY E EFDH FI+ LS  +Y  IK      +L  I D V  SG+SKV     EI+++  +     GR  +  S  +RL AG  ++V
Sbjct:    3 KFLGLLRNYREPVTDAEVREYFQAEGGGGYELLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKAHTNIPQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSI-IQTLMYDGRVEEVRS--VRLTAGASHEV 232          

BLAST of EWM26924.1 vs. NCBI_GenBank
Match: gi|570965727|gb|ETP28846.1| (hypothetical protein F442_21929 [Phytophthora parasitica P10297])

HSP 1 Score: 165.622 bits (418), Expect = 3.025e-46
Identity = 99/235 (42.13%), Postives = 141/235 (60.00%), Query Frame = 0

Query:   26 EFLSLCLSHAEGLRNEQLREHFTER----YLHLVPIINSCLAENLIRCMKTESNELVYQAVDPNLAEKMRNLGAEQLLVYQVVEKAGNKGIWHKDIRSQTSLQQPALKKILKNLESRQLVKSTSSISSKTRKLYLLYDLEPAKEITGGPWYTEHEFDHEFIEELSRAIYHFIKQQRKPPSLGIIADYVRNSGVSKVK---SEIKNVEKRECRMAGRTSDSLSANMRLIAGCEYDV 253
            +FL L  ++ E + + ++R++F       Y  L  +IN+ L E  I+  K + + L Y  VD   AE++R L  EQ LV Q +E+AGNKGIW +DI+S T++ Q  + K L+ LE+R+LVKS  SISSK +KLY+L+DL P+ EITGGPWY E EFDH FI+ LS  +Y  IK      +L  I D V  SG+SKV     EI+++  +     GR  +  S  +RL  G  ++V
Sbjct:    3 KFLGLLKNYREPVTDAEVRDYFQAEGGGGYEQLPDVINALLTEGKIKIFK-KGSVLSYGIVDAEEAERIRGLTLEQRLVLQEIERAGNKGIWTRDIKSHTNISQQIVTKTLRLLETRRLVKSVKSISSKNKKLYMLFDLVPSTEITGGPWYNEQEFDHVFIDTLSTFVYEVIKASGM-STLNAITDKVHASGISKVALGPEEIRSI-IQTLMYDGRVEEVRS--VRLTPGASHEV 232