EWM26942.1, cds3731 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|585109086|gb|EWM26942.1| (sam domain and hd domain-containing protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 448.743 bits (1153), Expect = 1.626e-159 Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0
Query: 1 MEHGTAIFSIEHEKEAGEGGGGSRGAAAGYVRMEESLEWEDDEWQCTQDEYPSADHVGRVPFNDHLQGLVPLPPGSGRHATGGGREGGGGAKRPYPSPFSLPPLEADGKKAKAPGPSTDPPPSLPPSLPSALPPALPPRRVTRRRFDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDLLREGR 222
MEHGTAIFSIEHEKEAGEGGGGSRGAAAGYVRMEESLEWEDDEWQCTQDEYPSADHVGRVPFNDHLQGLVPLPPGSGRHATGGGREGGGGAKRPYPSPFSLPPLEADGKKAKAPGPSTDPPPSLPPSLPSALPPALPPRRVTRRRFDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDLLREGR
Sbjct: 1 MEHGTAIFSIEHEKEAGEGGGGSRGAAAGYVRMEESLEWEDDEWQCTQDEYPSADHVGRVPFNDHLQGLVPLPPGSGRHATGGGREGGGGAKRPYPSPFSLPPLEADGKKAKAPGPSTDPPPSLPPSLPSALPPALPPRRVTRRRFDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDLLREGR 222
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|1199340995|ref|XP_012714411.2| (deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like, partial [Fundulus heteroclitus]) HSP 1 Score: 83.1889 bits (204), Expect = 8.990e-17 Identity = 41/78 (52.56%), Postives = 55/78 (70.51%), Query Frame = 0
Query: 140 RVTRRRFDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
R + F+ ++G + M+ L + IIDTPQFQRL +I QLG VY GATH+R +HS+GVA+LAGE V L+ NQP+L
Sbjct: 15 RRDYKVFNDPIHGLVKMDPLLVKIIDTPQFQRLRNIRQLGGKSYVYPGATHSRFEHSIGVAYLAGELVHALMENQPEL 92
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|1020571528|ref|XP_016113763.1| (PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [Sinocyclocheilus grahami]) HSP 1 Score: 87.8113 bits (216), Expect = 1.449e-16 Identity = 46/83 (55.42%), Postives = 56/83 (67.47%), Query Frame = 0
Query: 135 ALPPRRVTRRRFDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
L + R+ F+ ++G I + L + IIDTPQFQRL I QLG LVY GATHTR +HSLGVAHLAG +KTL NQP+L
Sbjct: 31 CLDFSKDIRKTFNDPIHGQIELHPLLVKIIDTPQFQRLRYIKQLGTKYLVYPGATHTRFEHSLGVAHLAGCLLKTLHENQPEL 113
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|908423295|ref|XP_013073030.1| (PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [Biomphalaria glabrata]) HSP 1 Score: 86.6557 bits (213), Expect = 2.693e-16 Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 0
Query: 150 LYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
++G I + CLAIIDTPQFQRL I QLG C VY GA+H R +HSLGV +LAG+F +TL +NQP L
Sbjct: 142 IHGLIKLHPACLAIIDTPQFQRLRYIKQLGMCYYVYPGASHNRFEHSLGVCYLAGQFARTLQKNQPYL 209
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|1126209302|ref|XP_019638355.1| (PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [Branchiostoma belcheri]) HSP 1 Score: 87.0409 bits (214), Expect = 2.864e-16 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 150 LYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
++G I M LC+ IIDTPQFQRL I QLGAC V+ GA+H R +H LGV HLAG VKTL + QP+L
Sbjct: 115 IHGHIEMHPLCIKIIDTPQFQRLRFIKQLGACYWVFPGASHNRFEHCLGVCHLAGCLVKTLRKRQPEL 182
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|1199343227|ref|XP_021170898.1| (deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like, partial [Fundulus heteroclitus]) HSP 1 Score: 80.8777 bits (198), Expect = 4.102e-16 Identity = 43/91 (47.25%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 131 ALPPALPPRRVTRRR----FDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
A P + + T RR F+ ++G + M+ L + IIDTP FQRL +I QLG VY GATH+R +HS+GVA+LAGE V+ L+ NQ +L
Sbjct: 2 AAPQSTADKTKTSRRDYKVFNDPIHGLVKMDPLLVKIIDTPHFQRLRNIKQLGGTSYVYPGATHSRFEHSIGVAYLAGELVQALMENQREL 92
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|966640207|gb|KTF75121.1| (hypothetical protein cypCar_00042523 [Cyprinus carpio]) HSP 1 Score: 84.3445 bits (207), Expect = 4.156e-16 Identity = 45/74 (60.81%), Postives = 53/74 (71.62%), Query Frame = 0
Query: 144 RRFDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
R F+ ++G I + L + +IDTPQFQRL I QLG LVY GATHTR +HSLGVAHLAG +KTL NQPDL
Sbjct: 18 RIFNDPVHGHIELHPLLVKMIDTPQFQRLRHIKQLGTKYLVYPGATHTRFEHSLGVAHLAGCLLKTLDENQPDL 91
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|908489160|ref|XP_013094753.1| (PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like, partial [Biomphalaria glabrata]) HSP 1 Score: 86.6557 bits (213), Expect = 4.856e-16 Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = 0
Query: 150 LYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
++G I + CLAIIDTPQFQRL +I QLG C VY GA H R +HSLGV +LAG+F +TL +NQP L
Sbjct: 109 IHGHIELHPACLAIIDTPQFQRLRNIKQLGMCYHVYPGAAHNRFEHSLGVCYLAGQFARTLQKNQPYL 176
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|260819264|ref|XP_002604957.1| (hypothetical protein BRAFLDRAFT_126695 [Branchiostoma floridae] >gi|229290286|gb|EEN60967.1| hypothetical protein BRAFLDRAFT_126695 [Branchiostoma floridae]) HSP 1 Score: 86.2705 bits (212), Expect = 5.496e-16 Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
Query: 150 LYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
++G I M LC+ IIDTPQFQRL I QLGAC V+ GA+H R +H LGV HLAG VKTL + QP+L
Sbjct: 117 IHGHIEMHPLCIKIIDTPQFQRLRFIKQLGACYWVFPGASHNRFEHCLGVYHLAGCLVKTLRKRQPEL 184
BLAST of EWM26942.1 vs. NCBI_GenBank
Match: gi|780109528|ref|XP_011676295.1| (PREDICTED: deoxynucleoside triphosphate triphosphohydrolase SAMHD1-like [Strongylocentrotus purpuratus]) HSP 1 Score: 81.2629 bits (199), Expect = 5.615e-16 Identity = 39/82 (47.56%), Postives = 55/82 (67.07%), Query Frame = 0
Query: 136 LPPRRVTRRRFDCNLYGPIYMEGLCLAIIDTPQFQRLGSIAQLGACPLVYRGATHTRLQHSLGVAHLAGEFVKTLVRNQPDL 217
+ P+ + + F+ +++G I + L + IIDTPQFQRL I QLG C V+ GA H R +HSLGV +LAG V++L R QP+L
Sbjct: 17 ISPQSLKTKVFNDSVHGHIDFDPLLIEIIDTPQFQRLRFIKQLGCCYFVFPGAAHNRFEHSLGVCYLAGMLVRSLQRKQPEL 98 The following BLAST results are available for this feature:
BLAST of EWM26942.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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