EWM26948.1, cds3724 (CDS) Nannochloropsis gaditana

Overview
NameEWM26948.1
Unique Namecds3724
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1090461..1090487 +
Alignment locationCM002461.1:1090707..1091546 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26948.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100929g1.2080.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1090461..1090487 +
CM002461.1supercontigCM002461.1:1090707..1091546 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM26948.1 vs. NCBI_GenBank
Match: gi|585109097|gb|EWM26948.1| (hypothetical protein Naga_100929g1 [Nannochloropsis gaditana])

HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
Query:    1 MAFGFLQLHGYEDPYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRRARPVSMASGHTNLEAGKRGSGSLAAGNVGADGKGASLGVEGEDDLGRAKAQTEAPIAPANATVPFSILISYIGVGSQGLVDSGINLFELATEVDATDTAGGQVVPSSHLSVLGKNNEQLLVEFELPVDSPFVEEGVLRILRYAYRNRPCPPTEVENPHVGTWCGLYSFPEGVPALPFVQDV 288
            MAFGFLQLHGYEDPYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRRARPVSMASGHTNLEAGKRGSGSLAAGNVGADGKGASLGVEGEDDLGRAKAQTEAPIAPANATVPFSILISYIGVGSQGLVDSGINLFELATEVDATDTAGGQVVPSSHLSVLGKNNEQLLVEFELPVDSPFVEEGVLRILRYAYRNRPCPPTEVENPHVGTWCGLYSFPEGVPALPFVQDV
Sbjct:    1 MAFGFLQLHGYEDPYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRRARPVSMASGHTNLEAGKRGSGSLAAGNVGADGKGASLGVEGEDDLGRAKAQTEAPIAPANATVPFSILISYIGVGSQGLVDSGINLFELATEVDATDTAGGQVVPSSHLSVLGKNNEQLLVEFELPVDSPFVEEGVLRILRYAYRNRPCPPTEVENPHVGTWCGLYSFPEGVPALPFVQDV 288          
BLAST of EWM26948.1 vs. NCBI_GenBank
Match: gi|553183341|ref|XP_005853879.1| (hypothetical protein NGA_0471500 [Nannochloropsis gaditana CCMP526] >gi|422295177|gb|EKU22476.1| hypothetical protein NGA_0471500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 567.385 bits (1461), Expect = 0.000e+0
Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
Query:   10 GYEDPYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRRARPVSMASGHTNLEAGKRGSGSLAAGNVGADGKGASLGVEGEDDLGRAKAQTEAPIAPANATVPFSILISYIGVGSQGLVDSGINLFELATEVDATDTAGGQVVPSSHLSVLGKNNEQLLVEFELPVDSPFVEEGVLRILRYAYRNRPCPPTEVENPHVGTWCGLYSFPEGVPALPFVQDV 288
            GYEDPYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRRARPVSMASGHTNLEAGKRGSGSLAAGNVGADGKGASLGVEGEDDLGRAKAQTEAPIAPANATVPFSILISYIGVGSQGLVDSGINLFELATEVDATDTAGGQVVPSSHLSVLGKNNEQLLVEFELPVDSPFVEEGVLRILRYAYRNRPCPPTEVENPHVGTWCGLYSFPEGVPALPFVQDV
Sbjct:  192 GYEDPYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRRARPVSMASGHTNLEAGKRGSGSLAAGNVGADGKGASLGVEGEDDLGRAKAQTEAPIAPANATVPFSILISYIGVGSQGLVDSGINLFELATEVDATDTAGGQVVPSSHLSVLGKNNEQLLVEFELPVDSPFVEEGVLRILRYAYRNRPCPPTEVENPHVGTWCGLYSFPEGVPALPFVQDV 470          
BLAST of EWM26948.1 vs. NCBI_GenBank
Match: gi|551599229|ref|XP_005781482.1| (hypothetical protein EMIHUDRAFT_234288 [Emiliania huxleyi CCMP1516] >gi|485634257|gb|EOD29053.1| hypothetical protein EMIHUDRAFT_234288 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 64.3142 bits (155), Expect = 6.687e-8
Identity = 44/114 (38.60%), Postives = 56/114 (49.12%), Query Frame = 0
Query:    1 MAFGFLQLHGYED-------PYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRR 107
             AFG +QL G  D       P      Q    GS+          P+TF+A+A+DL D ASPFG+VH R+K+E G RLA AA    Y +     GP+ +  V      D GRRR
Sbjct:  363 FAFGVVQLAGDVDEKAPIALPIFRWLGQTQGFGSL-----PNTKMPNTFLASAFDLGDAASPFGSVHSRHKKEVGERLALAARRWAYREPSITAGPILQSAV-----ADAGRRR 466          
BLAST of EWM26948.1 vs. NCBI_GenBank
Match: gi|617592346|ref|XP_007520752.1| (PREDICTED: sialate O-acetylesterase [Erinaceus europaeus])

HSP 1 Score: 63.929 bits (154), Expect = 7.689e-8
Identity = 41/105 (39.05%), Postives = 55/105 (52.38%), Query Frame = 0
Query:    3 FGFLQLHGYEDPYMDITAQGVEVGSIRLAQYS------GLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKG 101
            FGF+QL  YE    D T+   +   IR  Q +       +  P+TFMA A DL D +SPFG++H R+KQ    RL   ALA GYG+     GP+   I  +  +G
Sbjct:  318 FGFVQLSSYET---DRTSDE-KFPEIRWHQTADFGYAPNIKMPNTFMAVAMDLGDRSSPFGSIHPRDKQTVAYRLLLGALAVGYGEKLLFQGPMPEKIQFMEHEG 418          
BLAST of EWM26948.1 vs. NCBI_GenBank
Match: gi|551551819|ref|XP_005763331.1| (hypothetical protein EMIHUDRAFT_104986 [Emiliania huxleyi CCMP1516] >gi|485612659|gb|EOD10902.1| hypothetical protein EMIHUDRAFT_104986 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 63.5438 bits (153), Expect = 1.134e-7
Identity = 44/114 (38.60%), Postives = 56/114 (49.12%), Query Frame = 0
Query:    1 MAFGFLQLHGYED-------PYMDITAQGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYGKGGSMLGPVARDIVVVVGKGDGGRRR 107
             AFG +QL G  D       P      Q    GS+          P+TF+A+A+DL D ASPFG+VH R+K+E G RLA AA    Y +     GP+ +  V      D GRRR
Sbjct:  416 FAFGVVQLAGDVDEKAPIALPIFRWLGQTQGFGSL-----PNTKMPNTFLASAFDLGDAASPFGSVHSRHKKEVGERLALAARRWAYREPSITAGPILQSAV-----ADAGRRR 519          
BLAST of EWM26948.1 vs. NCBI_GenBank
Match: gi|658882748|ref|XP_008424212.1| (PREDICTED: sialate O-acetylesterase [Poecilia reticulata])

HSP 1 Score: 61.2326 bits (147), Expect = 6.069e-7
Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    3 FGFLQLHGY-----EDPYMDITA-QGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYG-KGGSMLGPVARDIV 95
            FGF+QL  Y     +D + DI   Q  +VG +       +   +TFMA A+DL D+ SP+G +H R+KQ+   RL   A A  YG KG S  GP  + IV
Sbjct:  309 FGFVQLSTYKESATDDGFPDIRWHQTADVGFV-----PNIRMKNTFMAVAFDLPDNTSPYGTIHPRDKQDVAHRLTLGARAVAYGEKGVSFQGPFPKVIV 403          
BLAST of EWM26948.1 vs. NCBI_GenBank
Match: gi|961978037|ref|XP_014871091.1| (PREDICTED: sialate O-acetylesterase [Poecilia latipinna])

HSP 1 Score: 61.2326 bits (147), Expect = 6.238e-7
Identity = 40/100 (40.00%), Postives = 54/100 (54.00%), Query Frame = 0
Query:    3 FGFLQLHGY-----EDPYMDITA-QGVEVGSIRLAQYSGLTAPHTFMAAAYDLNDDASPFGAVHFRNKQEAGARLARAALANGYG-KGGSMLGPVARDIV 95
            FGF+QL  Y     +D + DI   Q  +VG +       +   +TFMA A+DL D+ SP+G +H R+KQ+   RL   A A  YG KG S  GP  + IV
Sbjct:  309 FGFVQLSTYKESATDDGFPDIRWHQTADVGFV-----PNIRMKNTFMAVAFDLPDETSPYGTIHPRDKQDVAYRLTLGARAVAYGEKGISFQGPFPKVIV 403          
The following BLAST results are available for this feature:
BLAST of EWM26948.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585109097|gb|EWM26948.1|0.000e+0100.00hypothetical protein Naga_100929g1 [Nannochloropsi... [more]
gi|553183341|ref|XP_005853879.1|0.000e+0100.00hypothetical protein NGA_0471500 [Nannochloropsis ... [more]
gi|551599229|ref|XP_005781482.1|6.687e-838.60hypothetical protein EMIHUDRAFT_234288 [Emiliania ... [more]
gi|617592346|ref|XP_007520752.1|7.689e-839.05PREDICTED: sialate O-acetylesterase [Erinaceus eur... [more]
gi|551551819|ref|XP_005763331.1|1.134e-738.60hypothetical protein EMIHUDRAFT_104986 [Emiliania ... [more]
gi|658882748|ref|XP_008424212.1|6.069e-740.00PREDICTED: sialate O-acetylesterase [Poecilia reti... [more]
gi|961978037|ref|XP_014871091.1|6.238e-740.00PREDICTED: sialate O-acetylesterase [Poecilia lati... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3733rna3733Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications