EWM26951.1, cds3722 (CDS) Nannochloropsis gaditana

Overview
NameEWM26951.1
Unique Namecds3722
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1078959..1079564 -

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Properties
Property NameValue
Protein idEWM26951.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100304g1.3097.mrna
GbkeyCDS
End range.
End range1079564
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1078959..1079564 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006102Glyco_hydro_2_Ig-like
Homology
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BLAST of EWM26951.1 vs. NCBI_GenBank
Match: gi|585109105|gb|EWM26951.1| (hypothetical protein Naga_100304g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 398.282 bits (1022), Expect = 3.201e-140
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0 
Query:    1 PPSLPPSLPPSLAVVHFTVLKDVVLPHATLQIDASPAPSAPSSRLELRVHADNTALFVFVEAMGHPGIFSDNAFHLRKDEVKSIIFTPRNGPMSGGREEFLASLRVRSLWDTVSEGGTEVGAEGGGVAETKHKTVADADVGEANRAMVRGEESGGNRMQVMRSSAGVEEGLGAEGREGGREGGREGGVRKLRGGAEDSKEF 201
            PPSLPPSLPPSLAVVHFTVLKDVVLPHATLQIDASPAPSAPSSRLELRVHADNTALFVFVEAMGHPGIFSDNAFHLRKDEVKSIIFTPRNGPMSGGREEFLASLRVRSLWDTVSEGGTEVGAEGGGVAETKHKTVADADVGEANRAMVRGEESGGNRMQVMRSSAGVEEGLGAEGREGGREGGREGGVRKLRGGAEDSKEF
Sbjct:    1 PPSLPPSLPPSLAVVHFTVLKDVVLPHATLQIDASPAPSAPSSRLELRVHADNTALFVFVEAMGHPGIFSDNAFHLRKDEVKSIIFTPRNGPMSGGREEFLASLRVRSLWDTVSEGGTEVGAEGGGVAETKHKTVADADVGEANRAMVRGEESGGNRMQVMRSSAGVEEGLGAEGREGGREGGREGGVRKLRGGAEDSKEF 201
The following BLAST results are available for this feature:
BLAST of EWM26951.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109105|gb|EWM26951.1|3.201e-140100.00hypothetical protein Naga_100304g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3731rna3731Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications