EWM26953.1, cds3719 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|585109107|gb|EWM26953.1| (hypothetical protein Naga_100304g4 [Nannochloropsis gaditana]) HSP 1 Score: 265.003 bits (676), Expect = 7.595e-90 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
Query: 1 MMDPSMMQAQMAASTSNPESNDLSSRSQLFSPAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
MMDPSMMQAQMAASTSNPESNDLSSRSQLFSPAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY
Sbjct: 1 MMDPSMMQAQMAASTSNPESNDLSSRSQLFSPAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|673042719|ref|XP_008875320.1| (hypothetical protein H310_10663 [Aphanomyces invadans] >gi|574468993|gb|ETV96009.1| hypothetical protein H310_10663 [Aphanomyces invadans]) HSP 1 Score: 77.411 bits (189), Expect = 5.363e-16 Identity = 40/107 (37.38%), Postives = 60/107 (56.07%), Query Frame = 0
Query: 24 SSRSQLFS-PAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
+ FS V N +VE + M + +G+ AGV+G+T QG + + +TS+ LL K+K V Y KWY+FL H++SF+LFWT+GY ++HIY
Sbjct: 5 QESQEFFSVENVQKNEGVVEFTQTAMCVVSGSMAGVIGLTAF-QGFAFMVALYVVTSVALLAKMKF--DVETYFNMKWYSFLFYGIGGHVVSFILFWTLGYGMVHIY 108
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|698795400|ref|XP_009830729.1| (hypothetical protein H257_07016 [Aphanomyces astaci] >gi|574114305|gb|ETV79793.1| hypothetical protein H257_07016 [Aphanomyces astaci]) HSP 1 Score: 76.6406 bits (187), Expect = 1.061e-15 Identity = 40/104 (38.46%), Postives = 58/104 (55.77%), Query Frame = 0
Query: 27 SQLFS-PAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
+ FS V N +VE + M + AG+ AGV+G+T G ++ + TS+ LL K+K V Y KWY+FL H +SF+LFWT+GY ++HIY
Sbjct: 8 QEFFSVENVQKNEGVVEFAQTAMCVVAGSMAGVIGLTAF-HGFVFMVVLYVFTSVALLAKMKF--DVETYFNMKWYSFLFYGIGGHFVSFVLFWTLGYGMVHIY 108
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|1173957513|gb|OQS04022.1| (hypothetical protein THRCLA_20997 [Thraustotheca clavata]) HSP 1 Score: 73.559 bits (179), Expect = 1.792e-14 Identity = 43/107 (40.19%), Postives = 63/107 (58.88%), Query Frame = 0
Query: 24 SSRSQLFS-PAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
++ ++ FS +A N E R MS+ +G+ AGV+G+TG+ QG I+ +TLTS LL K+K+ S Y +F A HL+SF+LFWT+ Y L+HIY
Sbjct: 5 AAGTEFFSMENMAKNEAAAEFTRTAMSVVSGSIAGVMGLTGL-QGFGCMIVLYTLTSGALLAKMKM--DCSPYFNMNALSFTFAGIGGHLVSFILFWTLAYGLVHIY 108
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|1173945420|gb|OQR94047.1| (hypothetical protein ACHHYP_01891 [Achlya hypogyna]) HSP 1 Score: 68.5514 bits (166), Expect = 1.789e-12 Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 0
Query: 27 SQLFS-PAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
++ FS +A N +VE MS+ +G+ AGV+G+TG+ QG ++ + LTS LL K+ L V+ Y +FL HL+SF+LFWT+ Y L+HIY
Sbjct: 8 TEFFSMENMAKNEGVVEFTHTAMSVVSGSLAGVMGLTGV-QGFVCMVVLYLLTSGALLAKMGL--DVAPYFNMNVASFLFHGIGGHLVSFILFWTLAYGLVHIY 108
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|1023275429|gb|KZT70292.1| (hypothetical protein DAEQUDRAFT_764748 [Daedalea quercina L-15889]) HSP 1 Score: 67.781 bits (164), Expect = 3.760e-12 Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 0
Query: 11 MAASTSNPESNDLSSRSQLFSPAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
M+A+T+ + L LF P V +NA + ++ L S FAGA AGVLG+ + G +FI+ LTS L K K G+ + Y+P W+ L+ ++ SF+L WT+ Y ++H+Y
Sbjct: 1 MSATTTPDQQAQL-----LFPPNVQYNAARIYSIKFLSSCFAGAVAGVLGLENSL-GFALFILATLLTSACLYVKCK--GRPAKYIPGGWWE-LINPGQENISSFILVWTLFYGIVHVY 110
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|729365602|ref|XP_010546958.1| (PREDICTED: ER membrane protein complex subunit 6 [Tarenaya hassleriana]) HSP 1 Score: 67.781 bits (164), Expect = 4.288e-12 Identity = 41/124 (33.06%), Postives = 65/124 (52.42%), Query Frame = 0
Query: 7 MQAQMAASTSNPESNDLSSRSQLFSPA-VAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
M + +S S D S Q FS + +N +I+++ R +SI G AG+LG TG+ G +++ ++TS+GLL K G ++N W L L+SF+LFWT Y ++HI+
Sbjct: 1 MGGHNDSGSSEKRSKDAMSEIQTFSAENMQNNLRILQNSRTFLSIIGGVIAGILGFTGL-TGFVFYVLLMSITSVGLLAK---AGFLANTYFDSWNRVLFDGFLGGLMSFVLFWTFAYDIVHIF 120
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|1001608928|gb|KXS12720.1| (transmembrane protein 93-like protein [Gonapodya prolifera JEL478]) HSP 1 Score: 67.781 bits (164), Expect = 4.514e-12 Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 0
Query: 11 MAASTSNPESNDLS-SRSQLFSPAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
MA S + P ++ S PAV HNAQ++ +R ++ G AAG+L +TG G +++ L GL+ + GK Y T W + D + LSF+LFWT+ Y+++HIY
Sbjct: 1 MATSNAPPSPTYVALSTPAYHEPAVRHNAQVISQLRSSVAAVLGIAAGILNLTGF-AGFAFYLVASVLVG-GLILALMAGGKADVYF-TDWSGPWIGDVGGNALSFVLFWTLAYSVVHIY 117
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|527300022|gb|EPT00819.1| (hypothetical protein FOMPIDRAFT_1049328 [Fomitopsis pinicola FP-58527 SS1]) HSP 1 Score: 66.2402 bits (160), Expect = 1.153e-11 Identity = 39/101 (38.61%), Postives = 59/101 (58.42%), Query Frame = 0
Query: 29 LFSPAVAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
LF P V +NA V ++ L S FAGA AG+LG+ + G ++I+ LTS L K K G+ + Y+P W+ LV ++ SF+L WT+ Y ++H+Y
Sbjct: 14 LFPPNVQYNASRVYSIKFLSSCFAGAVAGILGLENSL-GFALYILATLLTSACLYVKCK--GRPAKYIPGGWWE-LVNPGQENISSFILVWTLFYGIVHVY 110
BLAST of EWM26953.1 vs. NCBI_GenBank
Match: gi|567852339|ref|XP_006419333.1| (hypothetical protein CICLE_v10006078mg [Citrus clementina] >gi|567852343|ref|XP_006419335.1| hypothetical protein CICLE_v10006078mg [Citrus clementina] >gi|568871252|ref|XP_006488804.1| PREDICTED: ER membrane protein complex subunit 6 isoform X2 [Citrus sinensis] >gi|568871254|ref|XP_006488805.1| PREDICTED: ER membrane protein complex subunit 6 isoform X2 [Citrus sinensis] >gi|568871256|ref|XP_006488806.1| PREDICTED: ER membrane protein complex subunit 6 isoform X2 [Citrus sinensis] >gi|985463617|ref|XP_015388926.1| PREDICTED: ER membrane protein complex subunit 6 isoform X2 [Citrus sinensis] >gi|557521206|gb|ESR32573.1| hypothetical protein CICLE_v10006078mg [Citrus clementina] >gi|557521208|gb|ESR32575.1| hypothetical protein CICLE_v10006078mg [Citrus clementina]) HSP 1 Score: 65.855 bits (159), Expect = 2.496e-11 Identity = 39/122 (31.97%), Postives = 69/122 (56.56%), Query Frame = 0
Query: 9 AQMAASTSNPESNDLSSRSQLFSPA-VAHNAQIVEHVRGLMSIFAGAAAGVLGVTGIIQGACVFIIFHTLTSLGLLTKIKLTGKVSNYLPTKWYAFLVADAANHLLSFLLFWTMGYTLIHIY 129
A + S + +SND+S+ Q+F+ + N +++ + R +SI G AG+LG TG++ G + + +TS+ L+ K K + V +Y + W L+ L+SF+LFWT Y ++HI+
Sbjct: 2 ATHSDSVAGKKSNDVSNDLQIFNAENLQSNMKVIYYSRTFLSIIGGVIAGILGFTGLM-GFVFYFLIMAITSVCLMAKAKFS--VHSYFDS-WNRILLDGFLGGLMSFVLFWTFAYDIVHIF 119 The following BLAST results are available for this feature:
BLAST of EWM26953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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