EWM26958.1, cds3715 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|585109113|gb|EWM26958.1| (wd40 repeat-containing protein smu1 [Nannochloropsis gaditana]) HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
Query: 1 MCWTPMPMFRSYSRPLCPLSGLHAASCCRSSWPGGHDGATVPLKMFSLFVVLFPFPPYEKLTEPSSAFRFAPSSSSSENLSPPLQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA 256
MCWTPMPMFRSYSRPLCPLSGLHAASCCRSSWPGGHDGATVPLKMFSLFVVLFPFPPYEKLTEPSSAFRFAPSSSSSENLSPPLQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA
Sbjct: 1 MCWTPMPMFRSYSRPLCPLSGLHAASCCRSSWPGGHDGATVPLKMFSLFVVLFPFPPYEKLTEPSSAFRFAPSSSSSENLSPPLQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA 256
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|553180209|ref|XP_005853364.1| (smu-1 suppressor of mec-8 and unc-52-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295700|gb|EKU22999.1| smu-1 suppressor of mec-8 and unc-52-like protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 358.992 bits (920), Expect = 2.402e-118 Identity = 172/173 (99.42%), Postives = 173/173 (100.00%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA 256
L+EFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA
Sbjct: 402 LKEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA 574
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|298710884|emb|CBJ26393.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 207.223 bits (526), Expect = 4.146e-60 Identity = 93/173 (53.76%), Postives = 128/173 (73.99%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWRA 256
L+EFRGH+S+VN + DG++++TGS+DGTVKVWDA+++E LHTF P + EA VHTV PLPG A+ ++NRTSTA++ T QGQVV+ +S K V DF A LSPKG + +CAGEDG ++ F ++E +KV EKE+IG+AHHPHRNL+ TF +EG+LK+W++
Sbjct: 344 LKEFRGHTSYVNTAVYMHDGAKVVTGSADGTVKVWDAKTTENLHTFHPALSIGSHTEASVHTVRPLPGSAEQVLVSNRTSTAFLCTLQGQVVRSFTSPKSVRADFTCACLSPKGRWVYCAGEDGELFCFDAATTEVEKTLKVSEKEIIGLAHHPHRNLLATFSNEGLLKLWKS 516
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|1098777840|ref|XP_018849489.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1-like [Juglans regia]) HSP 1 Score: 192.2 bits (487), Expect = 7.580e-55 Identity = 94/178 (52.81%), Postives = 122/178 (68.54%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRP------GVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWR 255
L+EFRGHSS+VN FT DGSR++T SSD TVKVWDA++++CL TF+P G +A V++V P D + N+TS+ Y+ T QGQVVK SSGK+ GGDFAAA +SPKG + +C GED +Y F G LE +KV EK+VIGV HHPHRNLV TFG++ +K+W+
Sbjct: 286 LKEFRGHSSYVNDAIFTTDGSRVITASSDCTVKVWDAKTTDCLQTFKPPPPLRGG-------DASVNSVHLFPKNTDHIIVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFAAACVSPKGEWIYCVGEDRNMYCFSYQSGKLEHLLKVHEKDVIGVTHHPHRNLVATFGEDCTMKLWK 456
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|1142673768|gb|ONM31811.1| (Suppressor of mec-8 and unc-52 protein homolog 1 [Zea mays]) HSP 1 Score: 186.037 bits (471), Expect = 6.070e-54 Identity = 89/178 (50.00%), Postives = 121/178 (67.98%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRP------GVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWR 255
L+EFRGHSS+VN FT DGSR++T SSD TVKVWD ++++CLHTF+P G +A V++V P D + N+TS+ ++ T QGQVVK SSGK+ GGDF AA++SPKG + +C GED +Y F G LE +KV EK+VIG+ HHPHRNLV T ++ ++K+W+
Sbjct: 150 LKEFRGHSSYVNYAIFTTDGSRVITASSDCTVKVWDTKTTDCLHTFKPPPPLRGG-------DASVNSVHLFPKNTDHIVVCNKTSSIFIMTLQGQVVKSFSSGKREGGDFVAASVSPKGEWIYCVGEDMNMYCFSYQSGKLEHLMKVHEKDVIGITHHPHRNLVATIAEDCMMKIWK 320
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|502152363|ref|XP_004508892.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 isoform X2 [Cicer arietinum]) HSP 1 Score: 188.734 bits (478), Expect = 6.369e-54 Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRP------GVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWR 255
L+EFRGH+S+VN FT DGSR++T SSD TVKVWD ++++C+ TF+P G +A V++V P D + N+TS+ Y+ T QGQVVK SSGK+ GGDF AA +SPKG + +C GED +Y F G LE +KV EKE+IGV HHPHRNLV TF ++G +K+W+
Sbjct: 258 LKEFRGHTSYVNDATFTSDGSRVITASSDCTVKVWDLKTTDCIQTFKPPPPLRGG-------DASVNSVYIFPKNTDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMKVHEKEIIGVTHHPHRNLVATFSEDGTMKLWK 428
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|1035945797|gb|OAY70338.1| (Suppressor of mec-8 and unc-52 protein [Ananas comosus]) HSP 1 Score: 191.045 bits (484), Expect = 6.621e-54 Identity = 91/178 (51.12%), Postives = 122/178 (68.54%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRP------GVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWR 255
L+EFRGH+S+VN +T DGSR++T SSD TVKVWD +S++CLHTF+P G +A V++V P + + N+TS+ Y+ T QGQVVK SSGK+ GGDF AA +SPKG + +C GED +Y F G LE +KV EK+VIGV HHPHRNLVVT+G++ +K+W+
Sbjct: 352 LKEFRGHTSYVNNAIYTNDGSRVITASSDCTVKVWDMKSTDCLHTFKPPPPLRGG-------DASVNSVHLFPKNTEHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACVSPKGEWIYCVGEDMNIYCFSHQTGKLEHLMKVHEKDVIGVTHHPHRNLVVTYGEDCTMKIWK 522
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|449441804|ref|XP_004138672.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Cucumis sativus]) HSP 1 Score: 190.66 bits (483), Expect = 8.061e-54 Identity = 92/178 (51.69%), Postives = 122/178 (68.54%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRP------GVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWR 255
L+EFRGHSS+VN FT DG+R++T SSD TVKVWD ++++CLHTF+P G +A V++V P AD + N+TS+ Y+ T QGQVVK SSGK+ GGDF AA LSPKG + +C GED +Y F G LE +KV EK+VIGV+HHPHRNLV T+ ++ +K+W+
Sbjct: 342 LKEFRGHSSYVNDAVFTNDGARVITASSDCTVKVWDVKTTDCLHTFKPPPPLRGG-------DASVNSVHIFPKNADHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACLSPKGEWIYCIGEDRNMYCFSHQSGKLEHLMKVHEKDVIGVSHHPHRNLVATYSEDSTMKLWK 512
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|694649920|ref|XP_009481818.1| (PREDICTED: WD40 repeat-containing protein SMU1-like, partial [Pelecanus crispus]) HSP 1 Score: 180.644 bits (457), Expect = 1.056e-53 Identity = 82/172 (47.67%), Postives = 121/172 (70.35%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRPGVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWR 255
L+EFRGHSSFVN FTQDG +++ SSDGTVKVW+ +++EC +TF+ + S + V++V+ LP + F + NR++T + QGQ+V+ SSGK+ GGDF ALSP+G + +C GED ++Y F G LE + V EK+VIG+AHHPH+NL+ T+ ++G+LK+W+
Sbjct: 10 LKEFRGHSSFVNEATFTQDGHYIISASSDGTVKVWNVKTTECSNTFKS-LGSTAGTDITVNSVILLPKNPEHFVVCNRSNTVVIMNMQGQIVRSFSSGKREGGDFVCCALSPRGEWIYCVGEDFVLYCFSTVTGKLERTLTVHEKDVIGIAHHPHQNLIATYSEDGLLKLWK 180
BLAST of EWM26958.1 vs. NCBI_GenBank
Match: gi|502152361|ref|XP_004508891.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 isoform X1 [Cicer arietinum]) HSP 1 Score: 190.274 bits (482), Expect = 1.310e-53 Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 0
Query: 84 LQEFRGHSSFVNCICFTQDGSRLLTGSSDGTVKVWDARSSECLHTFRP------GVESAVDLEAMVHTVLPLPGGADLFFIANRTSTAYVTTAQGQVVKRMSSGKKVGGDFAAAALSPKGTFAHCAGEDGIVYSFQLGKGDLESFVKVGEKEVIGVAHHPHRNLVVTFGDEGVLKVWR 255
L+EFRGH+S+VN FT DGSR++T SSD TVKVWD ++++C+ TF+P G +A V++V P D + N+TS+ Y+ T QGQVVK SSGK+ GGDF AA +SPKG + +C GED +Y F G LE +KV EKE+IGV HHPHRNLV TF ++G +K+W+
Sbjct: 342 LKEFRGHTSYVNDATFTSDGSRVITASSDCTVKVWDLKTTDCIQTFKPPPPLRGG-------DASVNSVYIFPKNTDHIVVCNKTSSIYIMTLQGQVVKSFSSGKREGGDFVAACISPKGEWIYCVGEDRNMYCFSYQSGKLEHLMKVHEKEIIGVTHHPHRNLVATFSEDGTMKLWK 512 The following BLAST results are available for this feature:
BLAST of EWM26958.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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