EWM26959.1, cds3714 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM26959.1
Unique Name	cds3714
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	CM002461.1:1059283..1059549 +
Alignment location	CM002461.1:1059834..1060214 +
Alignment location	CM002461.1:1060414..1060665 +
Alignment location	CM002461.1:1060910..1061006 +

Link to JBrowse

Properties


Property Name	Value
End range	.
End range	1061006
Protein id	EWM26959.1
Product	wd40 repeat-containing protein smu1
Partial	true
Orig transcript id	gnl\|cribi\|Naga_101032g2.3522.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
CM002461.1	supercontig	CM002461.1:1059283..1059549 +
CM002461.1	supercontig	CM002461.1:1059834..1060214 +
CM002461.1	supercontig	CM002461.1:1060414..1060665 +
CM002461.1	supercontig	CM002461.1:1060910..1061006 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR011047	Quinonprotein_ADH-like_supfam
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom
IPR006595	CTLH_C
IPR006594	LisH
IPR001680	WD40_repeat

Homology

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|553180209|ref|XP_005853364.1| (smu-1 suppressor of mec-8 and unc-52-like protein, partial [Nannochloropsis gaditana CCMP526] >gi|422295700|gb|EKU22999.1| smu-1 suppressor of mec-8 and unc-52-like protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 684.871 bits (1766), Expect = 0.000e+0
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0

Query:    1 MSSLPTSAASGVYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            MSSLPTSAASGVYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ
Sbjct:   50 MSSLPTSAASGVYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 381

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|585109115|gb|EWM26959.1| (wd40 repeat-containing protein smu1, partial [Nannochloropsis gaditana])

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 0

Query:    1 MSSLPTSAASGVYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            MSSLPTSAASGVYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ
Sbjct:    1 MSSLPTSAASGVYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|298710884|emb|CBJ26393.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 420.239 bits (1079), Expect = 6.286e-142
Identity = 194/321 (60.44%), Postives = 257/321 (80.06%), Query Frame = 0

Query:   13 YEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIH-DAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            +EVE+ DVI+LILQF KENNL +TL  LQ+ES V +N++D+++N +SD+  GRW++V+PQ + L LP  KL+A+YEQ+ LEL+EMRE ++ARE+LRT +P   +K ++PDRY RLE +L +    D ++LY  G +KE+RR EIA+ L  EVSVVPPSRLLAL+ QAL++QQ+QG LP+ +++DLFRG AR++ KD  E+PP+K AGQIKFG+K+HPE ARFSPDG  L +GS+DGFVEVWD DTCRLRKDL YQA++E MMHD AVL  +FSRDGE LATG TDG +KVWK+S+G+CLR    AH++G+TS+AF+RD  Q
Sbjct:    3 FEVESEDVIRLILQFLKENNLTKTLRALQAESSVCLNTIDNLDNLMSDINHGRWEAVMPQVSSLSLPLAKLVAVYEQLVLELLEMRELDVAREILRTADPFLQMKKEEPDRYLRLEHWLQKGAAIDPRDLYPAGSSKEKRRAEIANMLIPEVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTKSHPEVARFSPDGQYLASGSVDGFVEVWDFDTCRLRKDLAYQAKDEFMMHDKAVLCSSFSRDGEHLATGSTDGKMKVWKVSTGQCLRRFESAHTQGVTSVAFARDGSQ 323

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|743768995|ref|XP_010914777.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Elaeis guineensis])

HSP 1 Score: 379.022 bits (972), Expect = 8.624e-126
Identity = 183/319 (57.37%), Postives = 239/319 (74.92%), Query Frame = 0

Query:   14 EVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            E+EA DVIK++LQFCKEN+LH+T  TLQSE QV++N+VDS+E F++D+  GRWD++LPQ A L+LP+ KL  LYEQ+ LE+IE+RE + AR +LR T+ + ++K + P+RY RLE  L R   D  E Y     KE+RR +IA +LA EVSVVPPSRL+AL+ QAL++QQ QG LP   ++DLFRG+A +  +DE +  P   A QIKFG K+HPECARFSPDG  LV+ S+DGFVEVWD  + +L+KDL YQA +  MMHD AVL + FSRD EMLA+G  DG +KVW++ +G+CLR L  AHS+G+TSL FSRD  Q
Sbjct:    5 EIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFVADINSGRWDAILPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEHLLVRTYFDPNEAYQES-TKEKRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEDDMYPTTLAHQIKFGKKSHPECARFSPDGQYLVSCSVDGFVEVWDYISGKLKKDLQYQADDAFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSQGVTSLTFSRDGSQ 321

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|695037203|ref|XP_009406086.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 377.481 bits (968), Expect = 3.740e-125
Identity = 182/319 (57.05%), Postives = 240/319 (75.24%), Query Frame = 0

Query:   14 EVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            E+EA DVIK++LQFCKEN+LH+T  TLQSE QV++N+VDS+E F++D+  GRWD++LPQ A L+LP+ KL  LYEQ+ LE+IE+RE + AR +LR T+ + ++K + P+RY RLE  L R   D  E Y     KE+RR +IA +LA EVSVVPPSRL+AL+ QAL++QQ QG LP+  ++DLFRG+A +  +DE +  P   A  IKFG K+HPECARFSPDG  LV+ S+DGF+EVWD  + +L+KDL YQA +  MMHD AVL + FSRD EMLA+G  DG +KVW++ +G+CLR L  AHS+G+TSL FSRDS Q
Sbjct:    5 EIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFVADINSGRWDAILPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVMKQEQPERYLRLEHLLVRTYFDPNEAYQES-TKEKRRAQIAQALAAEVSVVPPSRLMALIGQALKWQQHQGLLPQGTQFDLFRGTA-AMKQDEDDMYPTTLAHPIKFGKKSHPECARFSPDGQFLVSCSVDGFIEVWDYISGKLKKDLQYQADDAFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSQGVTSLVFSRDSSQ 321

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|1179526941|ref|XP_020684651.1| (suppressor of mec-8 and unc-52 protein homolog 1 [Dendrobium catenatum])

HSP 1 Score: 377.096 bits (967), Expect = 5.591e-125
Identity = 180/319 (56.43%), Postives = 238/319 (74.61%), Query Frame = 0

Query:   14 EVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            E+EA DVIK++LQFCKEN+LH++   LQ+E QV++N+VDS+E F++D+  GRWD++LPQ + L+LP+DKL  LYEQ+ LE+IE+RE + AR +LR T+ + ++K + P+RY RLE  L R   D  E Y     KERRR +IA +LA EVSVVPPSRL+AL+ QAL++QQ QG LP   ++DLFRG+A +  KDE +  P     QIKFG K+HPECARFSPDG  LV+ S+DGF+EVWD  + +L+KDL YQA +  MMHD AVL + FSRD EMLA+G  DG +KVW++ +G+CLR L  AHS+G+TSL FSRD  Q
Sbjct:    5 EIEARDVIKIVLQFCKENSLHQSFQVLQNECQVSLNTVDSLETFVADINSGRWDAILPQVSQLKLPRDKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDPNEAYQES-TKERRRSQIAQALASEVSVVPPSRLMALIGQALKWQQHQGMLPPGTQFDLFRGTA-AMKKDEDDIYPTTLGHQIKFGKKSHPECARFSPDGQYLVSCSVDGFIEVWDYMSGKLKKDLQYQADDSFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSQGVTSLTFSRDGSQ 321

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|1141981834|gb|ONK63057.1| (uncharacterized protein A4U43_C07F10970 [Asparagus officinalis])

HSP 1 Score: 374.785 bits (961), Expect = 7.716e-125
Identity = 177/319 (55.49%), Postives = 239/319 (74.92%), Query Frame = 0

Query:   14 EVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            E+EA DVIK++LQFCKEN+LH+T  TLQ+E QV++N+VDS+E F+SD+  GRWD++LPQ + L+LP+ KL  LYEQ+ LE+IE+RE + AR +LR T+ + ++K + P+RY RLE  L R   D  E Y     KE+RR +IA ++A EV+VVPPSRL+AL+ QAL++QQ QG LP   ++DLFRG+A +  +DE +  P     QIKFG K+HPECARFSPDG  LV+ S+DGF+EVWD  + +L+KDL YQA +  MMHD AVL + FSRD E+LA+G  DG +KVW++ +G+CL+ L HAHS+G+TSL FSRD  Q
Sbjct:    5 EIEARDVIKIVLQFCKENSLHQTFQTLQNECQVSLNTVDSLETFVSDINSGRWDAILPQVSQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDPNEAYQES-TKEKRRSQIAQAIASEVNVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEDDMYPTTLGHQIKFGKKSHPECARFSPDGQYLVSCSVDGFIEVWDYISGKLKKDLQYQADDAFMMHDDAVLCVDFSRDSEVLASGSQDGKIKVWRIRNGQCLKRLEHAHSQGVTSLTFSRDGSQ 321

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|944240687|gb|KQL04995.1| (hypothetical protein SETIT_001049mg [Setaria italica])

HSP 1 Score: 373.629 bits (958), Expect = 1.127e-124
Identity = 178/326 (54.60%), Postives = 240/326 (73.62%), Query Frame = 0

Query:    7 SAASGVYEVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            ++++   E+EA DV+K++LQFCKEN+L +T  TLQ+E QV++N+VDS++ F++D+  GRWD+VLPQ A L+LP+ KL  LYEQ+ LE+ E+RE + AR +LR T+ + ++K + P+RY RLE  L R   D  E Y     KE+RR +IA ++A EVSVVPPSRL+AL+ QAL++QQ QG LP   ++DLFRG+A +  +DE E  P   + QIKFG KTHPECARFSPDG  LV+ S+DG +EVWD  + +L+KDL YQA E  MMHD AVL + FSRD EMLA+G  DG +KVW++ +G+CLR L  AHSKG+TS+ FSRD  Q
Sbjct:    2 ASSASTLEIEARDVVKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIDTFIADINAGRWDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEQPERYLRLEHLLVRTYFDPNEAYQES-TKEKRRAQIAQAVASEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEETYPTTLSHQIKFGKKTHPECARFSPDGQYLVSCSVDGIIEVWDYISGKLKKDLQYQADESFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTGQCLRRLERAHSKGVTSVTFSRDGTQ 325

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|552823521|ref|XP_005846379.1| (hypothetical protein CHLNCDRAFT_24755, partial [Chlorella variabilis] >gi|307106030|gb|EFN54277.1| hypothetical protein CHLNCDRAFT_24755, partial [Chlorella variabilis])

HSP 1 Score: 375.941 bits (964), Expect = 1.224e-124
Identity = 186/311 (59.81%), Postives = 233/311 (74.92%), Query Frame = 0

Query:   20 VIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDS 330
            VIK+ILQFCKEN+L  + + +Q+E QV++N+VDS+E+F+SD+  GRWD VLPQ A L+LP+ KL  LYEQV LELIE+RET+ AR MLR T+    +K  D +RY RLE   NR   DA+ELY  G  +++RR ++A SL+ EVS VPPSRL+AL+ QAL++QQ QG LP    +DLFRG+A  A +DE E  P     QIKFG K+H ECA FSPDG  LVTGS+DGFVEVWD  T RL+ DLPYQA E+ M+HD+AVLA AFSRD E+LATGD DG VKVW++ +G+CLR    AHS+G+TSLAFSRD 
Sbjct:    2 VIKIILQFCKENSLAESFNAIQNECQVSLNTVDSIESFVSDINNGRWDLVLPQVANLKLPRAKLEDLYEQVVLELIELRETDTARAMLRQTQVFARMKGDDAERYLRLEHLCNRAYFDARELYG-GTPRDKRRAQLAHSLSSEVSTVPPSRLMALVGQALKWQQQQGMLPPGAAFDLFRGTAAGA-RDEVETFPADLDRQIKFGVKSHAECAAFSPDGQLLVTGSVDGFVEVWDHLTGRLKLDLPYQAEEQFMLHDSAVLAAAFSRDSELLATGDQDGRVKVWRVRTGQCLRRFDSAHSQGVTSLAFSRDG 310

[Close]

BLAST of EWM26959.1 vs. NCBI_GenBank
Match: gi|719998868|ref|XP_010255536.1| (PREDICTED: suppressor of mec-8 and unc-52 protein homolog 1 [Nelumbo nucifera])

HSP 1 Score: 375.941 bits (964), Expect = 1.657e-124
Identity = 181/319 (56.74%), Postives = 238/319 (74.61%), Query Frame = 0

Query:   14 EVEASDVIKLILQFCKENNLHRTLHTLQSESQVAMNSVDSMENFLSDVTQGRWDSVLPQAAGLQLPQDKLLALYEQVCLELIEMRETELAREMLRTTEPLQLLKTQDPDRYFRLETFLNRKIHDAQELYAYGLNKERRRQEIADSLAVEVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSKTHPECARFSPDGLQLVTGSLDGFVEVWDPDTCRLRKDLPYQAREELMMHDAAVLALAFSRDGEMLATGDTDGAVKVWKLSSGKCLRHLPHAHSKGITSLAFSRDSLQ 332
            E+EA DVIK++LQFCKEN+LH+T  TLQSE QV++N+VDS+E F++D+  GRWD++LPQ A L+LP+ KL  LYEQ+ LE+IE+RE + AR +LR T+ + ++K + P+RY RLE  L R   D  E Y     KE+RR +IA +LA EV+VVPPSRL+AL+ QAL++QQ QG LP   ++DLFRG+A +  +DE +  P   A  IKFG K+HPECARFSPDG  LV+ S+DGF+EVWD  + +L+KDL YQA +  MMHD AVL + FSRD EMLA+G  DG +KVW+L +G+CLR L  AHS+G+TSL FSRD  Q
Sbjct:    5 EIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSLETFVADINSGRWDAILPQVAQLKLPRKKLEDLYEQIVLEMIELRELDTARAILRQTQAMGVMKQEQPERYLRLEHLLVRTYFDPHEAYQDS-TKEKRRAQIAQALAAEVTVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEDDMYPTTLAHTIKFGKKSHPECARFSPDGQFLVSCSVDGFIEVWDQISGKLKKDLQYQADDAFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRLRTGQCLRRLERAHSQGVTSLVFSRDGSQ 321

The following BLAST results are available for this feature:

BLAST of EWM26959.1 vs. NCBI_GenBank

BLAST of EWM26959.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|553180209\|ref\|XP_005853364.1\|	0.000e+0	100.00	smu-1 suppressor of mec-8 and unc-52-like protein,...	[more]
gi\|585109115\|gb\|EWM26959.1\|	0.000e+0	100.00	wd40 repeat-containing protein smu1, partial [Nann...	[more]
gi\|298710884\|emb\|CBJ26393.1\|	6.286e-142	60.44	conserved unknown protein [Ectocarpus siliculosus]	[more]
gi\|743768995\|ref\|XP_010914777.1\|	8.624e-126	57.37	PREDICTED: suppressor of mec-8 and unc-52 protein ...	[more]
gi\|695037203\|ref\|XP_009406086.1\|	3.740e-125	57.05	PREDICTED: suppressor of mec-8 and unc-52 protein ...	[more]
gi\|1179526941\|ref\|XP_020684651.1\|	5.591e-125	56.43	suppressor of mec-8 and unc-52 protein homolog 1 [...	[more]
gi\|1141981834\|gb\|ONK63057.1\|	7.716e-125	55.49	uncharacterized protein A4U43_C07F10970 [Asparagus...	[more]
gi\|944240687\|gb\|KQL04995.1\|	1.127e-124	54.60	hypothetical protein SETIT_001049mg [Setaria itali...	[more]
gi\|552823521\|ref\|XP_005846379.1\|	1.224e-124	59.81	hypothetical protein CHLNCDRAFT_24755, partial [Ch...	[more]
gi\|719998868\|ref\|XP_010255536.1\|	1.657e-124	56.74	PREDICTED: suppressor of mec-8 and unc-52 protein ...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna3723	rna3723	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications