EWM26962.1, cds3711 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|585109121|gb|EWM26962.1| (coiled-coil domain-containing protein 47 [Nannochloropsis gaditana]) HSP 1 Score: 578.556 bits (1490), Expect = 0.000e+0 Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0
Query: 1 MPTAASPPPLRALLLLFWGAIGIQCMTAAAHGITDDEVEDEFLTPDPPPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVPLALPPRLARRLNEHKHFFDHIHISDQNSTPVG 287
MPTAASPPPLRALLLLFWGAIGIQCMTAAAHGITDDEVEDEFLTPDPPPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVPLALPPRLARRLNEHKHFFDHIHISDQNSTPVG
Sbjct: 1 MPTAASPPPLRALLLLFWGAIGIQCMTAAAHGITDDEVEDEFLTPDPPPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVPLALPPRLARRLNEHKHFFDHIHISDQNSTPVG 287
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|566027429|gb|ETI50340.1| (hypothetical protein F443_06114 [Phytophthora parasitica P1569]) HSP 1 Score: 92.4337 bits (228), Expect = 9.944e-18 Identity = 71/279 (25.45%), Postives = 124/279 (44.44%), Query Frame = 0
Query: 18 WGAIGIQCMTAAAHGITDDEVEDEFLTPDP------------PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVP-LALPPRLARRLNEHKHFFDHIHISDQNS 283
W +G+ + A A + DEF +P P R F T + +P + + E C + F+L F G+ +N +I +LE+ +L QF+Y G E G + +E+ + F+++ +GRR L R +A ++L+ R DL+ L V+P D +T++ GL EDV P IL + ++L +L + P+L+ +P + + + + +P AL + LNE + F ++I I+D N
Sbjct: 3 WRKVGVLALLAMAMAFVHAQETDEFDVVEPQETAAPTPSRTMPARDFTTLAKQFIPFQNPDYFVAEACSWGFGILFVLLFFVGKAQNRKIADKWLEEAEPVLRTQFSYTGSSVENG----------------MGLLEESRSNFKYFCTGRRFLTRFVA-DLELKSRHDLISRLYRIVVPTSDFLTIDVGLHGEDVDPFILGICKKLGFTALSKIFPELIETAK------QVPVKEVPESMWVSTDCTEIPKAALTHSIQASLNELEDFLEYIVITDMNK 258
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|567964715|gb|ETK90197.1| (hypothetical protein L915_05993 [Phytophthora parasitica] >gi|567993426|gb|ETL43605.1| hypothetical protein L916_05927 [Phytophthora parasitica] >gi|568053079|gb|ETM49931.1| hypothetical protein L914_05936 [Phytophthora parasitica] >gi|570331076|gb|ETO79024.1| hypothetical protein F444_06174 [Phytophthora parasitica P1976] >gi|570954850|gb|ETP20107.1| hypothetical protein F441_06122 [Phytophthora parasitica CJ01A1] >gi|570989909|gb|ETP48032.1| hypothetical protein F442_06151 [Phytophthora parasitica P10297]) HSP 1 Score: 92.0485 bits (227), Expect = 1.014e-17 Identity = 71/279 (25.45%), Postives = 124/279 (44.44%), Query Frame = 0
Query: 18 WGAIGIQCMTAAAHGITDDEVEDEFLTPDP------------PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVP-LALPPRLARRLNEHKHFFDHIHISDQNS 283
W +G+ + A A + DEF +P P R F T + +P + + E C + F+L F G+ +N +I +LE+ +L QF+Y G E G + +E+ + F+++ +GRR L R +A ++L+ R DL+ L V+P D +T++ GL EDV P IL + ++L +L + P+L+ +P + + + + +P AL + LNE + F ++I I+D N
Sbjct: 3 WRKVGVLALLAMAMAFVHAQETDEFDVVEPQETAAPTPSRTMPARDFTTLAKQFIPFQNPDYFVAEACSWGFGILFVLLFFVGKAQNRKIADKWLEEAEPVLRTQFSYTGSSVENG----------------MGLLEESRSNFKYFCTGRRFLTRFVA-DLELKSRHDLISRLYRIVVPTSDFLTIDVGLHGEDVDPFILGICKKLGFTALSKIFPELIETAK------QVPVKEVPESMWVSTDCTEIPKAALTHSIQASLNELEDFLEYIVITDMNK 258
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|568022714|gb|ETL96778.1| (hypothetical protein L917_05816 [Phytophthora parasitica]) HSP 1 Score: 92.0485 bits (227), Expect = 1.272e-17 Identity = 71/279 (25.45%), Postives = 124/279 (44.44%), Query Frame = 0
Query: 18 WGAIGIQCMTAAAHGITDDEVEDEFLTPDP------------PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVP-LALPPRLARRLNEHKHFFDHIHISDQNS 283
W +G+ + A A + DEF +P P R F T + +P + + E C + F+L F G+ +N +I +LE+ +L QF+Y G E G + +E+ + F+++ +GRR L R +A ++L+ R DL+ L V+P D +T++ GL EDV P IL + ++L +L + P+L+ +P + + + + +P AL + LNE + F ++I I+D N
Sbjct: 3 WRKVGVLALLAMAMAFVHAQETDEFDVVEPQETAAPTPSRTMPARDFTTLAKQFIPFQNPDYFVAEACSWGFGILFVLLFFVGKAQNRKIADKWLEEAEPVLRTQFSYTGSSVENG----------------MGLLEESRSNFKYFCTGRRFLTRFVA-DLELKSRHDLISRLYRIVVPTSDFLTIDVGLHGEDVGPFILGICKKLGFTALSKIFPELIETAK------QVPVKEVPESMWVSTDCTEIPKAALTHSIQASLNELEDFLEYIVITDMNK 258
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|1214712211|gb|OWZ23167.1| (hypothetical protein PHMEG_0002004 [Phytophthora megakarya]) HSP 1 Score: 90.8929 bits (224), Expect = 2.903e-17 Identity = 71/279 (25.45%), Postives = 126/279 (45.16%), Query Frame = 0
Query: 18 WGAIGIQCMTAAAHGITDDEVEDEFLTPDP------------PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVPLA-LPPRLARRLNEHKHFFDHIHISDQNS 283
W +G+ + A A + DEF +P PR FAT + +P + + E + FL+ + G+ +N RI +LE+ +L QF+Y G E G + +E+ + F+++ +GRR L R + ++L+ R DL + ++P D +T++ GL EDV P IL +S++L +L + P+L+ V + ++ + +VV + +P A L + LNE + F ++I I+D N
Sbjct: 3 WRKVGVLALLAVAMAFVHAQEADEFDVAEPQETAAPTSAQTTTPRDFATLAKQFVPFQNPDYLVVEASSWGFGILFLVLYFVGKAQNRRIADKWLEEAEPVLRTQFSYTGSSVENG----------------VGLIEESRSNFKYFCTGRRFLTR-FVVDLELKSRHDLFSRVYRIIVPTSDYLTIDVGLHTEDVDPFILGISKKLGFTALSKIFPELIETAK----QVPVKEVPESMWVV--TDCTEIPKATLTHSVQASLNELEDFLEYIVITDMNK 258
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|695389806|ref|XP_009519538.1| (hypothetical protein PHYSODRAFT_349881 [Phytophthora sojae] >gi|348684435|gb|EGZ24250.1| hypothetical protein PHYSODRAFT_349881 [Phytophthora sojae]) HSP 1 Score: 90.8929 bits (224), Expect = 3.171e-17 Identity = 74/278 (26.62%), Postives = 126/278 (45.32%), Query Frame = 0
Query: 18 WGAIGIQCMTAAAHGITDDEVEDEF--------LTPDP----PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVP-LALPPRLARRLNEHKHFFDHIHISDQN 282
W +G+ + A A + +DEF P P PPR FAT + +P + E + FL+ + G+ +N RI +LE+ +L QF+Y G + G + +E+ + F+++ +GRR L R +A ++L+ DL+ + ++P D +T++ GL EDV P IL +S++L +L L P+LL H +P + + A + +P AL L +NE + F ++I I+D N
Sbjct: 2 WRKVGVLALLAMALAFVHAQEQDEFDVVETQERAAPTPVHALPPRDFATLAKQFIPFQNPDYFAIEAASWSFGILFLVLYFVGKAQNRRIADKWLEEAEPVLRTQFSYTGSSVQNG----------------MGLIEESRSNFKYFCTGRRFLTRFVA-DLELKSHHDLISRIYRIIVPTSDYLTIDVGLHGEDVDPFILGISKKLGFTALTKLFPELLEHAK------QVPVKEVPESMWVATDCTEIPKTALTHSLQASINELEDFLEYIVITDMN 256
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|566027430|gb|ETI50341.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569] >gi|566027431|gb|ETI50342.1| hypothetical protein, variant 2 [Phytophthora parasitica P1569] >gi|566027432|gb|ETI50343.1| hypothetical protein, variant 3 [Phytophthora parasitica P1569]) HSP 1 Score: 85.5001 bits (210), Expect = 1.683e-15 Identity = 63/237 (26.58%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 48 PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVP-LALPPRLARRLNEHKHFFDHIHISDQNS 283
P R F T + +P + + E C + F+L F G+ +N +I +LE+ +L QF+Y G E G + +E+ + F+++ +GRR L R +A ++L+ R DL+ L V+P D +T++ GL EDV P IL + ++L +L + P+L+ +P + + + + +P AL + LNE + F ++I I+D N
Sbjct: 2 PARDFTTLAKQFIPFQNPDYFVAEACSWGFGILFVLLFFVGKAQNRKIADKWLEEAEPVLRTQFSYTGSSVENG----------------MGLLEESRSNFKYFCTGRRFLTRFVA-DLELKSRHDLISRLYRIVVPTSDFLTIDVGLHGEDVDPFILGICKKLGFTALSKIFPELIETAK------QVPVKEVPESMWVSTDCTEIPKAALTHSIQASLNELEDFLEYIVITDMNK 215
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|567964716|gb|ETK90198.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567964717|gb|ETK90199.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567964718|gb|ETK90200.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|567993427|gb|ETL43606.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|567993428|gb|ETL43607.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|567993429|gb|ETL43608.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|568053080|gb|ETM49932.1| hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568053081|gb|ETM49933.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568053082|gb|ETM49934.1| hypothetical protein, variant 3 [Phytophthora parasitica] >gi|570331077|gb|ETO79025.1| hypothetical protein, variant 1 [Phytophthora parasitica P1976] >gi|570331078|gb|ETO79026.1| hypothetical protein, variant 2 [Phytophthora parasitica P1976] >gi|570331079|gb|ETO79027.1| hypothetical protein, variant 3 [Phytophthora parasitica P1976] >gi|570954851|gb|ETP20108.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1] >gi|570954852|gb|ETP20109.1| hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >gi|570954853|gb|ETP20110.1| hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >gi|570989910|gb|ETP48033.1| hypothetical protein, variant 1 [Phytophthora parasitica P10297] >gi|570989911|gb|ETP48034.1| hypothetical protein, variant 2 [Phytophthora parasitica P10297] >gi|570989912|gb|ETP48035.1| hypothetical protein, variant 3 [Phytophthora parasitica P10297]) HSP 1 Score: 85.5001 bits (210), Expect = 1.751e-15 Identity = 63/237 (26.58%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 48 PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVP-LALPPRLARRLNEHKHFFDHIHISDQNS 283
P R F T + +P + + E C + F+L F G+ +N +I +LE+ +L QF+Y G E G + +E+ + F+++ +GRR L R +A ++L+ R DL+ L V+P D +T++ GL EDV P IL + ++L +L + P+L+ +P + + + + +P AL + LNE + F ++I I+D N
Sbjct: 2 PARDFTTLAKQFIPFQNPDYFVAEACSWGFGILFVLLFFVGKAQNRKIADKWLEEAEPVLRTQFSYTGSSVENG----------------MGLLEESRSNFKYFCTGRRFLTRFVA-DLELKSRHDLISRLYRIVVPTSDFLTIDVGLHGEDVDPFILGICKKLGFTALSKIFPELIETAK------QVPVKEVPESMWVSTDCTEIPKAALTHSIQASLNELEDFLEYIVITDMNK 215
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|568022715|gb|ETL96779.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|568022716|gb|ETL96780.1| hypothetical protein, variant 2 [Phytophthora parasitica] >gi|568022717|gb|ETL96781.1| hypothetical protein, variant 3 [Phytophthora parasitica]) HSP 1 Score: 85.1149 bits (209), Expect = 2.239e-15 Identity = 63/237 (26.58%), Postives = 111/237 (46.84%), Query Frame = 0
Query: 48 PPRPFATFSWLGLPSRVSRISMYEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLLHHTSLLLLPVLLPDLDTAHFVVYADNAAPVP-LALPPRLARRLNEHKHFFDHIHISDQNS 283
P R F T + +P + + E C + F+L F G+ +N +I +LE+ +L QF+Y G E G + +E+ + F+++ +GRR L R +A ++L+ R DL+ L V+P D +T++ GL EDV P IL + ++L +L + P+L+ +P + + + + +P AL + LNE + F ++I I+D N
Sbjct: 2 PARDFTTLAKQFIPFQNPDYFVAEACSWGFGILFVLLFFVGKAQNRKIADKWLEEAEPVLRTQFSYTGSSVENG----------------MGLLEESRSNFKYFCTGRRFLTRFVA-DLELKSRHDLISRLYRIVVPTSDFLTIDVGLHGEDVGPFILGICKKLGFTALSKIFPELIETAK------QVPVKEVPESMWVSTDCTEIPKAALTHSIQASLNELEDFLEYIVITDMNK 215
BLAST of EWM26962.1 vs. NCBI_GenBank
Match: gi|1032148278|gb|OAO12542.1| (coiled-coil domain-containing protein [Blastocystis sp. ATCC 50177/Nand II]) HSP 1 Score: 82.8037 bits (203), Expect = 1.828e-14 Identity = 64/220 (29.09%), Postives = 104/220 (47.27%), Query Frame = 0
Query: 70 YEICMLQILLCFLLRFRWGRRENERIKALFLEQCASLLSEQFAYVGPGSEVGREGSQPAEGRPGKEEDLVAFKEANACFQFWASGRRHLPRGMAITVDLQPRQDLLHVLRARVLPGEDSVTLEAGLSPEDVPPIILALSRRLHHRSLHLLTPDLL---HHTSLLLLPVLLPDLDTAHFVVYADNAAPVPLALPPRLARRLNEHKHFFDHIHISDQNSTPV 286
+EI + +LL + + F GR++N RI +L Q SLL + F VG G + +E+ ++ + SGR++ RGM + L+ RQDL +L + P +D +T++ + PE + P I AL R+ ++S+H DL H +L P L + + V+ +N P L L P+L L E +HISD + P+
Sbjct: 42 WEIVGVVLLLVYGMYFIVGRKKNIRIVNNWLNQYRSLLEKNFTAVGISGNYG-----------------LFMRESFDQYRLFCSGRKNC-RGMLFDLKLKKRQDLFSLLLDFITPVDDIMTVDIPMEPETLKPFIFALCRKRDYKSVHSANYDLKDMGHQIALQYTPE-LSKVSGSWVVISDNNEVPSSL-LTPQLINILKEPNSLLRLVHISDHMTPPI 241 The following BLAST results are available for this feature:
BLAST of EWM26962.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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