EWM26963.1, cds3709 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26963.1 vs. NCBI_GenBank
Match: gi|585109123|gb|EWM26963.1| (hypothetical protein Naga_101509g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 566.229 bits (1458), Expect = 0.000e+0 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
Query: 1 MPIQLNRWGGVHNEEVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADMGMCPGVP 275
MPIQLNRWGGVHNEEVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADMGMCPGVP
Sbjct: 1 MPIQLNRWGGVHNEEVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADMGMCPGVP 275
BLAST of EWM26963.1 vs. NCBI_GenBank
Match: gi|585108060|gb|EWM26072.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 178.718 bits (452), Expect = 1.183e-49 Identity = 100/266 (37.59%), Postives = 155/266 (58.27%), Query Frame = 0
Query: 15 EVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKG----GFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLF------SIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADMGM 270
++ +++ AL+IL +V IP + + A VYAWI QY YT +DWQRCLV PN+ G D+T + +AA++A + VF+I+ F G+ D D+LPY+LF + +LG+ VYRE+ PIQP+P+ +SATL+TL K+I P MY+ PA + P+ C+ A+ N+ FL+ Q ++++L +F ++A Y I R +L L L+ + GY+ AKE VA T+ VL ES+L +F F K ++ +
Sbjct: 56 QIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPA-AAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWR----FQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDI 315
BLAST of EWM26963.1 vs. NCBI_GenBank
Match: gi|585108059|gb|EWM26071.1| (hypothetical protein Naga_100278g4 [Nannochloropsis gaditana]) HSP 1 Score: 178.333 bits (451), Expect = 1.094e-48 Identity = 100/266 (37.59%), Postives = 155/266 (58.27%), Query Frame = 0
Query: 15 EVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKG----GFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLF------SIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADMGM 270
++ +++ AL+IL +V IP + + A VYAWI QY YT +DWQRCLV PN+ G D+T + +AA++A + VF+I+ F G+ D D+LPY+LF + +LG+ VYRE+ PIQP+P+ +SATL+TL K+I P MY+ PA + P+ C+ A+ N+ FL+ Q ++++L +F ++A Y I R +L L L+ + GY+ AKE VA T+ VL ES+L +F F K ++ +
Sbjct: 56 QIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANVMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPA-AAKWAPASCSLAYALNKWFLIFQILVVVLMCSIFLVISTCAVANYRIGKRWR----FQLEANGYPLGLLVIAFVGYVTCFYAKETVAQLTLDVLNESKLNSIFAFSKGELDI 315
BLAST of EWM26963.1 vs. NCBI_GenBank
Match: gi|553182461|ref|XP_005853731.1| (hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526] >gi|553186167|ref|XP_005854371.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422294686|gb|EKU21986.1| hypothetical protein NGA_0163501 [Nannochloropsis gaditana CCMP526] >gi|422295328|gb|EKU22627.1| hypothetical protein NGA_0163502 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 152.525 bits (384), Expect = 3.593e-40 Identity = 76/183 (41.53%), Postives = 118/183 (64.48%), Query Frame = 0
Query: 15 EVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKG----GFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLL 193
++ +++ AL+IL +V IP + + A VYAWI QY YT +DWQRCLV PN+ G D+T + +AA++A + VF+I+ F G+ D D+LPY+LF + +LG+ VYRE+ PIQP+P+ +SATL+TL K+I P MY+ PA + P+ C+ A+ N+ FL+ Q ++++L
Sbjct: 56 QIQDRSLTALRILFVVGIPLTIINISFACVYAWIFANQYSYTKDDWQRCLVYPNQAVDPLGGSTADKTNYLMAAASYAGRVFVFIIVVFKMAYVGVKDTDILPYSLFANMMAILGIIVYREAEPIQPQPQQLSATLLTLVKYIQPNMYS-FPA-AAKWAPASCSLAYALNKWFLIFQILVVVL 236
BLAST of EWM26963.1 vs. NCBI_GenBank
Match: gi|585105799|gb|EWM24397.1| (hypothetical protein Naga_100283g1 [Nannochloropsis gaditana]) HSP 1 Score: 106.686 bits (265), Expect = 8.841e-25 Identity = 58/155 (37.42%), Postives = 88/155 (56.77%), Query Frame = 0
Query: 4 QLNRWGGVHNEEVDRKAIFALKILL-LVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRM 157
+L R + ++++ L+I+ L+ P + S I +YA I R+ Y EDW +CL PN G + D F SA+ FA +A + L+++ G+ GL D+D L ++ F GLLG+T+YRES P +P MS TL TL+K+IHPR+
Sbjct: 21 ELKRRLHRRTSKASQESLKLLRIIFPLLVAPLCITSFIFTCLYAHIYAREGSYGPEDWPKCLTVPNIGNLHL-DNNRFCTSASNFAGQAYLSLLVAAGGLQLGLRDNDYLLFSSFTCIVGLLGITIYRESYPYFLDPHFMSTTLFTLSKYIHPRI 174
BLAST of EWM26963.1 vs. NCBI_GenBank
Match: gi|585102066|gb|EWM21737.1| (hypothetical protein Naga_100270g4 [Nannochloropsis gaditana]) HSP 1 Score: 110.538 bits (275), Expect = 9.732e-24 Identity = 82/251 (32.67%), Postives = 123/251 (49.00%), Query Frame = 0
Query: 24 LKILLLVAIPTVMASTILATVYAWI--QGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSI-----AVYTIAFSPRD--YLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKK 265
L+ L V +P + ++I A +Y WI Y WQRC+V N Q F SA+ F +F+ L F GL D D+LPY+L V+ LLG VYR +P+ P ++ TL++L F+ P MYAD+P G C HA N +FL ++++L ++ A Y PR YL L R L LV + + Y++T+ AKE A++T+ +L + GY+F F++
Sbjct: 126 LRKLFYVVMPLSIVASIYACLYGWIFVNTPTYLQDPTSWQRCIVY-NTNNANATPQN-FAVSASAFGGMMFIFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGA-----CQHARRVNVSFLA--FVLVLFAANFCNLLLLLYATYRTRRVPRSSRYL---LVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQR 364
BLAST of EWM26963.1 vs. NCBI_GenBank
Match: gi|553190289|ref|XP_005855162.1| (hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526] >gi|422293903|gb|EKU21203.1| hypothetical protein NGA_0147800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 87.8113 bits (216), Expect = 2.571e-16 Identity = 61/180 (33.89%), Postives = 94/180 (52.22%), Query Frame = 0
Query: 93 VFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSI-----AVYTIAFSPRD--YLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKK 265
+F+ L F GL D D+LPY+L V+ LLG VYR +P+ P ++ TL++L F+ P MYAD+P G C HA N +FL ++++L ++ A Y PR YL L R L LV + + Y++T+ AKE A++T+ +L + GY+F F++
Sbjct: 3 IFMGLGFKAGYLGLQDMDLLPYSLTVTCYTLLGQLVYRPVNPVVPAITELTPTLISLASFLRPGMYADVPDAAGA-----CQHARRVNVSFLA--FVLVLFAANFCNLLLLLYATYRTRRVPRSSRYL---LVWHRPALCLVGLAIAAYIVTIAAKEDAALKTLFLLDKVGHGYLFPFQR 172 The following BLAST results are available for this feature:
BLAST of EWM26963.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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