EWM26972.1, cds3701 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|585109139|gb|EWM26972.1| (hypothetical protein Naga_100127g24 [Nannochloropsis gaditana]) HSP 1 Score: 1220.3 bits (3156), Expect = 0.000e+0 Identity = 604/604 (100.00%), Postives = 604/604 (100.00%), Query Frame = 0
Query: 1 MESSAKKRRCCTIPALARVGNPPQPPLTAPTKAANTSAPAPFMFSFYRESETGHQDSKAALFHTSGSATTNTAGPSSIFASRLVQERKASRISTRHALLRRTAKQDPHTATDPLALQSEERVRVLWEASSNSSNIKVRRLNGEVVRVTSTDLSPLARAPDAHFSRPTENSEEENRLVCHIDLLFDDVTPGAHGNKLSPTPPQIDTSLASLIYPLTPEYFLKEIWNQKALVIQAGAGRLKKMCRNLDPIGVLPSSNRRKRPRPLSAPASRPPSLPFSTLHLRVSRLLESAHRIVVWMKTRTRHKGGRGNRTSRRAEQETSPHGRRTAKKGKCGDEEGGRGWDDVIPGQRQTTEPRPPSRENRRTQASCPPRPSRGRGGGEGLALPSLPLPPRTTFNTWTRYLPLSRRPVTRQGTPSTSTRPGGRNGPIFGRSPETWGFSPATVWEGGREGGREEGREGGKGEGTWRSLPCAPPHRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEALTDEEGGEEEGEEVEVEEEEEEEEEEEECIL 604
MESSAKKRRCCTIPALARVGNPPQPPLTAPTKAANTSAPAPFMFSFYRESETGHQDSKAALFHTSGSATTNTAGPSSIFASRLVQERKASRISTRHALLRRTAKQDPHTATDPLALQSEERVRVLWEASSNSSNIKVRRLNGEVVRVTSTDLSPLARAPDAHFSRPTENSEEENRLVCHIDLLFDDVTPGAHGNKLSPTPPQIDTSLASLIYPLTPEYFLKEIWNQKALVIQAGAGRLKKMCRNLDPIGVLPSSNRRKRPRPLSAPASRPPSLPFSTLHLRVSRLLESAHRIVVWMKTRTRHKGGRGNRTSRRAEQETSPHGRRTAKKGKCGDEEGGRGWDDVIPGQRQTTEPRPPSRENRRTQASCPPRPSRGRGGGEGLALPSLPLPPRTTFNTWTRYLPLSRRPVTRQGTPSTSTRPGGRNGPIFGRSPETWGFSPATVWEGGREGGREEGREGGKGEGTWRSLPCAPPHRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEALTDEEGGEEEGEEVEVEEEEEEEEEEEECIL
Sbjct: 1 MESSAKKRRCCTIPALARVGNPPQPPLTAPTKAANTSAPAPFMFSFYRESETGHQDSKAALFHTSGSATTNTAGPSSIFASRLVQERKASRISTRHALLRRTAKQDPHTATDPLALQSEERVRVLWEASSNSSNIKVRRLNGEVVRVTSTDLSPLARAPDAHFSRPTENSEEENRLVCHIDLLFDDVTPGAHGNKLSPTPPQIDTSLASLIYPLTPEYFLKEIWNQKALVIQAGAGRLKKMCRNLDPIGVLPSSNRRKRPRPLSAPASRPPSLPFSTLHLRVSRLLESAHRIVVWMKTRTRHKGGRGNRTSRRAEQETSPHGRRTAKKGKCGDEEGGRGWDDVIPGQRQTTEPRPPSRENRRTQASCPPRPSRGRGGGEGLALPSLPLPPRTTFNTWTRYLPLSRRPVTRQGTPSTSTRPGGRNGPIFGRSPETWGFSPATVWEGGREGGREEGREGGKGEGTWRSLPCAPPHRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEALTDEEGGEEEGEEVEVEEEEEEEEEEEECIL 604
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|857977509|emb|CEO96545.1| (hypothetical protein PBRA_005154 [Plasmodiophora brassicae]) HSP 1 Score: 107.071 bits (266), Expect = 1.270e-20 Identity = 65/185 (35.14%), Postives = 93/185 (50.27%), Query Frame = 0
Query: 396 TWTRYLPLSRRPVTRQGTPSTSTRPGGRNGPIFGRSPETWGFSPATVWEGGREGGREEGR---EGGKGEGTWRSLPCAPPHRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEALTDE 577
W R R G+P + R R G +PE + F + ++ G + R +GG G G A H TP+HWD+QHNFTVQ+ G K W + +P++N HP SSN + A DT + CG+ + L+ P SS + + F LRPG+VLY+P G+WH V+ + DE
Sbjct: 261 VWMRSAVDGRMQYLDVGSPDVA-RACYRAGHSLYFNPE-YDFQKRFIRGICQDLGMDFTRAIQDGGIG-GDVEVFAVAGRHHTPWHWDAQHNFTVQLSGTKHWAIARGPQTDPMTNFHPRSSNSASLADDTIMLRRCGLVPDQLEPPG----DSSEAVSRFTLRPGSVLYMPAGFWHRVDVIDDE 438
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|1173943432|gb|OQR92285.1| (hypothetical protein ACHHYP_03858 [Achlya hypogyna]) HSP 1 Score: 91.2781 bits (225), Expect = 1.085e-15 Identity = 47/109 (43.12%), Postives = 65/109 (59.63%), Query Frame = 0
Query: 473 HRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSP--ASFVLRPGAVLYLPPGWWHAVEALTDEEG 579
H TP+H D+Q N T+Q+ G KRW+ V++PL+N H +S+N + D H C P LQ PP+ P +S VLRPG+VLY+P G+WH VEA+ +EG
Sbjct: 276 HSTPWHLDAQQNITIQLTGTKRWSFCKGPVDDPLTNLHLASTNTPSVQDDLLTHTMCQAPWSTLQ------PPTEDDPRISSVVLRPGSVLYVPAGYWHKVEAM--DEG 376
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|1173940285|gb|OQR89750.1| (hypothetical protein THRCLA_09598 [Thraustotheca clavata]) HSP 1 Score: 90.1225 bits (222), Expect = 2.744e-15 Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 0
Query: 456 EGGKGEGTWRSLPCAPPHRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSP--ASFVLRPGAVLYLPPGWWHAVEALTDEEGG 580
+GG G G H TP+H D+Q N T+Q+ G KRW+ V++P++N H +S+N + D H C LQ PPS P +S +LRPG+VLY+P G+WH VEA+ +EG
Sbjct: 262 DGGIG-GDIELFAVQGRHSTPWHLDAQQNITIQLTGTKRWSFCKGPVDDPMTNLHLASTNTTSVQDDLITHSMCNATTLNLQ------PPSDDDPRVSSVLLRPGSVLYVPAGYWHKVEAM--DEGS 379
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|669157706|ref|XP_008614415.1| (hypothetical protein SDRG_10212 [Saprolegnia diclina VS20] >gi|530733771|gb|EQC32013.1| hypothetical protein SDRG_10212 [Saprolegnia diclina VS20]) HSP 1 Score: 88.5817 bits (218), Expect = 9.726e-15 Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 0
Query: 456 EGGKGEGTWRSLPCAPPHRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSP--ASFVLRPGAVLYLPPGWWHAVEALTDEEGGEEEGEEVE 588
+GG G G H TP+H D+Q N T+Q+ G KRW+ V++P++N H +S+N + D H G P+ PP+ P AS VLRPG+VLY+P G+WH VEA+ +EG ++
Sbjct: 263 DGGMG-GDIELFAVQGRHSTPWHLDAQQNITIQLTGTKRWSFVKGPVHDPMTNLHLASTNTPSVQDDLITHCMSG------ATPAMLTPPADDDPAIASVVLRPGSVLYVPAGYWHKVEAM--DEGSLSMNFSID 388
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|813206304|ref|XP_012210129.1| (hypothetical protein SPRG_15682 [Saprolegnia parasitica CBS 223.65] >gi|641524598|gb|KDO19159.1| hypothetical protein SPRG_15682 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 88.1965 bits (217), Expect = 1.059e-14 Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 0
Query: 456 EGGKGEGTWRSLPCAPPHRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSP--ASFVLRPGAVLYLPPGWWHAVEALTDEEGGEEEGEEVE 588
+GG G G H TP+H D+Q N T+Q+ G KRW+ V++P++N H +S+N + D H G P+ PP+ P AS VLRPG+VLY+P G+WH VEA+ +EG ++
Sbjct: 264 DGGMG-GDIELFAVQGRHSTPWHLDAQQNITIQLTGTKRWSFVKGPVHDPMTNLHLASTNTPSVQDDLLTHCMSG------ATPAMLTPPADDDPAVASVVLRPGSVLYVPAGYWHKVEAM--DEGSLSMNFSID 389
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|698814284|ref|XP_009840171.1| (hypothetical protein H257_14120 [Aphanomyces astaci] >gi|574104932|gb|ETV70459.1| hypothetical protein H257_14120 [Aphanomyces astaci]) HSP 1 Score: 85.8853 bits (211), Expect = 7.263e-14 Identity = 45/107 (42.06%), Postives = 62/107 (57.94%), Query Frame = 0
Query: 473 HRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEALTDEEG 579
H TP+H+D+QHNFTVQ+ G K W+ + +P+SN H SSSN + DT H G + P +SS + LRPG+VLYLP G+WH+V + +EG
Sbjct: 285 HHTPWHFDAQHNFTVQLTGTKEWSYAKGPLTDPMSNLHLSSSNTASVLEDTLAHAMAG---------ATDLTPPTSSFETVTLRPGSVLYLPAGYWHSVTSF--DEG 380
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|698814286|ref|XP_009840172.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574104933|gb|ETV70460.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 84.7297 bits (208), Expect = 9.936e-14 Identity = 45/107 (42.06%), Postives = 61/107 (57.01%), Query Frame = 0
Query: 473 HRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEALTDEEG 579
H TP+H+D+QHNFTVQ+ G K W+ + +P+SN H SSSN + DT H G P +SS + LRPG+VLYLP G+WH+V + +EG
Sbjct: 285 HHTPWHFDAQHNFTVQLTGTKEWSYAKGPLTDPMSNLHLSSSNTASVLEDTLAHAMAGAT---------DLTPPTSSFETVTLRPGSVLYLPAGYWHSVTSF--DEG 380
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|929771620|ref|XP_014160743.1| (hypothetical protein SARC_01034 [Sphaeroforma arctica JP610] >gi|906958717|gb|KNC86841.1| hypothetical protein SARC_01034 [Sphaeroforma arctica JP610]) HSP 1 Score: 83.5741 bits (205), Expect = 4.557e-13 Identity = 44/108 (40.74%), Postives = 62/108 (57.41%), Query Frame = 0
Query: 473 HRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEALTDEEGG 580
H TP+H+D+Q NFT+Q+RG KRW+V S++ + ++N HP S+N A D H G AP +FVLRPG++LY P G WH V+ +E+GG
Sbjct: 359 HDTPWHFDAQENFTIQLRGTKRWSVCKSDLKDIVTNLHPDSTNIEAVYNDYKTH--SGYTGTRPTAPK----EGIDDIYTFVLRPGSILYAPAGMWHRVQC-ENEDGG 459
BLAST of EWM26972.1 vs. NCBI_GenBank
Match: gi|673051263|ref|XP_008879592.1| (hypothetical protein H310_13744 [Aphanomyces invadans] >gi|574464621|gb|ETV91666.1| hypothetical protein H310_13744 [Aphanomyces invadans]) HSP 1 Score: 82.0333 bits (201), Expect = 1.023e-12 Identity = 40/102 (39.22%), Postives = 57/102 (55.88%), Query Frame = 0
Query: 473 HRTPFHWDSQHNFTVQIRGRKRWTVQNSNVNEPLSNHHPSSSNRRARAGDTALHMACGMPVEALQAPSFHGPPSSSSPASFVLRPGAVLYLPPGWWHAVEAL 574
H TP+H+D+QHNFTVQ+ G K W+ + +P+SN H SSSN + D H G + P ++ + LRPG+VLYLP G+WH+V +
Sbjct: 283 HHTPWHFDAQHNFTVQLVGTKEWSYAKGPLTDPMSNLHLSSSNTASVVDDMLAHAMSG---------ATDLKPPTTEIETVTLRPGSVLYLPAGYWHSVTSF 375 The following BLAST results are available for this feature:
BLAST of EWM26972.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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