EWM26988.1, cds3695 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|585109155|gb|EWM26988.1| (brain protein 44-like protein [Nannochloropsis gaditana]) HSP 1 Score: 217.624 bits (553), Expect = 7.748e-72 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKKS 103 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKKS Sbjct: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKKS 103
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|301110196|ref|XP_002904178.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262096304|gb|EEY54356.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 162.155 bits (409), Expect = 8.304e-50 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKK 102 M++RL FINSPTGPKTTHFWGPVANWGFVLAAM D +KP + IS MT LS+YSL+FMRFAWMV+PRNYLLLACHASNE AQLYQL R + Y +K + Sbjct: 3 MASRLRYFINSPTGPKTTHFWGPVANWGFVLAAMADMQKPADVISINMTSALSIYSLIFMRFAWMVKPRNYLLLACHASNETAQLYQLQRGVRYQASKKAAE 104
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|970655242|gb|KUF93431.1| (Mitochondrial pyruvate carrier 1 [Phytophthora nicotianae] >gi|970660779|gb|KUF98302.1| hypothetical protein AM588_10009697 [Phytophthora nicotianae]) HSP 1 Score: 162.155 bits (409), Expect = 8.967e-50 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKK 102 M++RL FINSPTGPKTTHFWGPVANWGFV+AAM D RKP + IS MT LS+YSL+FMRFAWMV+PRNYLLLACHASNE AQLYQL R I + +K + Sbjct: 3 MASRLRYFINSPTGPKTTHFWGPVANWGFVVAAMADMRKPADVISINMTSALSIYSLIFMRFAWMVKPRNYLLLACHASNEAAQLYQLQRGIRFQASKKAAE 104
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|695456775|ref|XP_009537035.1| (hypothetical protein PHYSODRAFT_288894 [Phytophthora sojae] >gi|348667644|gb|EGZ07469.1| hypothetical protein PHYSODRAFT_288894 [Phytophthora sojae]) HSP 1 Score: 161.384 bits (407), Expect = 1.586e-49 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKK 102 M++RL FINSPTGPKTTHFWGPVANWGFVLAAM D +KP + IS MT LS+YSL+FMRFAWMV+PRNYLLLACHASNE AQLYQL R + Y +K + Sbjct: 3 MASRLRYFINSPTGPKTTHFWGPVANWGFVLAAMADMQKPADVISINMTSALSIYSLIFMRFAWMVKPRNYLLLACHASNETAQLYQLQRGLRYQASKKSAE 104
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|570994012|gb|ETP51226.1| (hypothetical protein F442_03602 [Phytophthora parasitica P10297]) HSP 1 Score: 162.925 bits (411), Expect = 1.605e-49 Identity = 73/103 (70.87%), Postives = 84/103 (81.55%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKKS 103 M++RL FINSPTGPKTTHFWGPVANWGFV+AAM D RKP + IS MT LS+YSL+FMRFAWMV+PRNYLLLACHASNE AQLYQL R I + +K ++ Sbjct: 45 MASRLRYFINSPTGPKTTHFWGPVANWGFVVAAMADMRKPADVISINMTSALSIYSLIFMRFAWMVKPRNYLLLACHASNEAAQLYQLQRGIRFQASKKAAEN 147
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|675183885|ref|XP_008900827.1| (hypothetical protein PPTG_08478 [Phytophthora parasitica INRA-310] >gi|566030515|gb|ETI53426.1| hypothetical protein F443_03622 [Phytophthora parasitica P1569] >gi|567968117|gb|ETK93267.1| hypothetical protein L915_03516 [Phytophthora parasitica] >gi|567996567|gb|ETL46674.1| hypothetical protein L916_03467 [Phytophthora parasitica] >gi|568025817|gb|ETL99819.1| hypothetical protein L917_03387 [Phytophthora parasitica] >gi|568056265|gb|ETM52977.1| hypothetical protein L914_03491 [Phytophthora parasitica] >gi|568099034|gb|ETN13752.1| hypothetical protein PPTG_08478 [Phytophthora parasitica INRA-310] >gi|570334203|gb|ETO82151.1| hypothetical protein F444_03691 [Phytophthora parasitica P1976] >gi|570958235|gb|ETP23214.1| hypothetical protein F441_03617 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 162.54 bits (410), Expect = 1.714e-49 Identity = 73/102 (71.57%), Postives = 83/102 (81.37%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKK 102 M++RL FINSPTGPKTTHFWGPVANWGFV+AAM D RKP + IS MT LS+YSL+FMRFAWMV+PRNYLLLACHASNE AQLYQL R I + +K + Sbjct: 45 MASRLRYFINSPTGPKTTHFWGPVANWGFVVAAMADMRKPADVISINMTSALSIYSLIFMRFAWMVKPRNYLLLACHASNEAAQLYQLQRGIRFQASKKAAE 146
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|953489134|emb|CEG47408.1| (brain protein 44-like protein [Plasmopara halstedii]) HSP 1 Score: 160.614 bits (405), Expect = 3.248e-49 Identity = 73/103 (70.87%), Postives = 83/103 (80.58%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKKS 103 M++RL FINSPTGPKTTHFWGPVANWGFVLAAM D +KP + IS MT LS+YSL+FMRFAWMV+PRNYLLLACHASNE AQLYQL R + + K K+ Sbjct: 1 MASRLRYFINSPTGPKTTHFWGPVANWGFVLAAMADMQKPADVISINMTSALSIYSLIFMRFAWMVKPRNYLLLACHASNETAQLYQLQRGLRFQASTKEAKT 103
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|1214710970|gb|OWZ22014.1| (hypothetical protein PHMEG_0003330 [Phytophthora megakarya]) HSP 1 Score: 160.229 bits (404), Expect = 4.304e-49 Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKK 102 M++RL FINSPTGPKTTHFWGPVANWGFVLAAM D +KP + IS MT LS+YSL+FMRFAWMV+PRNYLLLACHASNE AQLYQL R + + +K + Sbjct: 3 MASRLRYFINSPTGPKTTHFWGPVANWGFVLAAMADMQKPADVISINMTSALSIYSLIFMRFAWMVKPRNYLLLACHASNETAQLYQLQRGLRFQASKKAAE 104
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|159483257|ref|XP_001699677.1| (hypothetical protein CHLREDRAFT_182136 [Chlamydomonas reinhardtii] >gi|158281619|gb|EDP07373.1| predicted protein [Chlamydomonas reinhardtii]) HSP 1 Score: 157.532 bits (397), Expect = 5.825e-48 Identity = 72/103 (69.90%), Postives = 82/103 (79.61%), Query Frame = 0 Query: 1 MSARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKKS 103 M++R +Q++NSPTGPKTTHFWGPVANWGFVLA + D RK PE IS MTGV+ VYS+LFMRFAW VQPRNYLLLACHASNE QLYQLSR S+ K + Sbjct: 1 MASRFMQWVNSPTGPKTTHFWGPVANWGFVLAGLADMRKDPEYISPNMTGVMCVYSVLFMRFAWEVQPRNYLLLACHASNETVQLYQLSRWYSWSNSAKAADA 103
BLAST of EWM26988.1 vs. NCBI_GenBank
Match: gi|635370844|emb|CCI41107.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 154.066 bits (388), Expect = 1.102e-46 Identity = 69/102 (67.65%), Postives = 81/102 (79.41%), Query Frame = 0 Query: 2 SARLVQFINSPTGPKTTHFWGPVANWGFVLAAMIDSRKPPETISAKMTGVLSVYSLLFMRFAWMVQPRNYLLLACHASNEVAQLYQLSRRISYDMEQKGKKS 103 A +F+N PTGP+TTHFWGPVANWGFVLAA++D +KPPE IS MT +SVYS+LFMRFAWMVQPRNYLLLACH SNE AQLYQL R + + K ++S Sbjct: 3 GAHFRRFLNHPTGPRTTHFWGPVANWGFVLAAIMDMKKPPEMISVNMTMAMSVYSILFMRFAWMVQPRNYLLLACHGSNETAQLYQLQRALRHRFGIKSEQS 104 The following BLAST results are available for this feature:
BLAST of EWM26988.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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