EWM26984.1, cds3693 (CDS) Nannochloropsis gaditana

Overview
NameEWM26984.1
Unique Namecds3693
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1012985..1013065 -
Alignment locationCM002461.1:1012148..1012816 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26984.1
Productemopamil binding protein
Orig transcript idgnl|cribi|Naga_100127g13.6216.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1012985..1013065 -
CM002461.1supercontigCM002461.1:1012148..1012816 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0016125sterol metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0047750cholestenol delta-isomerase activity
Vocabulary: INTERPRO
TermDefinition
IPR007905EBP
Homology
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|585109151|gb|EWM26984.1| (emopamil binding protein [Nannochloropsis gaditana])

HSP 1 Score: 495.738 bits (1275), Expect = 3.159e-177
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
Query:    1 MEQGRREGSVKREPKWQHNVPLTYIDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGACSLAKVGASGGKEGGSKREERGQAPGIPSVHWFWVLAMAMVVYVILVPLILVATAAPPPVEASGRVVEL 249
            MEQGRREGSVKREPKWQHNVPLTYIDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGACSLAKVGASGGKEGGSKREERGQAPGIPSVHWFWVLAMAMVVYVILVPLILVATAAPPPVEASGRVVEL
Sbjct:    1 MEQGRREGSVKREPKWQHNVPLTYIDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGACSLAKVGASGGKEGGSKREERGQAPGIPSVHWFWVLAMAMVVYVILVPLILVATAAPPPVEASGRVVEL 249          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|470506950|ref|XP_004367559.1| (Emopamil binding protein [Acanthamoeba castellanii str. Neff] >gi|440801283|gb|ELR22303.1| Emopamil binding protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 155.221 bits (391), Expect = 4.460e-43
Identity = 77/181 (42.54%), Postives = 115/181 (63.54%), Query Frame = 0
Query:   22 LTYIDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGACSLAKVGASGGKEGGSKREERG 202
            L++ D +A  W+V D + H+ +E  ++ ++L  TA  S   + FLWREY +AD RWA  DP I+++EL+TV L    C+L A AI +R+P+RH +Q+ + ++ELYGGWMTF P+ L G P+L   +P  L V+L F NG+WV++PA+L W+S   +  A S    GA+  K  G K+   G
Sbjct:   41 LSFADNLALLWYVYDMLVHVIMEGSFLYVSLTGTAETSDFPLAFLWREYGKADRRWAISDPTIVSLELLTVVLCSILCILLAIAIVNRKPWRHFVQVFLCVMELYGGWMTFCPEWLTGNPNLDGSNPVYLWVYLWFANGIWVVIPAILLWQSFVAMNQAFSTTG-GAAHVKTSGKKKTVSG 220          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|923133155|ref|XP_013760043.1| (hypothetical protein AMSG_03193 [Thecamonas trahens ATCC 50062] >gi|906553522|gb|KNC46765.1| hypothetical protein AMSG_03193 [Thecamonas trahens ATCC 50062])

HSP 1 Score: 149.443 bits (376), Expect = 3.703e-41
Identity = 98/223 (43.95%), Postives = 127/223 (56.95%), Query Frame = 0
Query:   17 QHNVPLTYIDRVAFSWFVLDAITHLSIELGYVLLAL--GPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGACSLAKVGASGGKEGGSKREERGQAPGIPSVHWFWVLAMAMVVYVILVPLILVATAAP 237
            Q    L + D VA  WF LDA+THL +E  Y+  AL     A +S S+   +W EY +AD+RWAG DP + A+EL+TVF+ GP      WAI+ RR  RHV Q+ IS++ELYGG MTF P+ +AG+PSL    P L  V+L FMNG+WV VP VL  ES   L+ AC    V                 AP   S  W   +A+ + +Y + VPLIL AT +P
Sbjct:    7 QRAARLPWADVVALIWFALDAVTHLVLEASYLYYALLVPGGAASSDSWAASIWVEYGKADTRWAGNDPGVAALELLTVFIAGPLAAWLCWAIWTRRADRHVWQVVISVMELYGGGMTFIPEWIAGSPSLRTHHPVLTWVYLAFMNGVWVYVPLVLLAESIPILIAACDATSVPV---------------APAYLSSAWHTSVAVILAIYAVAVPLIL-ATMSP 213          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|291227029|ref|XP_002733492.1| (PREDICTED: emopamil-binding protein-like [Saccoglossus kowalevskii])

HSP 1 Score: 146.362 bits (368), Expect = 4.273e-40
Identity = 67/149 (44.97%), Postives = 98/149 (65.77%), Query Frame = 0
Query:   25 IDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWES 173
            +++    WF+ DAI H ++E  +V L+L  +   S S++  LW+EY +AD RW   DP I+++EL+TV + GP  LL  +AI  R  YRH +Q+ I + ELYGG+MTF+PD L G+P+L   +P  L  +LIF NGLWV+ PA L ++S
Sbjct:   39 VEKWVIVWFIYDAIVHFTLEAPFVYLSLVGSVDTSDSYIAMLWKEYGKADKRWLYSDPTIVSLELLTVGITGPLALLCVYAIVKRTYYRHFIQITICVCELYGGFMTFSPDWLIGSPNLDTTNPLYLWCYLIFFNGLWVVFPAALLYQS 187          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|196003926|ref|XP_002111830.1| (hypothetical protein TRIADDRAFT_24579 [Trichoplax adhaerens] >gi|190585729|gb|EDV25797.1| hypothetical protein TRIADDRAFT_24579 [Trichoplax adhaerens])

HSP 1 Score: 144.821 bits (364), Expect = 2.092e-39
Identity = 63/152 (41.45%), Postives = 95/152 (62.50%), Query Frame = 0
Query:   26 DRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATL 177
            D+    W   DAITH ++E  Y+ ++   T   S  +M  LW+EY +ADSRW   D  +I++E++TV   GP C+   +AI + + YRH LQ+ + + ELYGGWMTFAP+ + G+PSL   +   L ++L+F NGLWV++P  + W+S   L
Sbjct:   42 DKWIIIWLFYDAITHFTLEASYLSMSFHGTVAKSEGYMAELWKEYGKADSRWIHFDTGLISLEILTVMFCGPVCIWLIYAIVNNKHYRHFLQITLCVCELYGGWMTFAPEWITGSPSLDTSNALYLWIYLVFFNGLWVVIPLAMLWQSWEAL 193          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|676425897|ref|XP_009044450.1| (hypothetical protein LOTGIDRAFT_211745 [Lottia gigantea] >gi|556116289|gb|ESP04941.1| hypothetical protein LOTGIDRAFT_211745 [Lottia gigantea])

HSP 1 Score: 144.821 bits (364), Expect = 4.404e-39
Identity = 64/152 (42.11%), Postives = 98/152 (64.47%), Query Frame = 0
Query:   22 LTYIDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWES 173
            L  +++ A SW V D +THL++EL ++  +L  T  +S  F   LW+EY +AD RW   DP ++++E++TV + G  CL+  +AI   R YRH +Q+ + + ELYGGWMTF P+ L G+P+L   +   L V+LIF NG+WV++P  L  +S
Sbjct:   34 LAQVEKWALSWLVFDGMTHLTLELAFLYFSLTGTVESSTHFSALLWKEYGKADKRWLISDPTVVSLEILTVVVDGLLCLVLIYAIVKDRSYRHFVQVVLCVCELYGGWMTFCPEWLTGSPNLVTDNVLYLWVYLIFFNGIWVVIPLALLCQS 185          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|198281997|ref|NP_001005397.1| (emopamil-binding protein-like [Danio rerio] >gi|115528146|gb|AAI24738.1| Emopamil binding protein-like [Danio rerio] >gi|197247173|gb|AAI64305.1| Ebpl protein [Danio rerio])

HSP 1 Score: 142.895 bits (359), Expect = 1.119e-38
Identity = 70/163 (42.94%), Postives = 100/163 (61.35%), Query Frame = 0
Query:   15 KWQHNVPLTYIDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATL 177
            KW H    + +DR    W   DAI H ++E  +V ++L     +S + +  LW+EY +AD RW   DP I+++EL+TV L G   LL  +AI   + YRH +Q+ + + ELYGGWMTF PD L G+P+L   +   L V+L+F NG+WVLVPA+L W+S   L
Sbjct:   38 KWGHKC--SAVDRWVLVWLFYDAIVHFTLEGPFVYMSLVGNVASSDNLLAELWKEYGKADERWLYSDPTIVSLELLTVVLDGSLALLLVYAIIKDKHYRHFVQITLCVCELYGGWMTFCPDWLMGSPNLNTSNWLYLWVYLVFFNGIWVLVPALLLWQSWKDL 198          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|585638694|ref|XP_006879569.1| (PREDICTED: emopamil-binding protein-like [Elephantulus edwardii])

HSP 1 Score: 142.51 bits (358), Expect = 1.520e-38
Identity = 69/148 (46.62%), Postives = 95/148 (64.19%), Query Frame = 0
Query:   26 DRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWES 173
            DR A +W   DA+ H  +E  +V LAL      S   +  LW+EY +AD+RW   DPNI+A+EL+TVFL G   LL  +AI   + YRH LQ+ + + ELYGGWMTF+PD L G+P+L  ++     V+L+F NG+WVLVP +L  +S
Sbjct:   40 DRWALAWLCYDALVHFVLEGAFVYLALVGNVADSEGVLASLWKEYGKADARWLYFDPNIVAVELITVFLDGSLALLLIYAIVKEKYYRHFLQVTLCVCELYGGWMTFSPDWLVGSPNLNTKNWLYFWVYLVFFNGVWVLVPTLLLCQS 187          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|831325989|ref|XP_012696095.1| (PREDICTED: emopamil-binding protein-like [Clupea harengus])

HSP 1 Score: 140.584 bits (353), Expect = 8.489e-38
Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 0
Query:   26 DRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGA 180
            DR    W   DAI H+++E  +V ++L  T   S +    LW+EY +ADSRW   DP I+++EL+TV L G   LL  +AI   + YRH LQ+ + + ELYGGWMTF PD L G+PSL   +   L V+L+F NG+WV+VP +L W+S   L  A
Sbjct:   46 DRWVLVWLFYDAIVHITLEGPFVYMSLVGTVATSDNIFAELWKEYGKADSRWLHSDPTIVSLELLTVVLDGFLALLLIFAIVKDKHYRHFLQITLCVCELYGGWMTFCPDWLTGSPSLNTSNWLYLWVYLVFFNGVWVVVPGLLLWQSWHMLKSA 200          
BLAST of EWM26984.1 vs. NCBI_GenBank
Match: gi|754348212|ref|XP_004347519.2| (ebpl protein [Capsaspora owczarzaki ATCC 30864] >gi|765553452|gb|KJE94073.1| ebpl protein [Capsaspora owczarzaki ATCC 30864])

HSP 1 Score: 140.198 bits (352), Expect = 1.261e-37
Identity = 66/177 (37.29%), Postives = 102/177 (57.63%), Query Frame = 0
Query:   25 IDRVAFSWFVLDAITHLSIELGYVLLALGPTARASPSFMGFLWREYARADSRWAGRDPNIIAIELVTVFLLGPACLLAAWAIYHRRPYRHVLQLGISLLELYGGWMTFAPDVLAGAPSLALQDPFLLSVHLIFMNGLWVLVPAVLAWESGATLVGACSLAKVGASGGKEGGSKREER 201
            ++   F W   DA+ H  +E  +V ++L  T +   +    LW+EY++AD+RW   DP ++++E++TVF     C++  WA+ + +PYRH LQ+ + + ELYGGWMTF P+ L G+P+L   +P  L V+L F N +WV+VP  L W+S   L  A     V A  G    S R  +
Sbjct:   36 VEFYVFLWLAYDALIHTILEGSFVFMSLRSTVKEHDNAFASLWKEYSKADARWLVSDPTVVSLEILTVFFDTFLCVVIMWAMVYNKPYRHYLQVVLCVCELYGGWMTFCPEWLVGSPALNTSNPLHLWVYLFFFNMVWVVVPLALMWQSWNFLNNA-----VLAGTGNPSQSTRSRK 207          
The following BLAST results are available for this feature:
BLAST of EWM26984.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109151|gb|EWM26984.1|3.159e-177100.00emopamil binding protein [Nannochloropsis gaditana... [more]
gi|470506950|ref|XP_004367559.1|4.460e-4342.54Emopamil binding protein [Acanthamoeba castellanii... [more]
gi|923133155|ref|XP_013760043.1|3.703e-4143.95hypothetical protein AMSG_03193 [Thecamonas trahen... [more]
gi|291227029|ref|XP_002733492.1|4.273e-4044.97PREDICTED: emopamil-binding protein-like [Saccoglo... [more]
gi|196003926|ref|XP_002111830.1|2.092e-3941.45hypothetical protein TRIADDRAFT_24579 [Trichoplax ... [more]
gi|676425897|ref|XP_009044450.1|4.404e-3942.11hypothetical protein LOTGIDRAFT_211745 [Lottia gig... [more]
gi|198281997|ref|NP_001005397.1|1.119e-3842.94emopamil-binding protein-like [Danio rerio] >gi|11... [more]
gi|585638694|ref|XP_006879569.1|1.520e-3846.62PREDICTED: emopamil-binding protein-like [Elephant... [more]
gi|831325989|ref|XP_012696095.1|8.489e-3845.16PREDICTED: emopamil-binding protein-like [Clupea h... [more]
gi|754348212|ref|XP_004347519.2|1.261e-3737.29ebpl protein [Capsaspora owczarzaki ATCC 30864] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3702rna3702Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications