EWM26981.1, cds3689 (CDS) Nannochloropsis gaditana

Overview
NameEWM26981.1
Unique Namecds3689
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:1005027..1005128 -
Alignment locationCM002461.1:1004415..1004762 -
Alignment locationCM002461.1:1003274..1004260 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26981.1
Product26s proteasome non-atpase regulatory subunit 11
Orig transcript idgnl|cribi|Naga_100127g9.6213.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:1005027..1005128 -
CM002461.1supercontigCM002461.1:1004415..1004762 -
CM002461.1supercontigCM002461.1:1003274..1004260 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR011991WHTH_DNA-bd_dom
IPR013143PAM
IPR000717PCI_dom
Homology
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|585109148|gb|EWM26981.1| (26s proteasome non-atpase regulatory subunit 11 [Nannochloropsis gaditana])

HSP 1 Score: 977.622 bits (2526), Expect = 0.000e+0
Identity = 478/478 (100.00%), Postives = 478/478 (100.00%), Query Frame = 0
Query:    1 MTAPASMEVSGGVEESKTATEPKPSAPTNVNAAMEEEESLPDPLKEALEAAEELAQSHPSKAITAFHAIVNTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIPDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSAVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKMVHAGHAREGGGGGGEGAVSSA 478
            MTAPASMEVSGGVEESKTATEPKPSAPTNVNAAMEEEESLPDPLKEALEAAEELAQSHPSKAITAFHAIVNTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIPDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSAVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKMVHAGHAREGGGGGGEGAVSSA
Sbjct:    1 MTAPASMEVSGGVEESKTATEPKPSAPTNVNAAMEEEESLPDPLKEALEAAEELAQSHPSKAITAFHAIVNTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIPDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSAVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKMVHAGHAREGGGGGGEGAVSSA 478          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|298709379|emb|CBJ31312.1| (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 496.893 bits (1278), Expect = 1.085e-170
Identity = 242/376 (64.36%), Postives = 300/376 (79.79%), Query Frame = 0
Query:   82 RLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIPDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSAV-TSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQK 456
            ++KEEAIY LAK +AD+ +F +V+ LLKT+  FF  IPKA+TAKIVRTIIDIV+K+PDS++LQ  LCR+VVAWC  +KR FLRQRI+SR A LL+ +  Y  A+AL++KLLRELK+ DDKQLLVETHLVEAR+ +ALRN PKAKAALTAARTAGNSIY+ P MQAELD MSG LHCEEGDYKT+ SYFLE++EAFDS  D RA + L+YM+LC VLQG+  +V A+   K G+K+ G  ++A+  +A +AK RSLE FDAA   +G  L +DLL+ HH+ I+Y+QLLESNLLKII+PFSCVE++HVA LI LP   VE KLSQMILD KL G LDQGKGQL++YE +  DK F+ GLE++ N+G VV+SLF R QK
Sbjct:   69 KVKEEAIYGLAKAYADSRRFSDVVDLLKTASPFFGTIPKARTAKIVRTIIDIVSKVPDSLELQDALCRQVVAWCKTEKRNFLRQRIQSRQAGLLFEQGKYQNAVALLNKLLRELKRMDDKQLLVETHLVEARVHNALRNTPKAKAALTAARTAGNSIYISPIMQAELDDMSGTLHCEEGDYKTSFSYFLESYEAFDSQEDSRALRSLKYMLLCKVLQGSASEVGAILAGKWGVKHTGAELDAMSEVAKSAKNRSLEEFDAAVSVHGKTLEKDLLIKHHLGILYDQLLESNLLKIIQPFSCVELDHVAELIKLPVDKVELKLSQMILDKKLLGILDQGKGQLVIYEEAVGDKVFTDGLEVMSNMGAVVNSLFSRVQK 444          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|1173941806|gb|OQR90901.1| (26S proteasome non-ATPase regulatory subunit 11-like, partial [Thraustotheca clavata])

HSP 1 Score: 442.195 bits (1136), Expect = 1.155e-149
Identity = 224/413 (54.24%), Postives = 295/413 (71.43%), Query Frame = 0
Query:   53 ELAQSHPSKAITAFHAIV--NTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIP-----DSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSA-VTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            E  ++ P ++I AF  I+  +  D + +A  R+KE +IY+L +L+    + +E+  LL++   FF+ IPKAKT KIVRTIID+V+K+       S+  Q DLC + +AWC  +K TFLRQRI++RLA++L+ +A Y  AL LI++LLRE+KK DDKQLLVE HLVEA++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKTA+SYF EAFEA  +L    A  CL+YM+L  +  G   DV   V  K  +K+AG  + A  AIA A  +RS+E F AA   Y   L QD L+ HH+H++YE LLESNL+KII+P+SCVEI HVATLI LP   VE KLSQMILD K +G LDQG+GQL+VYE +T DKT++ GL ++ N+G +VD+LFRRA K+
Sbjct:    1 EEGRASPERSIAAFQRILAYHGDDEDLEAVHRVKEHSIYKLGQLYTRHGREKELATLLQSVRPFFSTIPKAKTGKIVRTIIDMVSKVEALEHDKSLQFQADLCIDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQTALDLITELLREIKKLDDKQLLVEIHLVEAKLYHALRNVPKAKAALTAARSIANSIYIVPRMQANIDHMSGILHAEERDYKTAYSYFFEAFEALSNLDKTEALACLKYMLLSKIANGQSGDVPVIVNGKSAIKFAGVDVEAFKAIAKAHDQRSIELFQAATTQYSAQLIQDPLVKHHLHLLYENLLESNLIKIIQPYSCVEISHVATLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNIVDTLFRRADKL 413          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|1173951176|gb|OQR99089.1| (hypothetical protein ACHHYP_07377 [Achlya hypogyna])

HSP 1 Score: 441.425 bits (1134), Expect = 6.879e-149
Identity = 230/425 (54.12%), Postives = 300/425 (70.59%), Query Frame = 0
Query:   44 LKEALEAAEEL---AQSHPSKAITAFHAIV--NTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKI-----PDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSA-VTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            L+E  +AAEE     ++ P ++I AF  I+  N  D + +A  R+KE AIY+L +L+      +E+  LL++   FF  IPKAKT KIVRTIID+V+K+       S+  Q DLC + +AWC  +K TFLRQRI++RLA++L+ +A Y  AL LI++LLRE+KK DDKQLLVE HLVE+++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKTA SYF EAFEA  S+    A  CL+YM+L  V  G   DV   V  K+ +K++G  + AL AIA A ++RSLE F AA   Y   L QD L+ HH+ ++YE LLESNL+KII+P+SCVEI HVA+LI LP   VE KLSQMILD K +G LDQG+GQL+VYE +T DKT++ GL ++ N+G VV +LFRRA K+
Sbjct:   19 LQEDFDAAEEEMEEGRASPERSIAAFQRILAYNGDDADLEAVHRVKEHAIYKLGQLYTRHGLEKELATLLQSVRPFFTTIPKAKTGKIVRTIIDMVSKVETLDRQKSLQFQADLCIDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQAALDLITELLREIKKLDDKQLLVEIHLVESKLYHALRNVPKAKAALTAARSIANSIYIVPKMQANIDHMSGILHAEERDYKTAFSYFFEAFEALASIDKTEALACLKYMLLSKVANGQSADVPVIVNGKNAIKFSGIDVEALKAIAKAHEKRSLELFQAATAQYSAQLVQDPLIKHHLGLLYENLLESNLIKIIQPYSCVEISHVASLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNVVGTLFRRADKL 443          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|669148068|ref|XP_008609596.1| (26S proteasome regulatory subunit N6 [Saprolegnia diclina VS20] >gi|530738573|gb|EQC36815.1| 26S proteasome regulatory subunit N6 [Saprolegnia diclina VS20])

HSP 1 Score: 440.654 bits (1132), Expect = 1.293e-148
Identity = 228/425 (53.65%), Postives = 300/425 (70.59%), Query Frame = 0
Query:   44 LKEALEAAEEL---AQSHPSKAITAFHAIV--NTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKI-----PDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSA-VTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            L+E  +AAEE     ++ P ++I AF  ++  + PD + +A  R+KE AIY+L +L+    + +E+  LL++   FF  IPKAKT KIVRTIID+V+K+       S+  Q DLC + +AWC  +K TFLRQRI++RLA++L+ +A Y  AL LI+ LLRE+KK DDKQLLVE HLVE+++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKTA+SYF EAFEA   +    A  CL+YM+L  +  G   DV   V  K+ +K++G  + AL AIA A  +RSLE F AA   Y   L QD L+ HH+ ++YE LLESNL+KII+P+SCVEI HVATLI LP   VE KLSQMILD K +G LDQG+GQL+VYE +T DKT++ GL ++ N+G VV +LFRRA K+
Sbjct:   19 LQEDFDAAEEEMEEGRATPDRSIAAFQRVLAYHGPDEDLEAVHRVKEHAIYKLGQLYTRHGREKELATLLQSVRPFFTTIPKAKTGKIVRTIIDMVSKVETLDHQKSLQFQADLCVDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQTALDLITDLLREIKKLDDKQLLVEIHLVESKLFHALRNVPKAKAALTAARSIANSIYIVPKMQANIDHMSGILHAEERDYKTAYSYFFEAFEALAPIDKTEALACLKYMLLSKIANGHSADVPVIVNGKNAIKFSGIDVEALKAIAKAHDKRSLELFQAATSQYAAQLVQDPLIKHHLGLLYENLLESNLIKIIQPYSCVEISHVATLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNVVGTLFRRADKL 443          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|813122596|ref|XP_012196515.1| (hypothetical protein SPRG_02556 [Saprolegnia parasitica CBS 223.65] >gi|641539042|gb|KDO32863.1| hypothetical protein SPRG_02556 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 436.417 bits (1121), Expect = 6.583e-147
Identity = 230/425 (54.12%), Postives = 301/425 (70.82%), Query Frame = 0
Query:   44 LKEALEAAEEL---AQSHPSKAITAFHAIV--NTPDREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKI-----PDSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVSA-VTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            L+EA +AAEE     +S P ++I AF  ++  + PD + +   R+KE AIY+L +L+    + +E+  LL++   FFA IPKAKT KIVRTIID+V+K+       S+  Q DLC + +AWC  +K TFLRQRI++RLA++L+ +A Y  AL LI+ LLRE+KK DDKQLLVE HLVE+++ HALRN+PKAKAALTAAR+  NSIY+VP MQA +D MSG+LH EE DYKTA+SYF EAFEA   +    A  CL+YM+L  +  G   DV   V  K+ +K++G  + AL AIA A  +RSLE F AA   Y   L QD L+ HH+ ++YE LLESNL+KII+P+SCVEI HVATLI LP   VE KLSQMILD K +G LDQG+GQL+VYE +T DKT++ GL ++ N+G VV +LFRRA K+
Sbjct:   19 LQEAFDAAEEEMEEGRSTPDRSIAAFQHVLAYHGPDEDLEVVHRVKEHAIYKLGQLYTRHGREKELSTLLQSVRPFFATIPKAKTGKIVRTIIDMVSKVETLDHQKSLQFQADLCVDSIAWCNLEKHTFLRQRIQARLASILFEQAKYQTALDLITDLLREIKKLDDKQLLVEIHLVESKLFHALRNVPKAKAALTAARSIANSIYIVPKMQANIDHMSGILHAEERDYKTAYSYFFEAFEALAPIDKTEALACLKYMLLSKIANGHSADVPVIVNGKNAIKFSGIDVEALKAIAKAHDKRSLELFQAATAQYAAQLVQDPLIKHHLGLLYENLLESNLIKIIQPYSCVEISHVATLIKLPLPQVETKLSQMILDHKFHGILDQGRGQLIVYESATEDKTYAAGLGVIQNVGNVVGTLFRRADKL 443          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|570990674|gb|ETP48574.1| (hypothetical protein F442_05708 [Phytophthora parasitica P10297])

HSP 1 Score: 427.943 bits (1099), Expect = 1.311e-143
Identity = 223/443 (50.34%), Postives = 308/443 (69.53%), Query Frame = 0
Query:   28 TNVNAAMEEEESLPDPLKEALEAAEELA-----QSHPSKAITAFHAIVNTP--DREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIP-----DSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVS-AVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            T  +  M E E +  PL+   E AE+LA      + P+ AI AF +I++    D   +  QR+KE +IY+LA+L+    + +E+  LL+    FFA + +AKT KIVRT+ID+V K+      +++ LQ DLC + + WC  +K TFLRQR+E+RLA++ + +  +  AL LI++LL E+KK DDKQLLVE HLVE+++ HALRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKTA+SYF EAFEA  +L ++   KCL+YM+L  V  G   +V+  + SK  +K+ G  + A+ A+A A ++RSLE F+AA K Y   L +D L+ +H+  +YEQLLESNL+KII+PFSCVEI HVA LI LP   +E KLSQMILD K +G LDQGKGQL+VY+    DKT++ GL ++ N+G +VD+LFRRA K+
Sbjct:    3 TTQDVEMAEPEQV-HPLQTQFEDAEDLAVDLTPSTSPNAAIEAFQSIISYAGEDAMLEQVQRVKEHSIYKLAQLYIQFGREKELASLLQALRPFFATLARAKTGKIVRTVIDMVAKVKVLDAENALQLQADLCIDSIEWCKQEKHTFLRQRVEARLASIYFQQNKFQPALDLITELLHEIKKLDDKQLLVEIHLVESKLHHALRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALATLDEVEGLKCLKYMLLAKVASGGASEVNLIINSKQAIKFIGVDLEAMQAVAKAHEQRSLEQFEAATKKYAPQLVEDPLIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVAKLIKLPLPQIELKLSQMILDHKFHGILDQGKGQLIVYDSPVEDKTYTSGLGVIENVGHIVDNLFRRADKL 444          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|675188587|ref|XP_008903178.1| (hypothetical protein PPTG_10267 [Phytophthora parasitica INRA-310] >gi|566027961|gb|ETI50872.1| hypothetical protein F443_05663 [Phytophthora parasitica P1569] >gi|567965288|gb|ETK90759.1| hypothetical protein L915_05527 [Phytophthora parasitica] >gi|567994007|gb|ETL44172.1| hypothetical protein L916_05467 [Phytophthora parasitica] >gi|568023283|gb|ETL97345.1| hypothetical protein L917_05352 [Phytophthora parasitica] >gi|568053675|gb|ETM50495.1| hypothetical protein L914_05476 [Phytophthora parasitica] >gi|568096622|gb|ETN11369.1| hypothetical protein PPTG_10267 [Phytophthora parasitica INRA-310] >gi|570331666|gb|ETO79614.1| hypothetical protein F444_05713 [Phytophthora parasitica P1976] >gi|570955495|gb|ETP20643.1| hypothetical protein F441_05671 [Phytophthora parasitica CJ01A1] >gi|970627814|gb|KUF75628.1| 26S proteasome non-ATPase regulatory subunit 11 [Phytophthora nicotianae])

HSP 1 Score: 426.787 bits (1096), Expect = 3.491e-143
Identity = 223/443 (50.34%), Postives = 307/443 (69.30%), Query Frame = 0
Query:   28 TNVNAAMEEEESLPDPLKEALEAAEELA-----QSHPSKAITAFHAIVNTP--DREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIP-----DSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVS-AVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            T  +  M E E +  PL+   E AE+LA      + P+ AI AF +I++    D   +  QR+KE +IY+LA+L+    + +E+  LL+    FFA + +AKT KIVRT+ID+V K+       ++ LQ DLC + + WC  +K TFLRQR+E+RLA++ + +  +  AL LI++LL E+KK DDKQLLVE HLVE+++ HALRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKTA+SYF EAFEA  +L ++   KCL+YM+L  V  G   +V+  + SK  +K+ G  + A+ A+A A ++RSLE F+AA K Y   L +D L+ +H+  +YEQLLESNL+KII+PFSCVEI HVA LI LP   +E KLSQMILD K +G LDQGKGQL+VY+    DKT++ GL ++ N+G +VD+LFRRA K+
Sbjct:    3 TTQDVEMAEPEQV-HPLQTQFEDAEDLAVDLTPSTSPNAAIEAFQSIISYAGEDAMLEQVQRVKEHSIYKLAQLYIQFGREKELASLLQALRPFFATLARAKTGKIVRTVIDMVAKVKVLDAEKALQLQADLCIDSIEWCKQEKHTFLRQRVEARLASIYFQQNKFQPALDLITELLHEIKKLDDKQLLVEIHLVESKLHHALRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALATLDEVEGLKCLKYMLLAKVASGGASEVNLIINSKQAIKFIGVDLEAMQAVAKAHEQRSLEQFEAATKKYAPQLVEDPLIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVAKLIKLPLPQIELKLSQMILDHKFHGILDQGKGQLIVYDSPVEDKTYTSGLGVIENVGHIVDNLFRRADKL 444          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|695370974|ref|XP_009514443.1| (hypothetical protein PHYSODRAFT_348875 [Phytophthora sojae] >gi|348687354|gb|EGZ27168.1| hypothetical protein PHYSODRAFT_348875 [Phytophthora sojae])

HSP 1 Score: 423.32 bits (1087), Expect = 9.021e-142
Identity = 220/430 (51.16%), Postives = 302/430 (70.23%), Query Frame = 0
Query:   43 PLKEALEAAEELAQSH-----PSKAITAFHAIVNTPDREDDAA----QRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIP-----DSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVS-AVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            PL+   E AE++A +      P  AI AF  I++     +DAA    QR+KE +IY+LA+L+    + +E+  LL++   FFA + +AKT KIVRT+ID+V K+       ++ LQ DLC + + WC  +K TFLRQR+E+RLA++ + +  +  AL LI++LL E+KK DDKQLLVE HLVE+++ HALRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKTA+SYF EAFEA  +L +    KCL+YM+L  +  G   +V+  + SK  +K+ G  + A+ A+A A ++RSLE F+AA K Y   L +D L+ +H+  +YEQLLESNL+KII+PFSCVEI HVA LI LP   +E KLSQMILD K +G LDQGKGQL+VY+  T DKT++ GL ++ N+G +VD+LFRRA K+
Sbjct:   16 PLQTQFEDAEDVAAALTANAAPDAAIQAFQRIISYAG--EDAALEQVQRVKEHSIYKLAQLYIQFGREKELATLLQSLRPFFATLARAKTGKIVRTVIDMVAKVKTLDADKALQLQADLCLDSIEWCKQEKHTFLRQRVEARLASIYFQQQKFQPALDLITELLYEIKKLDDKQLLVEIHLVESKLHHALRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALATLDETEGLKCLKYMLLAKIASGGASEVNLIINSKQAMKFIGIDLEAMQAVAKAHEQRSLEQFEAATKKYAPQLVEDALIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVAKLIKLPLPQIELKLSQMILDHKFHGILDQGKGQLIVYDSPTEDKTYTSGLGVIENVGHIVDNLFRRADKL 443          
BLAST of EWM26981.1 vs. NCBI_GenBank
Match: gi|1214690709|gb|OWZ05851.1| (26S proteasome regulatory subunit N6 [Phytophthora megakarya])

HSP 1 Score: 421.009 bits (1081), Expect = 6.301e-141
Identity = 220/437 (50.34%), Postives = 300/437 (68.65%), Query Frame = 0
Query:   31 NAAMEEEESLPDPLKEALE--AAEELAQSHPSKAITAFHAIVNTP--DREDDAAQRLKEEAIYRLAKLHADAHQFQEVMLLLKTSDVFFAQIPKAKTAKIVRTIIDIVTKIP-----DSVDLQVDLCREVVAWCIAQKRTFLRQRIESRLATLLYARADYSGALALISKLLRELKKFDDKQLLVETHLVEARIDHALRNLPKAKAALTAARTAGNSIYVVPAMQAELDQMSGVLHCEEGDYKTAHSYFLEAFEAFDSLSDLRAPKCLEYMMLCLVLQGTPQDVS-AVTSKHGLKYAGDGMNALIAIAAAAKERSLEAFDAARKTYGGVLAQDLLLTHHVHIVYEQLLESNLLKIIEPFSCVEIEHVATLINLPQKSVERKLSQMILDDKLYGTLDQGKGQLLVYERSTLDKTFSHGLELVGNLGMVVDSLFRRAQKM 457
            +  M E E L  PL+   E       A + P  +I AF  IV+    D E +  QR+KE +IY+LA+L+    + +E+  LL+    FFA + +AKT KIVRT+ID+V K+       ++ LQ DLC + + WC  +K TFLRQR+E+RLA++ + +  +  AL LI++LL E+KK DDKQLLVE HLVE+++ HALRN+PKAKAALTAAR+  N+IYVVP  QA++DQMSG+LH EE DYKTA+SYF EAFEA   L ++   KCL+YM+L  +  G   +V+  + SK  +K+ G  + A+  +A A ++RSLE F+AA   Y   L +D L+ +H+  +YEQLLESNL+KII+PFSCVEI HVATLI LP   +E KLSQMILD K +G LDQGKGQL+VY+  T DKT++ GL ++ N+G +VD+LFRRA K+
Sbjct:    4 DVEMTEAEQL-HPLQTQFEDAEEAAAANTSPDASIQAFQRIVSYAGDDAELEQVQRVKEHSIYKLAQLYIQFGREKELAALLQALRPFFATLARAKTGKIVRTVIDMVAKVQVLDAEKALQLQADLCLDSIEWCKQEKHTFLRQRVEARLASIYFQQHKFQPALDLITELLHEIKKLDDKQLLVEIHLVESKLHHALRNVPKAKAALTAARSISNTIYVVPRTQAQIDQMSGILHAEERDYKTAYSYFFEAFEALAPLDEVEGLKCLKYMLLSKIASGGASEVNLIINSKQAMKFIGIDLEAMQEVAKAHEQRSLEQFEAATMKYAAQLVEDALIKNHLGKLYEQLLESNLIKIIQPFSCVEIAHVATLIKLPLSQIELKLSQMILDHKFHGILDQGKGQLIVYDSPTEDKTYTSGLGVIENVGHIVDNLFRRADKL 439          
The following BLAST results are available for this feature:
BLAST of EWM26981.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109148|gb|EWM26981.1|0.000e+0100.0026s proteasome non-atpase regulatory subunit 11 [N... [more]
gi|298709379|emb|CBJ31312.1|1.085e-17064.36expressed unknown protein [Ectocarpus siliculosus][more]
gi|1173941806|gb|OQR90901.1|1.155e-14954.2426S proteasome non-ATPase regulatory subunit 11-li... [more]
gi|1173951176|gb|OQR99089.1|6.879e-14954.12hypothetical protein ACHHYP_07377 [Achlya hypogyna... [more]
gi|669148068|ref|XP_008609596.1|1.293e-14853.6526S proteasome regulatory subunit N6 [Saprolegnia ... [more]
gi|813122596|ref|XP_012196515.1|6.583e-14754.12hypothetical protein SPRG_02556 [Saprolegnia paras... [more]
gi|570990674|gb|ETP48574.1|1.311e-14350.34hypothetical protein F442_05708 [Phytophthora para... [more]
gi|675188587|ref|XP_008903178.1|3.491e-14350.34hypothetical protein PPTG_10267 [Phytophthora para... [more]
gi|695370974|ref|XP_009514443.1|9.021e-14251.16hypothetical protein PHYSODRAFT_348875 [Phytophtho... [more]
gi|1214690709|gb|OWZ05851.1|6.301e-14150.3426S proteasome regulatory subunit N6 [Phytophthora... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3698rna3698Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications