EWM27009.1, cds3666 (CDS) Nannochloropsis gaditana

Overview
NameEWM27009.1
Unique Namecds3666
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:938386..938514 +
Alignment locationCM002461.1:938768..940552 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27009.1
Productendosomal p24a protein
Orig transcript idgnl|cribi|Naga_100079g7.10198.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:938386..938514 +
CM002461.1supercontigCM002461.1:938768..940552 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR004240EMP70
Homology
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|585109179|gb|EWM27009.1| (endosomal p24a protein [Nannochloropsis gaditana])

HSP 1 Score: 1321.99 bits (3420), Expect = 0.000e+0
Identity = 637/637 (100.00%), Postives = 637/637 (100.00%), Query Frame = 0
Query:    1 MAPSRFHAAVALGAALAAPAATGFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDVSKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQNAFRVVGFRVRPYSIDHKVAEGSKGDTPTLSTCDGIDAGSTAPAQIKEGAVIYYTYDVQWEPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            MAPSRFHAAVALGAALAAPAATGFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDVSKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQNAFRVVGFRVRPYSIDHKVAEGSKGDTPTLSTCDGIDAGSTAPAQIKEGAVIYYTYDVQWEPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD
Sbjct:    1 MAPSRFHAAVALGAALAAPAATGFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDVSKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQNAFRVVGFRVRPYSIDHKVAEGSKGDTPTLSTCDGIDAGSTAPAQIKEGAVIYYTYDVQWEPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|676386665|ref|XP_009036611.1| (hypothetical protein AURANDRAFT_70168 [Aureococcus anophagefferens] >gi|323452739|gb|EGB08612.1| hypothetical protein AURANDRAFT_70168 [Aureococcus anophagefferens])

HSP 1 Score: 741.495 bits (1913), Expect = 0.000e+0
Identity = 383/639 (59.94%), Postives = 459/639 (71.83%), Query Frame = 0
Query:    9 AVALGAALAAPAATGFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDVSKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQNAFRVVGFRVRPYSIDHKVAEGSKGD------TPTLSTCDGIDA---GSTAPAQIKEGAVIYYTYDVQWEPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIP-DQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            A+ LGA   + A   FYLPGVAP  F  G +VELKVNK+TS  TQIPYDYYS  FCRP+ G+    ENLGEFL GD IENSP++L M+ DQ C VLC   L K DVS LK  I E Y +NWIIDNLPAAS+   + Y  T Y+ GF VG  D K     L NHV I ++YH  +  +  RVVGF V P+++ H+ A  +K D       P L TCD        S A  Q      + +TYDV W  S+V+WASRWDIYL+MD+  +DKVHWFSI NS LIVLFL+ M+AMILVRNL RDI  YNR  T+EE+AE+REESGWKLVHADVFR PAS PML  V  GTG Q+L+     IVFAA GFLSPANRG+L  AVL+ +V+MG+ AGY +A LYKTFKG+ WQKCT+ TA  YP +CF  FL  D +  SYGS+GAVP L +L LL LWFG+SVPLVF+GAYLG+KR+ +++PV+TSNIPR +P  QPWY+S  F  +VGGILPFGACFVELFFIL+SMW+  YYYVFGF  LVFVIL++TC E+T+VL YFQLC+E+YHWWWR+FL++GST LYVLLYS VYF R      F TY+LYFGYM +ISLG+F +TG  GF A L F + I+ASIKVD
Sbjct:    5 ALLLGALAGSDA---FYLPGVAPRTFRYGDKVELKVNKLTSVHTQIPYDYYSLKFCRPRGGIKRATENLGEFLGGDLIENSPFQLFMEQDQFCKVLCQVDLAKSDVSALKTIIKEEYHNNWIIDNLPAASIVDSEQYIITAYAGGFPVGYQDHKASY--LFNHVNIIVEYHPLD--DGSRVVGFYVEPFTVKHRFAGDAKWDGKDVAEAPVLETCDKSGPMVYESIAAKQDVSVGTVVFTYDVLWRASNVKWASRWDIYLSMDNQVSDKVHWFSIINSLLIVLFLSVMVAMILVRNLHRDIVRYNRTLTDEEKAEDREESGWKLVHADVFRPPASCPMLFCVACGTGVQVLLCTTICIVFAAAGFLSPANRGSLATAVLVLFVMMGAPAGYTAATLYKTFKGRLWQKCTLYTAFAYPGVCFVTFLSFDGMLYSYGSTGAVPLLSLLSLLALWFGVSVPLVFLGAYLGFKREPLSYPVITSNIPREVPAPQPWYLSLGFTTLVGGILPFGACFVELFFILSSMWMDQYYYVFGFTALVFVILIVTCCEITIVLCYFQLCSENYHWWWRAFLTSGSTALYVLLYSCVYFGRLAADEWF-TYVLYFGYMILISLGLFALTGACGFFACLWFTKKIYASIKVD 635          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|676397969|ref|XP_009042262.1| (hypothetical protein AURANDRAFT_34561 [Aureococcus anophagefferens] >gi|323447080|gb|EGB03038.1| hypothetical protein AURANDRAFT_34561 [Aureococcus anophagefferens])

HSP 1 Score: 728.398 bits (1879), Expect = 0.000e+0
Identity = 366/641 (57.10%), Postives = 452/641 (70.51%), Query Frame = 0
Query:   16 LAAPAATGFYLPGVAPTNFLEGQRVELK----VNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDVSKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQNAFRVVGFRVRPYSIDHKVAEGS----KGDTPTLSTCD-----GIDAGSTAPAQIKEGAVIYYTYDVQWEPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEER-----AEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSY-GSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            LA  AA  FYLPGVAP  +  G++VELK    VNK+TS  TQ+PYDYYS  FC+P  GV    ENLGEFL+GDRIENSPY L M+ D+ C +LC   L  G V++ K +I E Y HNWI+DN+PAASV   + + TT YSRGF VG  D       L+NH  I ++YH+    +  R+VGF V P+S+DHK   G+      D P L TC       +D        + +   + YTYD+ W+PS+++WASRWDIYL+MD+    KVHWFSI NS +IV+ L+GMIAMIL RNL RDI+ YNRVPT+++       +  EE+GWKLVH DVFR P   PMLL V VG+G Q+L+MA  TI FAAVGF+SPANRG+LM  +LL +VLMG+ AGY  ARLYK+FKG++WQ+ TV TAL +P   F VF  LD    SY GS+GAVP   +L LL LWFGISVPLVF+GAYLG++++ + FP   SNIPR +P  PWY+S  F +++GG+LPFGACFVELFFIL+SMW+  YYYVFGF  LVF IL++TCAE+T+VL YFQLC EDYHWWWRSFL++GST  YV LYS  YF + ++ NL  TY LYFGYMGIIS GIFL TG +GF A+L FN VIF SIKVD
Sbjct:   10 LALTAARAFYLPGVAPREYKSGEKVELKARPDVNKLTSVHTQLPYDYYSHKFCKPHGGVKTTAENLGEFLSGDRIENSPYALYMRTDEYCKILCQVKLNGGHVAQFKRSIDEAYHHNWIVDNIPAASVIDTEAFVTTSYSRGFPVGYYDRLAGKHYLYNHANIVVEYHEAV-PDGNRIVGFYVEPFSVDHKFVGGTAWSGNEDAPALETCSIFEPMDLDRAKDHGLALTKSTKVLYTYDIVWKPSNIKWASRWDIYLSMDNAVPKKVHWFSIVNSLMIVICLSGMIAMILARNLRRDISQYNRVPTDDDDDGDIGTQPSEETGWKLVHQDVFRPPTILPMLLCVFVGSGVQVLVMALATIAFAAVGFISPANRGSLMFVMLLLFVLMGAFAGYHCARLYKSFKGQRWQRATVATALLFPGGSFIVFFGLDLTLASYEGSTGAVPITTLLALLALWFGISVPLVFLGAYLGFRKEPLEFPAKFSNIPRLVPTAPWYLSTTFTVVIGGVLPFGACFVELFFILSSMWMDQYYYVFGFTFLVFAILIVTCAEITMVLLYFQLCAEDYHWWWRSFLTSGSTAAYVFLYSSFYFSK-LESNLPITYFLYFGYMGIISFGIFLFTGTVGFFAALWFNVVIFGSIKVD 648          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|1072237572|gb|OEU22299.1| (multispanning membrane protein-like protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0
Identity = 356/637 (55.89%), Postives = 447/637 (70.17%), Query Frame = 0
Query:   20 AATGFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDVSKLKE-----AILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEG----QNAFRVVGFRVRPYSIDHKV-AEGSKGD--------TPTLSTCDGIDAGSTAPAQIKEGAVIYYTYDVQW-EPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            A   FYLPGV P +F EG  V++KVNK+TS++T +P +YY  PFC+P+ G     ENLGEFL GDRIE+SPY L MK +  C  +C   L   +   +K+     AI + Y +NWI+DNL AAS   D+   TT Y +GF VG   +      LHNHV + + YH  E     +  +RVV F V P+SI H   + G K D          + +T D I      P Q+  G V++ TYDV W E  D+ WASRWDIYL+MD+    KVHW SIANS +IV+ L+ M+  IL+RNL +D+  YNR+ T+EE+A++ EE GWKLVHAD+FR P+  P+LL+V  GTGAQLL M F TI+F+A+GFLSPA RGAL++A LL +VLMGSV GYV+AR+YKTFKGK WQ  TV TAL +P +CFS+F  LD I   YGSS AVPF  ML LL LWFGIS PLVF+GAY GYK+D + FPV TSNIPR IPDQPW+MS  F + +GG+LPFGACFVEL+FIL S+W+  YYYVFGFL LVFVIL++TCAE+T++  YFQLCNEDYHWWWRSF +AGST ++V LYS VY F+ ++ N   TY+LYFGYMG+ SLG+FLMTG IG A++L FN+ IF S+KVD
Sbjct:   21 ACHAFYLPGVNPQSFAEGDPVKMKVNKMTSSKTLLPIEYYRLPFCQPRGGPKMDNENLGEFLAGDRIESSPYVLNMKTEMYCEQVCIANLGVAEQRGMKKNKFVRAINQEYHNNWIVDNLSAASKAEDETTITTRYWQGFPVGFIADDSHLAYLHNHVNLEIMYHPVEKIGDEEQKYRVVRFTVEPFSIKHDFKSSGEKDDFTSNDDENQRSHTTYDMITEPDREP-QLASGQVLF-TYDVHWVENLDLHWASRWDIYLSMDNAIPAKVHWLSIANSLVIVVVLSAMVVAILLRNLRQDLARYNRLATDEEKADDLEEKGWKLVHADIFRPPSFSPLLLSVCCGTGAQLLCMTFWTIIFSAMGFLSPARRGALLMAELLFFVLMGSVNGYVTARMYKTFKGKAWQNATVCTALGFPGLCFSLFFALDLIAWGYGSSDAVPFTTMLVLLVLWFGISTPLVFVGAYFGYKQDAIEFPVKTSNIPRQIPDQPWFMSIPFTVFIGGLLPFGACFVELYFILASVWMDYYYYVFGFLFLVFVILIITCAEITLLFNYFQLCNEDYHWWWRSFGNAGSTAIWVFLYSFVY-FQQLEANSLTTYVLYFGYMGLASLGLFLMTGFIGVASTLWFNKTIFGSLKVD 654          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|224009001|ref|XP_002293459.1| (multispanning membrane protein [Thalassiosira pseudonana CCMP1335] >gi|220970859|gb|EED89195.1| multispanning membrane protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 684.1 bits (1764), Expect = 0.000e+0
Identity = 362/646 (56.04%), Postives = 451/646 (69.81%), Query Frame = 0
Query:   11 ALGAALAAPAATGFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDV-----SKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQ-NAFRVVGFRVRPYSIDHKVAEGSKGDTPTLSTCDG------------IDAGSTAPAQIKEGAVIYYTYDVQW-EPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            AL A+L    A GFYLPGV P +F EG+ V+LKVNK+TS +T +P DYY  PFC+P  G     ENLGEFL GDRIE+SPY L  KVD  C  +C   L +G+      +K+  AI + Y +NWI+DN+PAAS   DD   TT Y +GF VG      +   +HNHV I ++YH  E      R+V F V P+SI H   E +    P + +C+             I A   AP Q   G V++ TYDV W E +++ WASRWD+YL+MD+    KVHW SIANS +IV+ L+ MIA ILVRNL RD + YNR+ T+EE+ E+ EE GWKLVHADVFR P+  P+LLAV  GTGAQLL M   TI+F+A+GFLSPANRGAL++A LL YVLMG+VAGYV+AR+YKTFKGK WQK T   A  +P +CF +FL ++ + +S GSS AVP   M+ LL LWFGIS PLVF GAY GYK+D + FPV TS+IPR IPDQPW+M   F ++VGGILPFGACFVEL+FIL S+W+  YYYVF FLLLVF+IL++TCAE+TV+  YFQLC E+YHWWWRSF +AGSTGLYV LYS VY F+ ++ N  ATY+LYFGYMG+ SLG+FLMTG +G    L FN+ I+ SIK+D
Sbjct:    4 ALLASLLLQGAHGFYLPGVNPYSFTEGEVVKLKVNKMTSQKTLLPVDYYRLPFCQPPGGPKMDHENLGEFLAGDRIESSPYRLNFKVDMYCEQVCITNLGRGEQQGVSPNKMVRAIRKNYHNNWIVDNIPAASKVEDDNTVTTRYWQGFPVGFIASDTKKAHVHNHVNIEVEYHAVETDPTKARIVRFTVEPFSIKHDF-EATDIQNP-IESCNTKSANRAHTKYEMIYAHGRAP-QEASGRVLF-TYDVIWTENANLHWASRWDVYLSMDNAIPAKVHWLSIANSLVIVIVLSAMIAAILVRNLRRDFSRYNRLATDEEKQEDLEEFGWKLVHADVFRPPSFSPLLLAVACGTGAQLLCMTILTILFSAMGFLSPANRGALIMAQLLLYVLMGTVAGYVTARMYKTFKGKSWQKATAAVAFGFPGVCFGLFLIMNIVALSQGSSDAVPVTTMIVLLVLWFGISTPLVFFGAYFGYKQDAIEFPVNTSSIPRQIPDQPWFMGIPFTLLVGGILPFGACFVELYFILASVWMDQYYYVFAFLLLVFLILVVTCAEITVLFCYFQLCGENYHWWWRSFSTAGSTGLYVFLYSFVY-FKQLEANQLATYVLYFGYMGLASLGLFLMTGFVGVVTCLWFNKTIYGSIKID 644          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|219123195|ref|XP_002181915.1| (tocopherol cyclase, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217406516|gb|EEC46455.1| tocopherol cyclase, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 682.559 bits (1760), Expect = 0.000e+0
Identity = 342/626 (54.63%), Postives = 439/626 (70.13%), Query Frame = 0
Query:   24 FYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDV-----SKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQ-NAFRVVGFRVRPYSIDHKVAEGSKGDTPTL-----STCDGIDAGSTAPAQIKEGAVIYYTYDVQWE-PSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            FYLPG     F +   V+LKVNK+TST+T +P DYY  PFC P+ G     ENLGEFL+GDRIE+SPY L+MK D  C  LC   L +G+      +K  +AI + Y +NWI+DNL +AS   +D   TT Y +GF VG      + + ++NHV I + YH  + + + +R+V F V P+SI H                  +T D I      P Q   G V++ TYDV+WE  ++V+WASRWDIYLNMD     KVHW SIANS +IV  L+ MIA IL+RNL RDI+ YNR+ T+EE+AE+ EE GWKLVHADVFR P   P+LLAV  GTGAQLL M F TI F+A+GF+SPA RG L++A LL +V MG +AGYV+ARLYKTFKGK WQK T LTA+ +P ICF VF+ ++ I ++  S+ AVPF+ ML L+ LWFGIS PLVF GAY GYK + + FPV TS+IPR IPDQPW+M   F + +GGILPFG+CFVEL++IL S+W+  YYYVFGFL LVF+IL++TCAE+T++ TYFQLC+EDYHWWWRSF +AGST  YV LYS +++F+ ++ NL ATY+LYFGYM +  LG+F M G +G + SL FN+VIF+SIK+D
Sbjct:    1 FYLPGANSQAFADNDPVKLKVNKLTSTKTLMPIDYYRLPFCIPEGGAKMDNENLGEFLSGDRIESSPYVLQMKNDMYCEQLCIANLGRGEQRGVQPNKFVKAIRKNYHNNWIVDNLSSASKAENDKEVTTRYWQGFPVGFIGNDGQAY-VNNHVNIEIMYHPSDTETDKYRIVRFVVEPFSIKHDSEPVVDDTNDVDDTHTHTTYDMITQSGREP-QRASGQVLF-TYDVKWELNTEVKWASRWDIYLNMDDAVPAKVHWLSIANSLVIVFVLSAMIAAILIRNLRRDISRYNRLATDEEKAEDLEEYGWKLVHADVFRPPTFSPLLLAVACGTGAQLLAMTFLTIAFSAMGFMSPARRGHLLMAELLLFVCMGGLAGYVTARLYKTFKGKSWQKATTLTAVGFPGICFGVFIIMNVIALAKQSTDAVPFVTMLILVVLWFGISTPLVFFGAYFGYKHEAIEFPVNTSSIPRQIPDQPWFMGIPFTMAIGGILPFGSCFVELYYILASVWMDYYYYVFGFLFLVFLILIITCAEITLLFTYFQLCSEDYHWWWRSFANAGSTSAYVFLYS-IFYFQQLEANLLATYVLYFGYMALSCLGLFCMMGFVGMSTSLWFNKVIFSSIKID 622          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|1210519274|dbj|GAX21858.1| (hypothetical protein FisN_30Hh059 [Fistulifera solaris])

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 345/645 (53.49%), Postives = 437/645 (67.75%), Query Frame = 0
Query:   23 GFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDV-----SKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQ-NAFRVVGFRVRPYSIDHKVAEG--------------SKGDTPTLSTCDGIDAGST--------APAQIKEGAVIYYTYDVQW-EPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREES-GWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
             +Y+PG +P +F +G  VELKVNK+TST+T  P +YYS  FC+PQ G+    ENLGEFL+GDRIENSPY LKMK D  C  +C   L + +      SKL +AI   Y +NWI+DNLPAAS   DD + TT Y +GF +G   +      +HNHV I + YH+ EG    +RVV F V P+SI H   E               +K   P  S      + +T           Q+  G  ++ TYDV W E  D+ WASRWD+YL MD     KVHW SIANS +IV  L+ MIA ILVRNL RDI  YN+V  +EE   E  E  GWKLVHADVFR P ++PML++V  GTGAQLL M+   IVFAA+GF+SPA RG L++  L  +VL+G V GYV+A+LYKTFKGK WQ+ T  TAL +P + FS+FL ++ + +   S+ AVPF  ML L+ LWFGIS PLVF+GAY GYK+D + FPV TS+IPR IPDQPW+M   F + +GGILPFG+CFVEL++IL S+W+  YYYVFGFLLLVF IL++TCAE+TV+ TYFQLC+EDYHWWWRSF +AGST +YV +YS +Y F+ ++ N  ATY+LYFGYMG++S G+F+M GCIG   SL FN+ IFASIK+D
Sbjct:   25 AYYIPGTSPRSFSKGDAVELKVNKVTSTKTLYPVEYYSLSFCQPQEGIKRMNENLGEFLSGDRIENSPYLLKMKTDMYCEQVCIANLGRAEQKGTAPSKLAKAIHLNYHNNWIVDNLPAASKVEDDEHITTRYWQGFPIGYVAQDNNKAYVHNHVNIEVVYHEVEGDPGKYRVVQFLVEPFSIKHDFEETLDVDVEDEHYLPAIAKMKNPIRSCARNSKSHTTYDMVTESGREGQLASGPALF-TYDVIWTENKDLHWASRWDVYLTMDGAVPAKVHWLSIANSMIIVFVLSAMIAAILVRNLHRDINRYNKVAQDEESRAEELEEYGWKLVHADVFRPP-NYPMLMSVFCGTGAQLLCMSLLVIVFAALGFMSPARRGHLIMVQLFLFVLLGGVNGYVTAKLYKTFKGKHWQRATTATALGFPGLAFSLFLIMNALALHEKSTDAVPFTTMLILIVLWFGISTPLVFLGAYFGYKQDPIAFPVNTSSIPRQIPDQPWFMGLPFTLGIGGILPFGSCFVELYYILASVWMDYYYYVFGFLLLVFFILVITCAEITVLFTYFQLCSEDYHWWWRSFSNAGSTAIYVFMYSIIY-FKQLEANTLATYMLYFGYMGLVSTGLFMMMGCIGVLTSLWFNQTIFASIKID 666          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|1210527486|dbj|GAX13771.1| (hypothetical protein FisN_30Lh059 [Fistulifera solaris])

HSP 1 Score: 671.003 bits (1730), Expect = 0.000e+0
Identity = 345/647 (53.32%), Postives = 437/647 (67.54%), Query Frame = 0
Query:   21 ATGFYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDV-----SKLKEAILEGYSHNWIIDNLPAASVTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQKEGQ-NAFRVVGFRVRPYSIDHKVAEG--------------SKGDTPTLSTCDGIDAGST--------APAQIKEGAVIYYTYDVQW-EPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREES-GWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            A  +Y+PG +P +F +G  VELKVNK+TST+T  P +YYS  FC+P  G+    ENLGEFL+GDRIENSPY LKMK D  C  +C   L + +      SKL +AI   Y +NWI+DNLPAAS   DD + TT Y +GF +G   +      +HNHV I + YH+ EG    +RVV F V P+SI H   E               +K   P  S      + +T           Q+  G  ++ TYDV W E  D+ WASRWD+YL MD     KVHW SIANS +IV  L+ MIA ILVRNL RDI  YN+V  +EE   E  E  GWKLVHADVFR P ++PML++V  GTGAQLL M+   IVFAA+GF+SPA RG L++  L  +VL+G V GYV+A+LYKTFKGK WQ+ T  TAL +P + FS+FL ++ + +   S+ AVPF  ML L+ LWFGIS PLVF+GAY GYK+D + FPV TS+IPR IPDQPW+M   F + +GGILPFG+CFVEL++IL S+W+  YYYVFGFLLLVF IL++TCAE+TV+ TYFQLC+EDYHWWWRSF +AGST +YV +YS +Y F+ ++ N  ATY+LYFGYMG++S G+F+M GCIG   SL FN+ IFASIK+D
Sbjct:   27 ANAYYIPGTSPRSFSKGDAVELKVNKVTSTKTLYPVEYYSLSFCQPPEGIKRMNENLGEFLSGDRIENSPYLLKMKTDMYCEQVCIANLGRAEQKGTAPSKLAKAIHLNYHNNWIVDNLPAASKVEDDEHITTRYWQGFPIGYVAQDNNKAYVHNHVNIEVVYHEVEGDPGKYRVVQFLVEPFSIKHDFEETLDVDVEDEHYLPAIAKIKNPIRSCARNSKSHTTYDMVTESGREGQLASGHALF-TYDVIWTENKDLHWASRWDVYLTMDGAVPAKVHWLSIANSMIIVFVLSAMIAAILVRNLHRDINRYNKVAQDEESRAEELEEYGWKLVHADVFRPP-NYPMLMSVFCGTGAQLLCMSLLVIVFAALGFMSPARRGHLIMVQLFLFVLLGGVNGYVTAKLYKTFKGKHWQRATTATALGFPGLAFSLFLVMNALALHEKSTDAVPFTTMLILIVLWFGISTPLVFLGAYFGYKQDPIAFPVNTSSIPRQIPDQPWFMGLPFTLGIGGILPFGSCFVELYYILASVWMDYYYYVFGFLLLVFFILVITCAEITVLFTYFQLCSEDYHWWWRSFSNAGSTAIYVFMYSIIY-FKQLEANTLATYMLYFGYMGLVSTGLFMMMGCIGLLTSLWFNQTIFASIKID 670          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|298715661|emb|CBJ28187.1| (putative multispanning membrane protein [Ectocarpus siliculosus])

HSP 1 Score: 669.463 bits (1726), Expect = 0.000e+0
Identity = 344/598 (57.53%), Postives = 436/598 (72.91%), Query Frame = 0
Query:   62 PFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGD---VSKLKEAILEGYSHNWIIDNLPAAS---VTVDDVYQTTYYSRGFLVGMTDEKQETFALHNHVRIFLDYHQK--EGQNAFRVVGFRVRPYSIDHKVAE------GSKGDTPTLSTCDGID-----AGSTAPAQIKEGAV---IYYTYDVQWEPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            PFC P+ G     ENLGEFL+GDRIE SPY + M+ + SCT LC   L   D   V  L++AI   Y HNWIIDNLPAAS   V  +D  QT YYS+GF VG   + +  + ++NHV + +DYH    E + + RVVGF+V P+S+ H          G+ GD P LSTC+  +       +  P+Q +E AV   I YTYDV W+ SD  WASRWDIYL M+H   ++VHWFSI NS LIVLFLT MIAMIL+RNL RDI  YNRVPT+EE+AEEREE+GWKLVHADVFR PA +PML  V+VGTG QLL M   TI FAA+GF++P+NRG+L +++LL YVLMG  AGY S+ LYK+FKG+QWQ+CT+LTAL +PS+CF++FL L+ +   Y S+ AVPF+E++K+L LWF ISVP+VF+GAY GY++ V  +PVVTSNIPR IPDQPW++   F I VGGILP+GA F+E+FFIL S+W+G YYYVFGFL+LVF+IL++TCA++ +V  YFQLC EDYHWWWRSFL+  STG +V  YS +Y F  +Q  + ATY+LYFGYM ++SLG+  +TGCIGF + L F R I+ASIKVD
Sbjct:    2 PFCTPEGGARMTSENLGEFLSGDRIETSPYSIYMQHNISCTALCQVELQDADKEKVDNLQKAIRRDYRHNWIIDNLPAASLVPVEGEDATQT-YYSQGFPVGEVIDGK--YYVNNHVHMVVDYHPMDLEEEPSARVVGFKVEPFSVKHAFQSPAAYWTGAPGDMPPLSTCEKDNFINPVKPTVDPSQKQEVAVGQRIIYTYDVAWKQSDTHWASRWDIYLTMNHAVKNRVHWFSIVNSLLIVLFLTAMIAMILIRNLHRDIMRYNRVPTDEEKAEEREETGWKLVHADVFRPPAKYPMLFCVLVGTGVQLLCMGIVTIAFAAIGFVNPSNRGSLAVSMLLLYVLMGVPAGYSSSVLYKSFKGRQWQQCTLLTALLFPSLCFTIFLSLNLMSQRYHSTQAVPFVEIIKVLALWFCISVPMVFLGAYFGYRKPVEPYPVVTSNIPRQIPDQPWFLWSCFTITVGGILPYGAVFIEMFFILQSLWMGNYYYVFGFLMLVFIILIVTCADIAMVFCYFQLCAEDYHWWWRSFLTTASTGAWVFAYSAIY-FSNLQSTMLATYVLYFGYMALLSLGLAALTGCIGFYSCLWFTRKIYASIKVD 595          
BLAST of EWM27009.1 vs. NCBI_GenBank
Match: gi|702376506|ref|XP_010062626.1| (PREDICTED: transmembrane 9 superfamily member 7 [Eucalyptus grandis] >gi|629104286|gb|KCW69755.1| hypothetical protein EUGRSUZ_F03131 [Eucalyptus grandis])

HSP 1 Score: 645.195 bits (1663), Expect = 0.000e+0
Identity = 321/623 (51.52%), Postives = 427/623 (68.54%), Query Frame = 0
Query:   24 FYLPGVAPTNFLEGQRVELKVNKITSTQTQIPYDYYSFPFCRPQNGVHHYGENLGEFLTGDRIENSPYELKMKVDQSCTVLCSHTLTKGDVSKLKEAILEGYSHNWIIDNLPAASV-TVDDVYQTTYYSRGFLVGMTDE----KQETFALHNHVRIFLDYHQKEGQNAFRVVGFRVRPYSIDHKVAEGSKGDTPTLSTCDG----IDAGSTAPAQIKEGAVIYYTYDVQWEPSDVRWASRWDIYLNMDHTKTDKVHWFSIANSALIVLFLTGMIAMILVRNLCRDITMYNRVPTEEERAEEREESGWKLVHADVFRAPASHPMLLAVMVGTGAQLLMMAFCTIVFAAVGFLSPANRGALMIAVLLTYVLMGSVAGYVSARLYKTFKGKQWQKCTVLTALWYPSICFSVFLCLDFIDVSYGSSGAVPFLEMLKLLTLWFGISVPLVFMGAYLGYKRDVMTFPVVTSNIPRTIPDQPWYMSKAFIIMVGGILPFGACFVELFFILTSMWLGAYYYVFGFLLLVFVILLLTCAEMTVVLTYFQLCNEDYHWWWRSFLSAGSTGLYVLLYSGVYFFRTVQPNLFATYLLYFGYMGIISLGIFLMTGCIGFAASLAFNRVIFASIKVD 637
            FYLPGVAP +F+ G+ + +KVNK++ST+TQ+PYDYY   +C+P + + +  ENLGE L GDRIENS Y  +M+ ++ C V C  TL        KE I + Y  N I+DNLP A +    D  Q+T Y  GF VG        K+E + ++NH+   + +H+ E  +  R+VGF V P SI H   E      P ++TC+     +  GST P ++     + +TYDV +  SD++WASRWD YL M+    D++HWFSI NS +IVLFL+GM+AMI++R L RDI  YN++ T++E    +EE+GWKLVH DVFRAP  +P LL V VGTG Q+  MA  T++FA +GFLSP+NRG LM A++L +V MG  AGY S+RLYK FKG +W+K T+ TA+ +P I F+VF  L+ +     SSGAVPF  M  L  LWFGISVPLVF+G+YLG+K+  M  PV T+ IPR IP+Q WYM   F I++GGILPFGA F+ELFFILTS+WL  +YY+FGFL +VFVILL+TCAE+T+VL YFQLC+EDYHWWWRS+L+AGS+ LY+ LYS  YFF  ++   F + +LYFGYM IIS   F++TG IGF A   F R I++S+K+D
Sbjct:   25 FYLPGVAPRDFITGEELIVKVNKLSSTKTQLPYDYYYLKYCKP-DKILNSAENLGEVLRGDRIENSVYRFRMREEEPCKVACRLTLDAESAKNFKEKIDDEYRVNMILDNLPVAVLRQRRDGSQSTTYEHGFRVGFKGNYAGSKEEKYFINNHLSFRVKFHKDELTDTARIVGFEVTPNSIKHDYKEWD-AKNPQVTTCNANTKNLVQGSTVPQEVDTDKEVVFTYDVSFMESDIKWASRWDTYLLMND---DQIHWFSIINSLMIVLFLSGMVAMIMMRTLYRDIANYNQLETQDE---AQEETGWKLVHGDVFRAPI-NPGLLCVYVGTGVQIFAMALVTMIFALLGFLSPSNRGGLMTAMVLLWVFMGLFAGYSSSRLYKMFKGTEWKKTTLKTAVMFPGILFAVFFVLNALIWEERSSGAVPFGTMFALFCLWFGISVPLVFVGSYLGFKKPPMEDPVKTNKIPRQIPEQAWYMKPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLVTCAEITIVLCYFQLCSEDYHWWWRSYLTAGSSALYLFLYSVFYFFTKLEITKFVSGILYFGYMIIISYAFFVLTGTIGFYACFWFVRKIYSSVKID 638          
The following BLAST results are available for this feature:
BLAST of EWM27009.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109179|gb|EWM27009.1|0.000e+0100.00endosomal p24a protein [Nannochloropsis gaditana][more]
gi|676386665|ref|XP_009036611.1|0.000e+059.94hypothetical protein AURANDRAFT_70168 [Aureococcus... [more]
gi|676397969|ref|XP_009042262.1|0.000e+057.10hypothetical protein AURANDRAFT_34561 [Aureococcus... [more]
gi|1072237572|gb|OEU22299.1|0.000e+055.89multispanning membrane protein-like protein [Fragi... [more]
gi|224009001|ref|XP_002293459.1|0.000e+056.04multispanning membrane protein [Thalassiosira pseu... [more]
gi|219123195|ref|XP_002181915.1|0.000e+054.63tocopherol cyclase, partial [Phaeodactylum tricorn... [more]
gi|1210519274|dbj|GAX21858.1|0.000e+053.49hypothetical protein FisN_30Hh059 [Fistulifera sol... [more]
gi|1210527486|dbj|GAX13771.1|0.000e+053.32hypothetical protein FisN_30Lh059 [Fistulifera sol... [more]
gi|298715661|emb|CBJ28187.1|0.000e+057.53putative multispanning membrane protein [Ectocarpu... [more]
gi|702376506|ref|XP_010062626.1|0.000e+051.52PREDICTED: transmembrane 9 superfamily member 7 [E... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3675rna3675Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications