EWM27004.1, cds3665 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|585109174|gb|EWM27004.1| (nudix hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0 Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0
Query: 1 MEALQYNPRWASANPSGPPIQGFRKGLQSLWRFMQYNSIYTGVIMYALFISIRHLRMVGKQRGPFVWQVQGISPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSITACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYWYDRNQSRTVLAPKRGTSTCPAPYPVDS 251
MEALQYNPRWASANPSGPPIQGFRKGLQSLWRFMQYNSIYTGVIMYALFISIRHLRMVGKQRGPFVWQVQGISPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSITACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYWYDRNQSRTVLAPKRGTSTCPAPYPVDS
Sbjct: 1 MEALQYNPRWASANPSGPPIQGFRKGLQSLWRFMQYNSIYTGVIMYALFISIRHLRMVGKQRGPFVWQVQGISPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSITACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYWYDRNQSRTVLAPKRGTSTCPAPYPVDS 251
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|298707680|emb|CBJ25997.1| (MutT-like protein [Ectocarpus siliculosus]) HSP 1 Score: 121.324 bits (303), Expect = 2.799e-30 Identity = 57/135 (42.22%), Postives = 82/135 (60.74%), Query Frame = 0
Query: 90 LCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSITACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYW 224
+C PS+A+D ++E S+ G V +++ ++R+D AC+GGFV++GET EEA REV+EE G L +Y P RD RRHT+S AYV R G +AG DA ++ IPL + + + FDHG I+ Y
Sbjct: 1 MCTPSLAIDTVVEVSDPATGEVGSVLVVRRKDNGKLACIGGFVEVGETLEEATRREVREETGLEVTSLQMLPQMYDDPARDARRHTVSVAYVARTTGTPRAGSDAAAVVSIPLASLGETVGEFAFDHGQIMTDYL 135
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|1210524420|dbj|GAX16678.1| (hypothetical protein FisN_21Hu117 [Fistulifera solaris]) HSP 1 Score: 110.923 bits (276), Expect = 5.601e-26 Identity = 66/160 (41.25%), Postives = 87/160 (54.37%), Query Frame = 0
Query: 67 WQVQGISPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSITACVGGFVQLGETTEEALHREVQEEIGTNTLHSV-RLIGVYSHPDRDDRRHTISAAYVGRVYG--RLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSY 223
W S H GSC+C D +CLC PS+A+D ++ + ++R+D S A VGGFVQ+GE+ EEA+ RE+ EE G T+ S RLIG+YS P RD+RRHT+S Y + G +A DD K + IP VE DH IL Y
Sbjct: 59 WHGGHPSDAHAGSCWCGDTDGYCLCTPSLAIDLVVMTGRDH------VWLVRRKDTSQLATVGGFVQMGESVEEAVLRELAEETGIKTIPSRPRLIGIYSDPRRDNRRHTVSVTYAIHLDGTEHPEAADDVKEVIKIPFS--EVENHTYFADHKTILLDY 210
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|1055713312|ref|WP_067329558.1| (NUDIX hydrolase [Sulfurovum riftiae] >gi|1008705937|gb|KYJ87030.1| NUDIX hydrolase [Sulfurovum riftiae]) HSP 1 Score: 101.679 bits (252), Expect = 1.759e-23 Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 0
Query: 93 PSVAVDAILEYSETKEGPVTALVFIKRRDRSI-TACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYWYDRNQS 230
P VAVD I+ + E +V I+R++ + A GGFV +GE+ E AL RE++EEI + + +RL+GVYS P RD R HT+SA Y+ + YG KA DDAK V P + +E KL FDH I++ + R QS
Sbjct: 6 PFVAVDGIVMLYDRNEA-FKGIVLIERKNPPLGIALPGGFVDIGESCESALVREMKEEISLD-VEIIRLLGVYSDPKRDPRFHTVSAVYICKAYGEPKAADDAKKCFVYPPDEIPME--KLVFDHAKIIKDFMATRYQS 140
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|499570451|ref|WP_011251234.1| (NUDIX hydrolase [Thermococcus kodakarensis] >gi|57160543|dbj|BAD86473.1| probable 8-oxo-dGTPase, MutT homolog, NUDIX hydrolase family [Thermococcus kodakarensis KOD1]) HSP 1 Score: 102.064 bits (253), Expect = 2.685e-23 Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 0
Query: 95 VAVDAILEYSETKEGPVTALVFIKRRDRSIT---ACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPL-KVMNVELIKLGFDHGDILRS 222
+ VDA++ Y+ +V IKR++ A GGFV+ GET EEAL REV+EE G + + V+L+GVYS PDRD R HT++ A++ G LKAGDDAK + V P+ + +N + L FDHG+ILR
Sbjct: 42 LTVDAVIVYN-------NGIVLIKRKNEPFKDHYALPGGFVEYGETVEEALLREVKEETGLD-VKPVKLVGVYSRPDRDPRGHTVTVAFLCIGEGELKAGDDAKEVFVFPIEEALN---LPLAFDHGEILRD 162
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|1011493561|ref|WP_062388238.1| (NUDIX hydrolase [Thermococcus peptonophilus] >gi|1005658165|gb|AMQ18386.1| NUDIX hydrolase [Thermococcus peptonophilus]) HSP 1 Score: 101.679 bits (252), Expect = 2.923e-23 Identity = 61/133 (45.86%), Postives = 84/133 (63.16%), Query Frame = 0
Query: 95 VAVDAILEYSETKEGPVTALVFIKRRD---RSITACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIK--LGFDHGDILRS 222
+ VDA++ Y+ +V IKR++ + A GGFV+ GET EEAL REV+EE G + + V+L+GVYS PDRD R HT++ A++ G LKAGDDAK + V P++ E +K L FDHG+ILR
Sbjct: 42 LTVDAVIVYN-------NGIVLIKRKNEPFKDYYALPGGFVEYGETVEEALLREVKEETGLD-VKPVKLVGVYSRPDRDPRGHTVTVAFLCIGEGELKAGDDAKEVFVFPIE----EALKLPLAFDHGEILRD 162
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|851287202|ref|WP_048150956.1| (NUDIX hydrolase [Thermococcus sp. AM4]) HSP 1 Score: 100.908 bits (250), Expect = 6.861e-23 Identity = 65/173 (37.57%), Postives = 95/173 (54.91%), Query Frame = 0
Query: 59 GKQRGPFVWQVQGISPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSIT---ACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYWYDRN 228
G + F +V+ ++ H A+ C+ + VD ++ Y+ +V IKR+ A GGFV+ GET EEAL RE++EE G N + +RL+GVYS P+RD R HT+S A++ G LKAGDDAK + V+P+ VE + L FDH ILR + ++
Sbjct: 13 GAEVSEFREEVKALAEKHG----LKAELHRCI---GLTVDGVIIYN-------NGIVLIKRKYEPFKDHFALPGGFVEYGETAEEALKREMKEETGLN-VRILRLVGVYSDPNRDPRGHTVSVAFLCIGEGELKAGDDAKEVEVVPID--EVEKLPLAFDHAKILRDALHPKD 168
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|214033217|gb|EEB74045.1| (ADP-ribose pyrophosphatase [Thermococcus sp. AM4]) HSP 1 Score: 100.908 bits (250), Expect = 8.059e-23 Identity = 59/137 (43.07%), Postives = 82/137 (59.85%), Query Frame = 0
Query: 95 VAVDAILEYSETKEGPVTALVFIKRRDRSIT---ACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYWYDRN 228
+ VD ++ Y+ +V IKR+ A GGFV+ GET EEAL RE++EE G N + +RL+GVYS P+RD R HT+S A++ G LKAGDDAK + V+P+ VE + L FDH ILR + ++
Sbjct: 52 LTVDGVIIYN-------NGIVLIKRKYEPFKDHFALPGGFVEYGETAEEALKREMKEETGLN-VRILRLVGVYSDPNRDPRGHTVSVAFLCIGEGELKAGDDAKEVEVVPID--EVEKLPLAFDHAKILRDALHPKD 178
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|506339753|ref|WP_015859472.1| (NUDIX hydrolase [Thermococcus gammatolerans] >gi|239911472|gb|ACS34363.1| ADP-ribose pyrophosphatase (MutT) [Thermococcus gammatolerans EJ3]) HSP 1 Score: 100.138 bits (248), Expect = 1.310e-22 Identity = 64/173 (36.99%), Postives = 96/173 (55.49%), Query Frame = 0
Query: 59 GKQRGPFVWQVQGISPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSIT---ACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSYWYDRN 228
GK F +V+ ++ H A+ C+ + VD ++ Y+ LV IKR++ A GGFV+ GET EEAL RE++EE G + + ++L+GVYS P+RD R HT+S A++ G LKAGDDAK + V+P++ E + L FDH ILR + ++
Sbjct: 13 GKDISEFREEVKSLAEKHG----LKAELHRCI---GLTVDGVIIYN-------NGLVLIKRKNEPFKDHFALPGGFVEYGETVEEALKREMKEETGLD-VRILKLVGVYSDPNRDPRGHTVSVAFLCIGEGELKAGDDAKEVHVVPIE--EAEKLPLAFDHAKILRDALHPKD 168
BLAST of EWM27004.1 vs. NCBI_GenBank
Match: gi|676385629|ref|XP_009036093.1| (hypothetical protein AURANDRAFT_63508 [Aureococcus anophagefferens] >gi|323453089|gb|EGB08961.1| hypothetical protein AURANDRAFT_63508 [Aureococcus anophagefferens]) HSP 1 Score: 106.686 bits (265), Expect = 1.352e-22 Identity = 56/160 (35.00%), Postives = 89/160 (55.62%), Query Frame = 0
Query: 64 PFVWQVQGISPTHKGSCFCSAKDDFCLCGPSVAVDAILEYSETKEGPVTALVFIKRRDRSITACVGGFVQLGETTEEALHREVQEEIGTNTLHSVRLIGVYSHPDRDDRRHTISAAYVGRVYGRLKAGDDAKSISVIPLKVMNVELIKLGFDHGDILRSY 223
P+VW GSC+ + D + +C PS+A+D ++E + +V ++R D A +GGFV +GE +A+ RE++EE + L+GV+ P RD+RRHT+SA YV R G K G DA+++ V+P V +++ + FDH I+ Y
Sbjct: 30 PYVWHGGAPGGEPAGSCW-AGPDGYAMCTPSLAIDLVIESGDD------GVVLVRRGDNGKYATMGGFVDVGELPRDAVARELREETNLELVGEPELLGVFGDPRRDERRHTVSAVYVARTAGEPKVGSDARAVVVVP--VGDLDGLDFAFDHRAIIGDY 180 The following BLAST results are available for this feature:
BLAST of EWM27004.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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