EWM26997.1, cds3664 (CDS) Nannochloropsis gaditana

Overview
NameEWM26997.1
Unique Namecds3664
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:933846..935279 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26997.1
Product4-hydroxy-3-methylbut-2-enyl diphosphate reductase
Orig transcript idgnl|cribi|Naga_100079g5.10186.mrna
GeneIDS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:933846..935279 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
GO:0050992dimethylallyl diphosphate biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:00517454-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR003451LytB/IspH
Homology
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|585109167|gb|EWM26997.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nannochloropsis gaditana])

HSP 1 Score: 996.112 bits (2574), Expect = 0.000e+0
Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0
Query:    1 MSPRSMPVLLVAVLAVLCTASVTAFHTPSSPSAPSIWGAKRGAASAAALTRRHQAAADGEAVENVLSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTLKGQEAPQKDTVNA 477
            MSPRSMPVLLVAVLAVLCTASVTAFHTPSSPSAPSIWGAKRGAASAAALTRRHQAAADGEAVENVLSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTLKGQEAPQKDTVNA
Sbjct:    1 MSPRSMPVLLVAVLAVLCTASVTAFHTPSSPSAPSIWGAKRGAASAAALTRRHQAAADGEAVENVLSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTLKGQEAPQKDTVNA 477          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|551662922|ref|XP_005834226.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia theta CCMP2712] >gi|428178370|gb|EKX47246.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Guillardia theta CCMP2712])

HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0
Identity = 252/401 (62.84%), Postives = 315/401 (78.55%), Query Frame = 0
Query:   66 LSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLM-EEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTLK 465
            L  + ERRRI+ S NF+R+GF    E V+  MV EFTS ++ E+K++    ++ ++ IKLA+S+GFCWGVERAVAMAYEAR+ + + +IHITNEIIHNPGVN RL DM  +F+PV+ G K F  +++ DVV+LPAFGA+++EMQLLD KG +IVDTTCPWV+KVW AV+ HR+ + TSVIHGKW HEE+IATAS AD YII+KD+ EA+YV NYI+NGG+K EFM KFKNA S GFDPD DL+KVG+ANQTTMYK ET AI KLFE+TM+ K+GP  V  H+   DTICDATQERQDAI DL+ ++ +DF LIVGG+DSSNT HL EI HM     +HID A RI  DGSIEHRE DG+I  T +FLP G +T+GVTSGASTPD YLQE++ER+ +L+ L+
Sbjct:   29 LDKRAERRRIVASENFNRRGFGETKEEVQGMMVEEFTSDMVKELKENNNVIERNNVVIKLAESYGFCWGVERAVAMAYEARSFYKDDKIHITNEIIHNPGVNGRLKDMGYNFVPVNGGVKDFSDVKEGDVVVLPAFGASLEEMQLLDSKGCRIVDTTCPWVSKVWNAVDTHRRKDMTSVIHGKWAHEESIATASMADTYIIIKDMEEAKYVTNYILNGGNKEEFMAKFKNACSSGFDPDRDLKKVGIANQTTMYKEETAAIAKLFERTMLKKFGPENVNVHFMALDTICDATQERQDAINDLIRDDSVDFYLIVGGWDSSNTGHLLEIVHMNGKVGYHIDMAHRIREDGSIEHRETDGTITVTKDFLPKGKVTVGVTSGASTPDRYLQESVERVLMLKALE 429          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|299471160|emb|CBN79017.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 546.584 bits (1407), Expect = 0.000e+0
Identity = 267/462 (57.79%), Postives = 344/462 (74.46%), Query Frame = 0
Query:    6 MPVLLVAVLAVLCTASVTAFHTPSSPSAPSIWGAKRGAASAAALTRRHQAAADGEAVENVLSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPV-DEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGG-DKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDG-SIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTL 464
            M   +V  LA+    SV AF  PS P   +    +RGA S  +++          +  +V+  K  RR+I+QS +++R GFK E E V + M  EFTS +I+E K++  +  +GD T KLA+ +GFCWGVERAVAMA++AR HFP++ +HITNE+IHNPGVNE+L +M ++F+PV D+G K  E I+  DVVILPAFGA+++EMQ LD+K VQ+VDTTCPWV+KVW  V+KH K + TSVIHGKW HEET+ATASF D Y++VK++ EAEYV  YI NGG DKAEFMEKFKNA+SEGFDPDVDL KVGLANQTTMYKRETR IGKLFEKT+M KYGPAEV  H+  FDTICDATQERQDAI +L+EE++D +L+VGG+DSSNT HL EI   + IP+F +++A  +  DGSI H +      ++T NFLP G + IGVTSGASTPDAY+++A+E + +L+ L
Sbjct:    1 MKGTVVGTLAM--AGSVAAFLAPSLPRHTNPAQCRRGATSKVSMS----------STADVVDKKAARRKILQSDSYNRVGFKDEKEDVSALMSDEFTSDIISEFKENKGSITRGDTTFKLAEYYGFCWGVERAVAMAFQARKHFPDKTMHITNELIHNPGVNEKLDEMGVNFVPVSDKGGKDLETIDDGDVVILPAFGASLEEMQTLDEKNVQVVDTTCPWVSKVWNTVDKHTKAQFTSVIHGKWAHEETVATASFCDKYLVVKNMAEAEYVAAYIANGGGDKAEFMEKFKNAMSEGFDPDVDLVKVGLANQTTMYKRETRDIGKLFEKTLMEKYGPAEVGEHWMAFDTICDATQERQDAILELVEEEIDLMLVVGGWDSSNTQHLAEISANKGIPTFWVNKANCVKPDGSIAHVDPHSMEELRTENFLPAGEIVIGVTSGASTPDAYMEQAVENISMLKKL 450          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|1210219285|dbj|BAZ38314.1| (hydroxymethylbutenyl pyrophosphate reductase [Calothrix sp. NIES-4101])

HSP 1 Score: 527.709 bits (1358), Expect = 0.000e+0
Identity = 239/397 (60.20%), Postives = 313/397 (78.84%), Query Frame = 0
Query:   66 LSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLR 462
            +  K  +R +  S N+HR+GF  + E V +Q+ SE+ S LI E+++S Y FQ+ ++TI+LA++FGFCWGVERAVAMAYE R HFP ++I ITNEIIHNP VN+RL +M + F+PV +G K F  +E  DVVILPAFGA++QEMQ+L+ KG +IVDTTCPWV+KVW  VEKH+K E TS+IHGK+NHEET+AT+SFA  Y+IV ++H+AEYV NYI+NGGDK EFM KF  A S GFDPD+DLE+VG+ANQTTM K ET  IGKLFE+TMM KYGP E+  H+  F+TICDATQERQDA+ +L+EEK+D ++++GGF+SSNT HL+EI   + IPS+HID  ERI ++  IEHRE+ G +  T N+LP+G + +GVTSGASTPD  ++E IE++F L+
Sbjct:    1 MDTKAFKRSLQHSENYHRRGFGHQEE-VATQLKSEYQSHLIQEIRNSNYNFQRDNVTIRLAQAFGFCWGVERAVAMAYETRQHFPTEQIWITNEIIHNPSVNQRLREMQVKFIPVTDGNKDFSIVESGDVVILPAFGASVQEMQILNDKGCKIVDTTCPWVSKVWNTVEKHKKGEFTSIIHGKYNHEETVATSSFAGKYLIVLNMHQAEYVVNYILNGGDKHEFMAKFAKACSSGFDPDIDLERVGIANQTTMLKGETEEIGKLFERTMMKKYGPQELNQHFQSFNTICDATQERQDAMFELVEEKVDLMIVIGGFNSSNTTHLQEIAVERKIPSYHIDCVERIKSNNMIEHRELTGELKITENWLPEGEIVVGVTSGASTPDKVVEEIIEKIFELK 396          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|428010357|gb|AFY88920.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chroococcidiopsis thermalis PCC 7203])

HSP 1 Score: 525.783 bits (1353), Expect = 0.000e+0
Identity = 238/400 (59.50%), Postives = 306/400 (76.50%), Query Frame = 0
Query:   63 ENVLSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLR 462
            ++ +  K  +R +  S N+HR+GF  E+E V   + SE+ S L+ +++D+ YT Q+GD+TI+LA++FGFCWGVERAVAMAYE R HFP QRI ITNEIIHNP VN+RL +M + F+PV  G K F  +E  DV ILPAFGA++QEMQLL +K  +IVDTTCPWVAKVW  VEKH+K E TS+IHGK+NHEETIAT+SFA+ Y++V ++ +AEYVCNYI+NGG++ EFM KF  A S GF+PD DLEKVG+ANQTTM K ET  IGKLFE+TMM KYGP  +  H+  F+TICDATQERQDA+  L+EEKLD ++++GGF+SSNT HL+EI     IPS+HID A RI     IEHR + G IV T N+LP G +T+G+TSGASTPD  + + +E++F L+
Sbjct:    3 KHCMDTKAFKRSLQHSENYHRKGFGHEAE-VSGMLQSEYQSNLVQQIRDNGYTLQQGDVTIRLAEAFGFCWGVERAVAMAYETRQHFPTQRIWITNEIIHNPSVNQRLQEMQVGFIPVIAGVKDFSVVESGDVAILPAFGASVQEMQLLQEKNCKIVDTTCPWVAKVWNTVEKHKKSEYTSIIHGKYNHEETIATSSFANKYLVVLNMAQAEYVCNYILNGGNRDEFMAKFSRACSAGFNPDTDLEKVGIANQTTMLKSETEQIGKLFERTMMRKYGPDTLNQHFISFNTICDATQERQDAMFQLVEEKLDLMVVIGGFNSSNTTHLQEIAIEHQIPSYHIDSANRIGTANQIEHRLLSGEIVATENWLPSGKITVGITSGASTPDKVVADVVEKIFALK 401          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|1210185376|dbj|BAZ04431.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Calothrix sp. NIES-3974])

HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0
Identity = 241/398 (60.55%), Postives = 313/398 (78.64%), Query Frame = 0
Query:   66 LSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRT 463
            +  K  +R +  S N+HR+GF  ++E V +Q+ SE+ S LI +++D  YT   GD+TI+LA++FGFCWGVERAVAMAYE R HFP ++I ITNEIIHNP VN+RL +M++ F+PV  G+K F  I + DVVILPAFGA++QEMQLL+  G +IVDTTCPWV+KVW  VEKH+K + TS+IHGK+NHEETIAT+SFA  Y+IV ++ +AEYV NYI+NGGDK EFMEKF  A S GFDPDVDLE++G+ANQTTM K ET  IGKLFE+TMM KYGP  +  H+  F+TICDATQERQDA+ +L+E+KLD +L+VGGF+SSNTAHL+EI   + IPS+HID  ERI ++  IEHR +DGS+  T N+LP G +T+GVTSGASTPD  +++AI ++  L++
Sbjct:    1 MDTKAFKRSLQHSENYHRRGFGHQAE-VATQLQSEYQSGLIQQIRDRNYTLTIGDVTIRLAEAFGFCWGVERAVAMAYETRKHFPTEQIWITNEIIHNPSVNQRLREMDVKFIPVQAGEKDFSGISQGDVVILPAFGASVQEMQLLNDLGCKIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYNHEETIATSSFAGKYLIVLNMAQAEYVANYILNGGDKGEFMEKFGKACSTGFDPDVDLERLGIANQTTMLKGETELIGKLFERTMMQKYGPQSINEHFQSFNTICDATQERQDAMFELVEQKLDLMLVVGGFNSSNTAHLQEIAEEKGIPSYHIDSVERIKSERQIEHRLLDGSLHITENWLPSGKITLGVTSGASTPDKVVEDAIAKILELKS 397          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|752824317|ref|WP_041462512.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chroococcidiopsis thermalis])

HSP 1 Score: 525.013 bits (1351), Expect = 0.000e+0
Identity = 238/397 (59.95%), Postives = 304/397 (76.57%), Query Frame = 0
Query:   66 LSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLR 462
            +  K  +R +  S N+HR+GF  E+E V   + SE+ S L+ +++D+ YT Q+GD+TI+LA++FGFCWGVERAVAMAYE R HFP QRI ITNEIIHNP VN+RL +M + F+PV  G K F  +E  DV ILPAFGA++QEMQLL +K  +IVDTTCPWVAKVW  VEKH+K E TS+IHGK+NHEETIAT+SFA+ Y++V ++ +AEYVCNYI+NGG++ EFM KF  A S GF+PD DLEKVG+ANQTTM K ET  IGKLFE+TMM KYGP  +  H+  F+TICDATQERQDA+  L+EEKLD ++++GGF+SSNT HL+EI     IPS+HID A RI     IEHR + G IV T N+LP G +T+G+TSGASTPD  + + +E++F L+
Sbjct:    1 MDTKAFKRSLQHSENYHRKGFGHEAE-VSGMLQSEYQSNLVQQIRDNGYTLQQGDVTIRLAEAFGFCWGVERAVAMAYETRQHFPTQRIWITNEIIHNPSVNQRLQEMQVGFIPVIAGVKDFSVVESGDVAILPAFGASVQEMQLLQEKNCKIVDTTCPWVAKVWNTVEKHKKSEYTSIIHGKYNHEETIATSSFANKYLVVLNMAQAEYVCNYILNGGNRDEFMAKFSRACSAGFNPDTDLEKVGIANQTTMLKSETEQIGKLFERTMMRKYGPDTLNQHFISFNTICDATQERQDAMFQLVEEKLDLMVVIGGFNSSNTTHLQEIAIEHQIPSYHIDSANRIGTANQIEHRLLSGEIVATENWLPSGKITVGITSGASTPDKVVADVVEKIFALK 396          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|1121334674|ref|WP_073642573.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc calcicola] >gi|1115268723|gb|OKH32212.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Nostoc calcicola FACHB-389])

HSP 1 Score: 523.857 bits (1348), Expect = 0.000e+0
Identity = 231/397 (58.19%), Postives = 316/397 (79.60%), Query Frame = 0
Query:   66 LSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLR 462
            +  K  +R +  S N++R+GF  ++E V SQ+ SE+ S LI E++D  YT Q+G++TI+LA++FGFCWGVERAVAMAYE R HFP +RI ITNEIIHNP VN+R+ +M + F+PV+  +K F  ++  DVVILPAFGA++QEMQ+L +KG +IVDTTCPWV+KVW  VEKH+K++ TS+IHGK+ HEET+AT+SFAD Y+IV ++ EAEYV NYI+NGG++ EF++KF  A S GFDPD DLE+VG+ANQTTM K ET  IGKLFE+TM+ KYGP E+  H+  F+TICDATQERQDA+ +L+E+KLD ++++GGF+SSNT  L++I   + IPS+HID  ERI +  SIEHR+++G ++ T N+LPDG + +G+TSGASTPD  +++AIE++F L+
Sbjct:    1 MDTKAFKRTLQHSENYNRKGFGHQAE-VTSQLQSEYQSNLIQEIRDRNYTLQRGNVTIRLAQAFGFCWGVERAVAMAYETRQHFPTERIWITNEIIHNPSVNQRMQEMEVKFIPVEASQKDFSVVDIGDVVILPAFGASVQEMQILHEKGCKIVDTTCPWVSKVWNTVEKHKKVDYTSIIHGKYKHEETVATSSFADKYLIVLNLSEAEYVANYIINGGNREEFLKKFAKACSSGFDPDRDLERVGIANQTTMLKGETEQIGKLFERTMLQKYGPTELNQHFQSFNTICDATQERQDAMLELVEDKLDLMVVIGGFNSSNTTQLQQIAIEKKIPSYHIDTVERIQSANSIEHRQLNGQLIITENWLPDGEIVVGITSGASTPDKVVEDAIEKIFALK 396          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|971072992|ref|WP_058883179.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Oscillatoriales cyanobacterium MTP1])

HSP 1 Score: 521.931 bits (1343), Expect = 0.000e+0
Identity = 238/399 (59.65%), Postives = 308/399 (77.19%), Query Frame = 0
Query:   66 LSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLRTL 464
            +  K  +R +  S N+HR+GF  E E V  QM SE+ S LI E++++ YT  +GD+TI+LA++FGFCWGVERAVAMAYE R HFP +R+ ITNEIIHNP VN+RL +M ++F+PV  G+K F  + + DVVILPAFGA++QEMQLL+ KG  IVDTTCPWV+KVW  VEKH+K   TS+IHGK+NHEETIAT+SFA  Y+IV ++ +AEYVCNYI+NGGDKAEFM KF  A S GFDPD DLE+VG+ANQTTM K ET  IGKLFE+TMM KYGP ++  H+  F+TICDATQERQDA+ +L+EE+LD +++VGG++SSNT HL+EI   + IPS+HID  +RI     IEH+ +   +V T N+LP GP+ +GVTSGASTPD  +   IE++F L+++
Sbjct:    1 MDTKAFKRSLNSSENYHRKGFGHE-EAVSGQMQSEYQSDLIQEIRNNNYTLTRGDVTIRLAQAFGFCWGVERAVAMAYETRQHFPNERLWITNEIIHNPSVNQRLREMEVNFIPVRAGQKDFSVVGQGDVVILPAFGASVQEMQLLNDKGCTIVDTTCPWVSKVWNTVEKHKKTHHTSIIHGKYNHEETIATSSFAGTYLIVLNLEQAEYVCNYILNGGDKAEFMAKFSRACSTGFDPDRDLERVGIANQTTMLKSETEQIGKLFERTMMRKYGPDKLNEHFLAFNTICDATQERQDAMFELVEEQLDLMVVVGGYNSSNTTHLQEIAIERGIPSYHIDSGDRIGPGNRIEHKPLHHDLVVTENWLPPGPIIVGVTSGASTPDKVVATVIEKIFALKSV 398          
BLAST of EWM26997.1 vs. NCBI_GenBank
Match: gi|1121220459|ref|WP_073547899.1| (4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chroogloeocystis siderophila] >gi|1115265088|gb|OKH28742.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Chroogloeocystis siderophila 5.2 s.c.1])

HSP 1 Score: 521.546 bits (1342), Expect = 0.000e+0
Identity = 234/397 (58.94%), Postives = 310/397 (78.09%), Query Frame = 0
Query:   66 LSPKQERRRIIQSPNFHRQGFKAESEGVESQMVSEFTSQLINEMKDSTYTFQKGDLTIKLAKSFGFCWGVERAVAMAYEARAHFPEQRIHITNEIIHNPGVNERLADMNIDFLPVDEGKKQFEHIEKDDVVILPAFGATIQEMQLLDKKGVQIVDTTCPWVAKVWTAVEKHRKLESTSVIHGKWNHEETIATASFADVYIIVKDIHEAEYVCNYIVNGGDKAEFMEKFKNAVSEGFDPDVDLEKVGLANQTTMYKRETRAIGKLFEKTMMHKYGPAEVKNHYAEFDTICDATQERQDAITDLMEEKLDFILIVGGFDSSNTAHLKEIPHMQHIPSFHIDRAERISADGSIEHREIDGSIVKTANFLPDGPLTIGVTSGASTPDAYLQEAIERLFLLR 462
            +  K  +R +  S N+HR+GF  ++E V +Q+ SE+ S L+ E++D+ YT Q+GD+TI LAK+FGFCWGVERAVAMAYE R HFP++RI ITNEIIHNP VN+RL +M + F+PV+ GKK F  +E  DVVILPAFGA++QEMQLL+ K   IVDTTCPWV+KVW  VEKH+K E TS+IHGK+NHEET+AT+SFA  Y+IV ++ +AEYV NYI+NGGDK EF+ KF  A S GFDP+ DLE+VG+ANQTTM K ET  IGKLFE+TM+ KYGP E+ +H+  F+TICDATQERQDA+ +L+EEKLD I+++GGF+SSNT HL+EI   + IPS+HID  +RI     +EHR++ G +  T N+LP+G + IG+TSGASTPD  + + ++++F ++
Sbjct:    1 MDTKAFKRSLQHSENYHRKGFGHQAE-VATQLQSEYQSNLVQEIRDNNYTLQQGDVTIYLAKAFGFCWGVERAVAMAYETRQHFPQERIWITNEIIHNPSVNQRLREMQVGFIPVENGKKDFSIVESGDVVILPAFGASVQEMQLLNDKSCTIVDTTCPWVSKVWNTVEKHKKGEYTSIIHGKYNHEETLATSSFAGKYLIVLNLAQAEYVANYILNGGDKNEFLAKFSRACSTGFDPERDLERVGIANQTTMLKSETEQIGKLFERTMLQKYGPIELNDHFQSFNTICDATQERQDAMFELVEEKLDLIVVIGGFNSSNTTHLQEIAVEREIPSYHIDSNDRIGPGNRVEHRQLSGDLAVTENWLPEGAIAIGITSGASTPDKVVADVVQKIFDIK 396          
The following BLAST results are available for this feature:
BLAST of EWM26997.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109167|gb|EWM26997.1|0.000e+0100.004-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|551662922|ref|XP_005834226.1|0.000e+062.844-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|299471160|emb|CBN79017.1|0.000e+057.794-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|1210219285|dbj|BAZ38314.1|0.000e+060.20hydroxymethylbutenyl pyrophosphate reductase [Calo... [more]
gi|428010357|gb|AFY88920.1|0.000e+059.504-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|1210185376|dbj|BAZ04431.1|0.000e+060.554-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|752824317|ref|WP_041462512.1|0.000e+059.954-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|1121334674|ref|WP_073642573.1|0.000e+058.194-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|971072992|ref|WP_058883179.1|0.000e+059.654-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
gi|1121220459|ref|WP_073547899.1|0.000e+058.944-hydroxy-3-methylbut-2-enyl diphosphate reductase... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3673rna3673Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications