EWM26999.1, cds3663 (CDS) Nannochloropsis gaditana

Overview
NameEWM26999.1
Unique Namecds3663
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:930939..931508 +
Alignment locationCM002461.1:931684..932463 +
Alignment locationCM002461.1:932651..932692 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26999.1
Productatp-binding cassette sub-family b member mitochondrial
Orig transcript idgnl|cribi|Naga_100079g4.10188.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:930939..931508 +
CM002461.1supercontigCM002461.1:931684..932463 +
CM002461.1supercontigCM002461.1:932651..932692 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
Homology
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|585109169|gb|EWM26999.1| (atp-binding cassette sub-family b member mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 946.036 bits (2444), Expect = 0.000e+0
Identity = 463/463 (100.00%), Postives = 463/463 (100.00%), Query Frame = 0
Query:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMDRADAERARLPSF 463
            MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMDRADAERARLPSF
Sbjct:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMDRADAERARLPSF 463          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|585109170|gb|EWM27000.1| (atp-binding cassette sub-family b member mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 919.072 bits (2374), Expect = 0.000e+0
Identity = 450/450 (100.00%), Postives = 450/450 (100.00%), Query Frame = 0
Query:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLM 450
            MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLM
Sbjct:    1 MWHPGLAGCCIRQNFPGVLRRSTRWPPQMHVLKACLVTNATRQHRPFRRQSLLFLNGWRQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLM 450          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|929764779|ref|XP_014157370.1| (hypothetical protein SARC_04277 [Sphaeroforma arctica JP610] >gi|906954483|gb|KNC83468.1| hypothetical protein SARC_04277 [Sphaeroforma arctica JP610])

HSP 1 Score: 265.774 bits (678), Expect = 7.452e-77
Identity = 147/374 (39.30%), Postives = 223/374 (59.63%), Query Frame = 0
Query:   76 TEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNL 449
            T  + V L E+  +L  E K  ++A+ G+G ++A  +  P   G++VD+L+     +T A          ++E  + M+G+   G  AT+   + L++VGQ+I  +LRK+L+G I+ QD AFFDVN+SGEL NRL  DVHE AEHLVEN+  F  +++ + ++ G ++YISP L+  +  VVP I  GA  + K +K+LS   L++LA STQ AAE+   IR V     +  E   YG++ID S   A+RLA  +G+++   F + N  LL V+ LG   V+   L+VG L ++CLYA  LS ++ + T+  +G++RAQG+A RL+ LLE +P +  G     AE   G I F  V FAYPT P + ++E  +L
Sbjct:  239 TRGKQVKLTEVLSILKSEYKLMSLAMVGLGASTAATIAFPDALGTIVDVLAEPTTVDTYAR---------IKEITLNMVGIITVGAGATFLHATLLEMVGQKIGASLRKKLYGGIMAQDAAFFDVNRSGELVNRLGIDVHETAEHLVENVGSFTESAMKSASAVGAMVYISPLLTFYSAGVVPMIIGGALFFGKYIKRLSRKHLDALATSTQMAAERFGAIRTVVLCDQQQVEAREYGKVIDMSYLYAERLAYYQGLFLGCSFFIGNGVLLTVVGLGGNMVINNTLSVGQLTAFCLYAGMLSGSVSEVTESASGILRAQGSASRLFQLLEAKPKLGYGT-KKLAEGYNGNIRFNGVGFAYPTAPDAQIIEKLDL 602          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|224011459|ref|XP_002295504.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|209583535|gb|ACI64221.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 237.269 bits (604), Expect = 4.969e-68
Identity = 133/369 (36.04%), Postives = 209/369 (56.64%), Query Frame = 0
Query:   89 LLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGA------------IIPPAEAIRGCIEFRDVTFAYPTRPASPVLE 445
            +LL E K+  +AL  + +++A  +  P   G ++D+LS  +       H     L  +   A+ M+     G   T+  ++  D +GQRI  +LRK+LF  I+ QD  FFD N++GELANRLSTDVHEVAEHLV+NI+ FL   V +  +   ++ +SP L++    VVP + + A  +   +K+ S   L+ LA ST  A E+ AGI  V  F  + +E +RY ++I  +   A+R+AV +G ++   + V N ALLGVL++G G VL+G +T G LA +C+YA  L++ + + ++ V G ++AQG+  RL+ALL+   + ++G             I+PP       I F DV F+YP+ P   +L 
Sbjct:    5 ILLPETKSLLIALGALTISTAATMQFPNAIGQMIDILSG-IPAMPQIQHEQQ--LEQMNRIALQMISFFTIGAVGTFIHSALFDSIGQRIGASLRKQLFTTIIHQDQTFFDQNRAGELANRLSTDVHEVAEHLVQNIAVFLSNVVRSLTAILSMIALSPVLTMYLSPVVPLLGVCAMGFGGAIKRFSKQHLDVLAHSTHVATERFAGIATVMSFGQKGKEVDRYSEVIQAAYEYARRVAVFQGAFLGTSYMVGNAALLGVLWIGGGYVLDGEMTAGQLAGFCMYAGHLADGVFEISESVGGFLKAQGSGARLFALLDKDSITEKGTNATPFGNGESSLILPP--NYNPTIRFEDVQFSYPSHPNVDILH 368          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|929754292|ref|XP_014152128.1| (hypothetical protein SARC_09338 [Sphaeroforma arctica JP610] >gi|906946643|gb|KNC78226.1| hypothetical protein SARC_09338 [Sphaeroforma arctica JP610])

HSP 1 Score: 231.106 bits (588), Expect = 7.760e-65
Identity = 142/377 (37.67%), Postives = 210/377 (55.70%), Query Frame = 0
Query:   81 VSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQ--------RGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNL 449
            VS++ +  LL  E     VA+  + V+S   L  P   G VVD +SAT   N D     TA     Q+  +AMLGV   G+ A     SQL+IV ++++  LRK +F  ++ Q L FF+ N++G L NRLSTD   VA  L +N+++ + A      S G LL ISP L+ +TL V+P   + A  Y +  KKL+  LL   AK  Q + E++ GIR V  F AE  E ERY + +D S GLAK +  +EG ++A  FAV+   LLGVL+ G   +++  L+VG L S+C+Y   L  ++   +  ++  ++AQGAA R++++++T  L +         GAI+P        IE ++V FAYPTRP   VL+  +L
Sbjct:  116 VSMRTLFELLRPETNRMAVAMGAVLVSSLASLAFPSAVGQVVDSVSAT---NPDGPSFETA-----QQIILAMLGVVGVGSTAVAVRVSQLNIVSEQVARTLRKNVFECMVYQKLRFFEENETGRLVNRLSTDTSMVASTLTDNVARCIKAGTAVFTSTGFLLSISPQLTGVTLLVLPVFGVAAYTYGEYRKKLAQILLTRYAKENQVSMERLQGIRTVHSFTAEPAEVERYKRAVDRSFGLAKTVGYAEGAFLAGGFAVAQCTLLGVLYYGGSLMVQDALSVGQLTSFCMYTGYLFVSVGQVSVAMSEFLKAQGAARRVFSVIDTSNLNRHIYPMKDPEGAIMPDMTNFSPDIELKNVNFAYPTRPDIQVLKNVSL 484          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|1022777636|gb|KZS21162.1| (ABC transporter [Daphnia magna])

HSP 1 Score: 218.779 bits (556), Expect = 1.583e-60
Identity = 123/368 (33.42%), Postives = 210/368 (57.07%), Query Frame = 0
Query:   83 LKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQ-RGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNL 449
            L+ +  L   EK   T  +  + V+SA  + IP+  G V+D++    G N +++  N      L   ++ ++G+ + G A  +  T  + + GQRI+  LR+ ++  I+ Q++AFFD NK+GEL NRLS D   V++ +  NIS  + +S +  A   M+ Y+SP L+++ LS+VP +A  A  Y + V+K+S ++ ++LA++TQ A E++A +R VR F  E RE  RY + I+  L L  + A ++G++ A      N  ++ VL+ G   V E  LT G L+++ LYA  ++ ++   +   + +++  GA+ RL+ L++ RP +   G  + PA    G I FRD++FAYPTR  +P+    NL
Sbjct:   79 LRRLVGLAKSEKYRLTGGIGLLFVSSAITMAIPFALGKVIDII---YGANQESMVEN------LTNVSLILVGIFIFGAACNFGRTYLMGVSGQRITQALRRNVYAAIIKQEVAFFDKNKTGELINRLSADTSLVSQCVTSNISDGIRSSALVVAGVSMMFYMSPQLALVGLSIVPPVAGMAILYGRFVRKISKNVQDALAQATQVAEERIANVRTVRAFGQENREFARYDERIEHVLELGYKEAKAKGIFFALTGLSGNAIIISVLYYGGLMVTESSLTAGQLSAFLLYAAYVTISLSGLSSCYSEMMKGLGASTRLWQLIDKRPDIPISGGSVIPAGQFEGSIRFRDLSFAYPTRSDAPIFNNLNL 437          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|321454536|gb|EFX65703.1| (ABC transporter [Daphnia pulex])

HSP 1 Score: 218.009 bits (554), Expect = 3.432e-60
Identity = 130/398 (32.66%), Postives = 218/398 (54.77%), Query Frame = 0
Query:   58 WRQFRVTPAVTRLDVGKPTEQRPVSLK--EMGHLLLQEKKTFTVALAGIG---VASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQ-RGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNL 449
            WR F  T A+ R    K  E+    LK  E+  L+   K      L GIG   V+SA  + IP+  G V+D++SA    N +++  N      L   ++ ++G+ + G A  +  T  + + G+RI+  +R+ ++  I+ QD+ FFD N++GEL NRLSTD   V++ +  N++  + +S +  ++  M+ Y SP ++++ LS+VP +A     Y + VKK++  + ++LA++TQ   E+++ IR VR F  E RE ERY + ID  L L  + A + G + A      N  ++  L+ G   V +  LTVG L+++ LYA  +  +M   +   + +++  GA+ R++ L++TRP +   G  + PA    G I FRD++FAYPTR   P+    NL
Sbjct:   49 WRFFSSTSALLRNSGLKTAEKVKPKLKSEEVRRLIGLAKPEKYRLLGGIGLLFVSSAITMVIPFAIGKVIDIISA----NQESMVEN------LTNVSLILVGIFIFGAACNFGRTYLMSVAGERITQTMRRNVYAAIVKQDVKFFDKNQTGELVNRLSTDTTLVSKCVTANLADGIRSSALVVSAISMMFYTSPQIALVGLSIVPPVAGLTIVYGRFVKKITKKVQDALAQATQVTEERISNIRTVRAFGQEKREFERYNEQIDHVLTLGYKEAKARGTFFALTGFAGNAIIISGLYYGGLMVADSSLTVGQLSAFLLYAAYVGISMGGLSSSYSEMMKGLGASTRIWQLIDTRPDIPISGGPVIPAGQFEGSIRFRDLSFAYPTRSDVPIFNNLNL 436          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|684054233|gb|AIN44099.1| (ATP-binding cassette sub-family B member 10 [Laodelphax striatella])

HSP 1 Score: 218.779 bits (556), Expect = 3.828e-60
Identity = 135/419 (32.22%), Postives = 227/419 (54.18%), Query Frame = 0
Query:   36 LVTNATRQHRPFRRQSLLFLNGW--RQFRVTPAVTRLDVGKPTEQRPVSLKEMGHLL---LQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNL 449
            L  N +R H        LF N       R   + T LD     ++  ++ +EM  LL    +EK   T  +  + ++SA  + +P+  G V+DL+  T   +   +  N   LS L      + GV L G    +     +++ G RI+ +LR+++F +I+ QD+AFFD NK+GEL NRLS D   V++ +  NIS  L ++VMA A   M+ Y+S  L+++ L +VP +A  A  Y + V+ ++ S+  +LA+STQ A E+++ IR V+ F+ E +E + Y + +D+ L L+ R +++ G +        N  +L VL+ G   V +   TVG L+++  YA  +  ++   +   A + +  GA+ RL+ L++  P +Q    I P+E +RG I+F+++TF+YP RP S +L  FNL
Sbjct:   68 LQQNTSRLHGSVANSCYLFSNRLLVHPRRYVSSRTVLDAAAKPQKISLAGREMKRLLSLAKREKWNLTSGIFLLLISSAITMSVPFALGKVIDLIYTT---DVVKMKENLLKLSIL------LFGVFLVGALCNFGRVYLMNVSGHRITRDLREKVFRSIMKQDIAFFDSNKTGELINRLSADTALVSQCVTMNISDGLRSTVMACAGVSMMFYMSTELALVGLGIVPPVAALAIVYGRFVRNITKSVQEALAESTQVAEERISNIRTVKAFSQEKKEIQAYSEKMDKVLNLSIRESLARGGFFGMTGFSGNVIILTVLYYGVSMVAKQEFTVGNLSAFLWYAAYVGVSLGGLSSFYAEMNKGLGASTRLWELIDQVPGIQDSGGIIPSEPLRGDIKFKNITFSYPNRPESRILNDFNL 477          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|701406535|ref|XP_009970207.1| (PREDICTED: ATP-binding cassette sub-family B member 10, mitochondrial, partial [Tyto alba])

HSP 1 Score: 211.846 bits (538), Expect = 7.285e-60
Identity = 126/362 (34.81%), Postives = 199/362 (54.97%), Query Frame = 0
Query:   90 LLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVGEN-TDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRP-LMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNL 449
            +L  +  F  A+  + V+S   +  P+  G V+D++     E+ TD+L S  A+LSG          + L G AA       +   GQRI  +LR  +F +IL Q+ AFFD  ++GEL NRLS+D   +   + EN+S  L A   A+   GM+ ++SPSL+   LSVVP +A+ A  Y + ++KL+    +SLA++TQ A E++  IR VR F  E+ E E+Y   +D  L LAK+ A++   +  A     N  +L VL+ G   +    +TVG L+S+ +YA  +  ++   +   + +++  GA GRL+ L+E +P L     I    +  RG +EF+DV FAYPTRP + + + F+L
Sbjct:   38 VLGSRNFFAAAVGFLTVSSVITMSAPFFLGKVIDVIYTNSSEDFTDSLTSLCALLSG----------IFLCGAAANATRVYLMQTAGQRIVKHLRTTMFSSILKQETAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVGMMFFVSPSLAAFVLSVVPPLAVLAVIYGRYLRKLTKMTQDSLAEATQLAEERIGNIRTVRAFGQEVAEIEKYTNKVDYVLQLAKKEALARAGFFGATGLSGNLIILSVLYKGGLLMGSAYMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELIERKPQLPFNEGITLGKDTFRGALEFKDVEFAYPTRPETSIFKDFSL 389          
BLAST of EWM26999.1 vs. NCBI_GenBank
Match: gi|678189838|gb|KFV57532.1| (hypothetical protein N341_03809, partial [Tyto alba])

HSP 1 Score: 208.764 bits (530), Expect = 3.677e-59
Identity = 124/352 (35.23%), Postives = 195/352 (55.40%), Query Frame = 0
Query:  100 ALAGIGVASACQLCIPYIFGSVVDLLSATVGEN-TDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRP-LMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNL 449
            A+  + V+S   +  P+  G V+D++     E+ TD+L S  A+LSG          + L G AA       +   GQRI  +LR  +F +IL Q+ AFFD  ++GEL NRLS+D   +   + EN+S  L A   A+   GM+ ++SPSL+   LSVVP +A+ A  Y + ++KL+    +SLA++TQ A E++  IR VR F  E+ E E+Y   +D  L LAK+ A++   +  A     N  +L VL+ G   +    +TVG L+S+ +YA  +  ++   +   + +++  GA GRL+ L+E +P L     I    +  RG +EF+DV FAYPTRP + + + F+L
Sbjct:    3 AVGFLTVSSVITMSAPFFLGKVIDVIYTNSSEDFTDSLTSLCALLSG----------IFLCGAAANATRVYLMQTAGQRIVKHLRTTMFSSILKQETAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVGMMFFVSPSLAAFVLSVVPPLAVLAVIYGRYLRKLTKMTQDSLAEATQLAEERIGNIRTVRAFGQEVAEIEKYTNKVDYVLQLAKKEALARAGFFGATGLSGNLIILSVLYKGGLLMGSAYMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELIERKPQLPFNEGITLGKDTFRGALEFKDVEFAYPTRPETSIFKDFSL 344          
The following BLAST results are available for this feature:
BLAST of EWM26999.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109169|gb|EWM26999.1|0.000e+0100.00atp-binding cassette sub-family b member mitochond... [more]
gi|585109170|gb|EWM27000.1|0.000e+0100.00atp-binding cassette sub-family b member mitochond... [more]
gi|929764779|ref|XP_014157370.1|7.452e-7739.30hypothetical protein SARC_04277 [Sphaeroforma arct... [more]
gi|224011459|ref|XP_002295504.1|4.969e-6836.04predicted protein, partial [Thalassiosira pseudona... [more]
gi|929754292|ref|XP_014152128.1|7.760e-6537.67hypothetical protein SARC_09338 [Sphaeroforma arct... [more]
gi|1022777636|gb|KZS21162.1|1.583e-6033.42ABC transporter [Daphnia magna][more]
gi|321454536|gb|EFX65703.1|3.432e-6032.66ABC transporter [Daphnia pulex][more]
gi|684054233|gb|AIN44099.1|3.828e-6032.22ATP-binding cassette sub-family B member 10 [Laode... [more]
gi|701406535|ref|XP_009970207.1|7.285e-6034.81PREDICTED: ATP-binding cassette sub-family B membe... [more]
gi|678189838|gb|KFV57532.1|3.677e-5935.23hypothetical protein N341_03809, partial [Tyto alb... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3672rna3672Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications