EWM27022.1, cds3650 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|585109193|gb|EWM27021.1| (protein phosphatase 1a isoform 2 [Nannochloropsis gaditana]) HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query: 1 MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 261
MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK
Sbjct: 75 MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 335
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|585109194|gb|EWM27022.1| (protein phosphatase 1a isoform 2 [Nannochloropsis gaditana]) HSP 1 Score: 538.11 bits (1385), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query: 1 MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 261
MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK
Sbjct: 1 MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESNDGGKASERGKEEK 261
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|299471855|emb|CBN77025.1| (protein phosphatase, putative [Ectocarpus siliculosus]) HSP 1 Score: 209.534 bits (532), Expect = 8.312e-63 Identity = 115/250 (46.00%), Postives = 161/250 (64.40%), Query Frame = 0
Query: 1 MVDFVRRTVAYTEYKKT--KDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDRNLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEEEESN 248
M+ V T + EY ++ KD L+ A+++AFL D S+K + + D SG TA+ + +TP+HVV+A+AGDSRAV+ + + + DHKPY + ER RIE AGG+VSM+RVDGDLA+SR+LGDFQ+KD LPPE KV+ PE + R P+ + L++ACDG+WDV + + V +I +GE M L EE+LD S+DNMSAV+V F L + + G+GV GRR +R A E+ ESN
Sbjct: 75 MMRHVMETAEFAEYAESTEKDTTVLEKALYAAFLACDRSVKASQDANPEGDRSGSTAVASFVTPTHVVLAHAGDSRAVLASGQKVAVATADHKPYNDGERARIEKAGGVVSMKRVDGDLAVSRALGDFQYKDDALPPEECKVSPAPETRSFPRSPQDEF-LVVACDGIWDVMSDEDCTQAVREIFVEGESSMGLACEEILDMG----SRDNMSAVLVAFPGL--KRSETGKGVAGRRAQR--AAEDSESN 315
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|1173954910|gb|OQS02034.1| (phosphatase 2C [Thraustotheca clavata]) HSP 1 Score: 197.593 bits (501), Expect = 2.611e-58 Identity = 110/235 (46.81%), Postives = 145/235 (61.70%), Query Frame = 0
Query: 11 YTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGFAKLWEEHGKEGEGVEGRRRRRLPAGEE 244
+ K KD + A+ AFL LDE + + V D SGCTAI A +TP+H++VAN+GDSR+V+ T +S DHKP E ER RIE+AGG V RV+GDLA+SR+LGDF +K R +L PE Q+V+A P+++ R E + L+LACDG+WDV + +A V ++ GE M L+ EELLD CL S+DNMS V+V FA GEGV G R+ R A EE
Sbjct: 81 HNNVGKEKDPNEIGKAMGKAFLELDEKHRALTQIVSGEDHSGCTAIAAFVTPTHIIVANSGDSRSVLSTGGTVVPMSFDHKPNNEKERMRIENAGGSVRNNRVNGDLAVSRALGDFVYKQRSDLKPEEQQVSAEPDIKTQHRSKEDEF-LILACDGIWDVMTNDDACDFVRSLMNKGESNMGLICEELLDHCLQLGSRDNMSVVIVKFAG---AKIGTGEGVMGLRKAREKAIEE 311
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|953503746|emb|CEG35312.1| (protein phosphatase [Plasmopara halstedii]) HSP 1 Score: 197.978 bits (502), Expect = 3.284e-58 Identity = 108/236 (45.76%), Postives = 154/236 (65.25%), Query Frame = 0
Query: 19 DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEEESND 249
D + A+ AF+NLD++++ + + D SGCTAI A++TP+H++VAN+GDSR+VM T ++S DHKP +ERKRIE AGG+V RV+GDLA+SR+LGDF +K R +LP E+Q+V+A PE+QV + ++ L+LACDG+WDV + E + ++ DGE + L+AEE+LD CL S+DNMS V+V F AK +G GV R R RL E+ +S D
Sbjct: 97 DPKKIGKAMRDAFMNLDQNIRKTFDENYASDQSGCTAITALVTPTHIIVANSGDSRSVMAKGGRTVEMSFDHKPINAEERKRIEQAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEKQQVSAEPEIQVQKIEKTEEF-LVLACDGIWDVMSNDEICAYIRQLMNDGEMDLKLIAEEILDNCLRAGSRDNMSVVIVKFPGAKF-----GQGGGVSKIREERARLEMAEQNKSGD 326
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|301105313|ref|XP_002901740.1| (protein phosphatase 2C, putative [Phytophthora infestans T30-4] >gi|262099078|gb|EEY57130.1| protein phosphatase 2C, putative [Phytophthora infestans T30-4]) HSP 1 Score: 195.667 bits (496), Expect = 2.612e-57 Identity = 106/234 (45.30%), Postives = 154/234 (65.81%), Query Frame = 0
Query: 19 DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRRRRRLPAGEEEESND 249
D A + A+ AF+NLD++++ + + D SGCTAI A++TP+H++VAN+GDSR+VM T ++S DHKP ERKRI+ AGG+V RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V D ++ L+LACDG+WDV + E V ++ +GE + L+AEE+LD CL S+DNMSAV+V F AKL G G + R R E+++ND
Sbjct: 97 DPAKIGKAMRDAFMNLDQNIRKTFDESYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKNGRTVEMSFDHKPINAGERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDEICAFVRQLMSNGETDLKLIAEEILDNCLRAGSRDNMSAVIVKFPGAKL----GSGGGVAKIREERARLEKAEQDTND 325
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|675165751|ref|XP_008891760.1| (hypothetical protein PPTG_02437 [Phytophthora parasitica INRA-310] >gi|566027124|gb|ETI50035.1| hypothetical protein F443_06319 [Phytophthora parasitica P1569] >gi|567964436|gb|ETK89922.1| hypothetical protein L915_06193 [Phytophthora parasitica] >gi|567993137|gb|ETL43320.1| hypothetical protein L916_06131 [Phytophthora parasitica] >gi|568107889|gb|ETN22513.1| hypothetical protein PPTG_02437 [Phytophthora parasitica INRA-310] >gi|570330831|gb|ETO78779.1| hypothetical protein F444_06382 [Phytophthora parasitica P1976] >gi|570954546|gb|ETP19803.1| hypothetical protein F441_06327 [Phytophthora parasitica CJ01A1] >gi|570989557|gb|ETP47760.1| hypothetical protein F442_06362 [Phytophthora parasitica P10297] >gi|970636074|gb|KUF80808.1| phosphatase 1A protein [Phytophthora nicotianae]) HSP 1 Score: 193.741 bits (491), Expect = 1.463e-56 Identity = 106/232 (45.69%), Postives = 152/232 (65.52%), Query Frame = 0
Query: 19 DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEE 245
D A + A+ AF+NLD++++ + + D SGCTAI A++TP+H++VAN+GDSR+VM T ++S DHKP ERKRI+ AGG+V RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V D ++ L+LACDG+WDV + E + ++ +GE + L+AEE+LD CL S+DNMS V+V F AKL G GV R R RL E+E
Sbjct: 97 DPAKIGKAMRDAFMNLDQNIRKTFDESYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKNGRTVEMSFDHKPINAGERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDELCAYIRQLMNNGESDLKLIAEEVLDNCLRAGSRDNMSVVIVKFPGAKL-----GSGGGVAKIREERARLEKAEQE 322
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|568022442|gb|ETL96512.1| (hypothetical protein L917_06009 [Phytophthora parasitica] >gi|568052805|gb|ETM49668.1| hypothetical protein L914_06129 [Phytophthora parasitica]) HSP 1 Score: 193.356 bits (490), Expect = 1.479e-56 Identity = 106/232 (45.69%), Postives = 152/232 (65.52%), Query Frame = 0
Query: 19 DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEE 245
D A + A+ AF+NLD++++ + + D SGCTAI A++TP+H++VAN+GDSR+VM T ++S DHKP ERKRI+ AGG+V RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V D ++ L+LACDG+WDV + E + ++ +GE + L+AEE+LD CL S+DNMS V+V F AKL G GV R R RL E+E
Sbjct: 97 DPAKIGKAMRDAFMNLDQNIRKTFDESYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKNGRTVEMSFDHKPINAGERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDELCAYIRQLMNNGESDLKLIAEEVLDNCLRAGSRDNMSVVIVKFPGAKL-----GSGGGVAKIREERARLEKAEQE 322
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|1214712845|gb|OWZ23765.1| (Protein phosphatase 2C [Phytophthora megakarya]) HSP 1 Score: 192.971 bits (489), Expect = 2.453e-56 Identity = 107/236 (45.34%), Postives = 155/236 (65.68%), Query Frame = 0
Query: 19 DVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTTKGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRR--RRRLPAGEEEESND 249
D ++ A+ AF+NLD++++ + + D SGCTAI A++TP+H++VAN+GDSR+VM T ++S DHKP ERKRI+ AGG+V RV+GDLA+SR+LGDF +K R +LP E+Q+V+A P+++V D ++ L+LACDG+WDV + E + ++ +GEK + L+AEE+LD CL S+DNMS V+V F AKL +G GV R R RL E E + D
Sbjct: 97 DPHNIGKAMRDAFMNLDQNIRETFDKNYGSDQSGCTAIAALVTPTHIIVANSGDSRSVMAKDGRTVEMSFDHKPINVRERKRIQDAGGLVRSNRVNGDLAVSRALGDFSYKARADLPAEQQQVSAEPDIEVQKIDKTEEF-LVLACDGIWDVMSNDELCAYIRQLMNNGEKDLKLIAEEILDNCLRAGSRDNMSVVIVKFPGAKL-----GQGGGVAKIREERARLEKAEREANGD 326
BLAST of EWM27022.1 vs. NCBI_GenBank
Match: gi|673027204|ref|XP_008867563.1| (hypothetical protein H310_04828 [Aphanomyces invadans] >gi|574476336|gb|ETW03334.1| hypothetical protein H310_04828 [Aphanomyces invadans]) HSP 1 Score: 192.2 bits (487), Expect = 5.918e-56 Identity = 109/242 (45.04%), Postives = 151/242 (62.40%), Query Frame = 0
Query: 1 MVDFVRRTVAYTEYKKTKDVAHLQTAIHSAFLNLDESLKLQDEFVHKHDTSGCTAICAIITPSHVVVANAGDSRAVMYTT-KGTHQLSRDHKPYLEDERKRIESAGGMVSMQRVDGDLALSRSLGDFQFKDR-NLPPERQKVTAVPEVQVHVRDPEKDLCLLLACDGVWDVCESAEAGRIVFDILGDGEKRMALVAEELLDQCLLRYSKDNMSAVVVGF--AKLWEEHGKEGEGVEGRRRRR 238
+VD + + ++K D + A+ +AFL LD L+ + D SGCTAI AI+T +H++VAN+GDSR+V+ T +S DHKP E+ RIE+AGGMV RV+GDLA+SR+LGD+ FK+R +L PE Q+V+ P++++ R + LLLACDGVWDV + EA V ++ GE+ M L+ EELLD CL S+DNMS V+V F AK EGEGV G R++R
Sbjct: 74 LVDTLAKGQGNNQHKNEPDA--IGAALRNAFLTLDNDLRKLQRVENGEDQSGCTAIAAIVTDTHIIVANSGDSRSVLATCGDAVEPMSFDHKPNNPREKLRIENAGGMVRNNRVNGDLAVSRALGDYYFKERHDLAPEEQQVSPEPDIKIEARSAANEF-LLLACDGVWDVLSNEEACDFVRSVMKLGERDMGLICEELLDHCLSLDSRDNMSVVLVAFDGAKF-----GEGEGVYGLRKQR 307 The following BLAST results are available for this feature:
BLAST of EWM27022.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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