EWM30345.1, cds365 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|585113004|gb|EWM30345.1| (prefoldin subunit 2 [Nannochloropsis gaditana]) HSP 1 Score: 298.516 bits (763), Expect = 1.459e-102 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 Query: 1 MNFNGDAEATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVLA 146 MNFNGDAEATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVLA Sbjct: 1 MNFNGDAEATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVLA 146
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|1211306391|ref|XP_021433504.1| (prefoldin subunit 2-like [Oncorhynchus mykiss]) HSP 1 Score: 106.686 bits (265), Expect = 1.397e-26 Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 0 Query: 10 TDPSS--IIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGG 143 + PS+ ++ FQ ++ E + M +K ELEME++EH LVI+ L ++P+RK +RL+GGVL+ERTV EVLP L ++ + L+ + K ++ E+R+KYNIR E E Q KSAA + GG S GG Sbjct: 21 SGPSAEQVVAAFQRMRSEQRSMASKAAELEMEINEHSLVIETLKDVDPTRKCFRLVGGVLVERTVKEVLPALESNKEQISKIVESLNTQMQSKGRELTEYREKYNIRL--VGEGEEGQGKSAASSNGGEGSASKGG 154
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|255552175|ref|XP_002517132.1| (PREDICTED: probable prefoldin subunit 2 [Ricinus communis] >gi|223543767|gb|EEF45295.1| prefoldin subunit, putative [Ricinus communis]) HSP 1 Score: 105.916 bits (263), Expect = 2.003e-26 Identity = 54/141 (38.30%), Postives = 84/141 (59.57%), Query Frame = 0 Query: 5 GDAEATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVL 145 GD E+ + +++ + ++ E Q+ +K+ ELEME+SEH LVI + PL+PSR+ YR++GGVL+ERT+ EVLP + + I +L+ AL KK+K E+ KY IR + + +S GG + S+ GVL Sbjct: 7 GDHESINEQAVVNAYSGMRSELNQIYSKVTELEMEVSEHSLVINAIQPLDPSRRCYRMIGGVLVERTIKEVLPAVQRNKDGIEEVIARLNEALEKKKKDIAEFEAKYKIRIR--------KPESEVKDDGGKKEGSSQGVL 139
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|1158885292|ref|XP_020346988.1| (prefoldin subunit 2-like isoform X2 [Oncorhynchus kisutch]) HSP 1 Score: 105.916 bits (263), Expect = 2.592e-26 Identity = 57/136 (41.91%), Postives = 84/136 (61.76%), Query Frame = 0 Query: 10 TDPSS--IIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGG 143 + PS+ ++ FQ ++ E + M +K ELEME++EH LVI+ L ++P+RK +RL+GGVL+ERTV EVLP L ++ + L+ + K ++ E+R+KYNIR E E Q KSAA + GG S GG Sbjct: 21 SGPSAEQVVAAFQRMRTEQRSMASKAAELEMEINEHSLVIETLKDVDPTRKCFRLVGGVLVERTVKEVLPALESNKEQISKIVESLNTQMQSKGRELTEYREKYNIRL--VGEGEEGQGKSAASSNGGEGSASKGG 154
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|213513175|ref|NP_001134472.1| (Prefoldin subunit 2 [Salmo salar] >gi|209733582|gb|ACI67660.1| Prefoldin subunit 2 [Salmo salar]) HSP 1 Score: 105.531 bits (262), Expect = 4.314e-26 Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 10 TDPSS--IIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGG 143 + PS+ ++ FQ ++ E M +K ELEME++EH LVI+ L ++P+RK +RL+GGVL+ERTV EVLP L ++ + L+ + K ++ E+R+KYNIR E E Q KSAA + GG S GG Sbjct: 21 SGPSAEQVVAAFQRMRSEQCSMASKAAELEMEINEHSLVIETLKDVDPTRKCFRLVGGVLVERTVKEVLPALESNKEQISKIVESLNTQMQSKGRELTEYREKYNIRL--VGEGEEGQGKSAASSNGGEGSASKGG 154
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|242078231|ref|XP_002443884.1| (probable prefoldin subunit 2 [Sorghum bicolor] >gi|1205970998|ref|XP_021320689.1| probable prefoldin subunit 2 [Sorghum bicolor]) HSP 1 Score: 105.145 bits (261), Expect = 4.445e-26 Identity = 58/142 (40.85%), Postives = 84/142 (59.15%), Query Frame = 0 Query: 5 GDA-EATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVL 145 GD EA + + T+ N++ E Q+ TK+ ELEME+SEH LVI + PL+PSR+ YR++GGVL+ERT+ EVLP + L I ++ AL +K+K+ E+ KY IR + A + A GG + +A GVL Sbjct: 7 GDGKEAINEQVVANTYTNMRTEMNQLYTKITELEMEVSEHSLVIGAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVKRNKEGLEEVIARMHEALERKKKEITEFELKYKIRIRKA--------NNDAKDEGGKKEGTAQGVL 140
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|514759525|ref|XP_004964312.1| (PREDICTED: probable prefoldin subunit 2 [Setaria italica] >gi|514759529|ref|XP_004964313.1| PREDICTED: probable prefoldin subunit 2 [Setaria italica] >gi|944244675|gb|KQL08969.1| hypothetical protein SETIT_007441mg [Setaria italica] >gi|944244676|gb|KQL08970.1| hypothetical protein SETIT_007441mg [Setaria italica]) HSP 1 Score: 105.145 bits (261), Expect = 4.494e-26 Identity = 59/143 (41.26%), Postives = 85/143 (59.44%), Query Frame = 0 Query: 4 NGDA-EATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVL 145 +GD EA + I T+ N++ E Q+ TK+ ELEME+SEH LVI + PL+PSR+ YR++GGVL+ERT+ EVLP + L I ++ AL +K+K+ E+ KY IR + A + A GG + +A GVL Sbjct: 6 SGDGKEALNEQVIANTYANMRTEMNQLYTKITELEMEVSEHSLVIGAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVKRNKEGLEEVIARMHEALERKKKEITEFELKYKIRIRKA--------DNNAEEEGGKKEGTAQGVL 140
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|1049283084|ref|XP_017537959.1| (PREDICTED: prefoldin subunit 2 [Pygocentrus nattereri]) HSP 1 Score: 105.145 bits (261), Expect = 5.566e-26 Identity = 55/134 (41.04%), Postives = 78/134 (58.21%), Query Frame = 0 Query: 12 PSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVL 145 P ++ TFQ ++ E + M +K ELEME++EH LVI L ++PSRK YRL+GGVL+ERTV EVLP L ++ I L+ + K ++ E+R++YNIR S + + S A G S GVL Sbjct: 20 PEQVVATFQRMRQEQRSMASKAAELEMEINEHSLVIDTLKEVDPSRKCYRLVGGVLVERTVKEVLPALENNKEQISKIIESLNTQMQAKGRELTEYRERYNIRLVSEDDKQGKGNTSQAKESEGGGSKSGAGVL 153
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|242071401|ref|XP_002450977.1| (probable prefoldin subunit 2 [Sorghum bicolor] >gi|241936820|gb|EES09965.1| hypothetical protein SORBI_3005G157200 [Sorghum bicolor]) HSP 1 Score: 104.76 bits (260), Expect = 5.825e-26 Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = 0 Query: 5 GDA-EATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVL 145 GD EA + I T+ N++ E Q+ TK+ ELEME+SEH LVI + PL+PSR+ YR++GGVL+ERT+ EVLP + L I ++ AL +K+K+ E+ KY IR + A + A GG + +A GVL Sbjct: 7 GDGKEAINEQVIANTYANMRTEMNQLYTKITELEMEVSEHSLVIGAIEPLDPSRRCYRMIGGVLVERTIREVLPAVKRNKEGLEEVIARMHEALERKKKEITEFELKYKIRIRKA--------DNDAEDEGGKKEGTAQGVL 140
BLAST of EWM30345.1 vs. NCBI_GenBank
Match: gi|226497206|ref|NP_001148267.1| (prefoldin subunit 2 [Zea mays] >gi|195617056|gb|ACG30358.1| prefoldin subunit 2 [Zea mays]) HSP 1 Score: 104.76 bits (260), Expect = 5.894e-26 Identity = 57/138 (41.30%), Postives = 82/138 (59.42%), Query Frame = 0 Query: 8 EATDPSSIIQTFQNLQGECQQMTTKLQELEMELSEHELVIQQLTPLEPSRKAYRLLGGVLMERTVGEVLPVLSEFASKLRTYIPQLDVALAKKQKQTREWRDKYNIRAQSAKEIEALQQKSAAGAPGGATDLSAGGVL 145 EA + I T+ N++ E Q+ TK+ ELEME+SEH LVI + PL+PSR+ YR++GGVL+ERT+ EVLP + L I ++ AL +K+K+ E+ KY IR + A + A GG + +A GVL Sbjct: 11 EAINEQVIANTYANMRTEMNQLYTKITELEMEVSEHSLVIGAIEPLDPSRRCYRMIGGVLVERTIKEVLPAVKRNKEGLEEVIARMHEALERKKKEITEFELKYKIRIRKA--------DNDAEDEGGKKEGTAQGVL 140 The following BLAST results are available for this feature:
BLAST of EWM30345.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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