EWM27034.1, cds3643 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM27034.1 vs. NCBI_GenBank
Match: gi|585109208|gb|EWM27034.1| (hypothetical protein Naga_100056g3 [Nannochloropsis gaditana]) HSP 1 Score: 745.732 bits (1924), Expect = 0.000e+0 Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0
Query: 1 MSVSGPLKNAYVEEWMRNALYLPKRPALLMLNGGGGSRKPASDEDILEPRTGSPPLYGYGGDKGDLFEYYDAFGVHSQAMHEAVWKLDHLDKYNFHALVQVGKSTPKPAKWHPGPGGHLLRAQILAHHYLRLLDEAIISVLAALNGENTMLKLETLLETTTPLEQDPTVNEFKLPPPLYCDDFFCGSPASCAMTFEPIAQGSLLELVVSPPEPKTAKPTIESQNNSVWHTQLITYDQNAVVNARNRGAQYLDMKYVLQGNKYAGPLVLGVKTHKKHHMLFCQPPGSGQNQAPIGRNSSVLVDGKDSPFELEDSFYLTHTIRAPCWATKHQLEPGNHTITITPTNADGKYISLSAVIWF 358
MSVSGPLKNAYVEEWMRNALYLPKRPALLMLNGGGGSRKPASDEDILEPRTGSPPLYGYGGDKGDLFEYYDAFGVHSQAMHEAVWKLDHLDKYNFHALVQVGKSTPKPAKWHPGPGGHLLRAQILAHHYLRLLDEAIISVLAALNGENTMLKLETLLETTTPLEQDPTVNEFKLPPPLYCDDFFCGSPASCAMTFEPIAQGSLLELVVSPPEPKTAKPTIESQNNSVWHTQLITYDQNAVVNARNRGAQYLDMKYVLQGNKYAGPLVLGVKTHKKHHMLFCQPPGSGQNQAPIGRNSSVLVDGKDSPFELEDSFYLTHTIRAPCWATKHQLEPGNHTITITPTNADGKYISLSAVIWF
Sbjct: 1 MSVSGPLKNAYVEEWMRNALYLPKRPALLMLNGGGGSRKPASDEDILEPRTGSPPLYGYGGDKGDLFEYYDAFGVHSQAMHEAVWKLDHLDKYNFHALVQVGKSTPKPAKWHPGPGGHLLRAQILAHHYLRLLDEAIISVLAALNGENTMLKLETLLETTTPLEQDPTVNEFKLPPPLYCDDFFCGSPASCAMTFEPIAQGSLLELVVSPPEPKTAKPTIESQNNSVWHTQLITYDQNAVVNARNRGAQYLDMKYVLQGNKYAGPLVLGVKTHKKHHMLFCQPPGSGQNQAPIGRNSSVLVDGKDSPFELEDSFYLTHTIRAPCWATKHQLEPGNHTITITPTNADGKYISLSAVIWF 358
BLAST of EWM27034.1 vs. NCBI_GenBank
Match: gi|585109227|gb|EWM27053.1| (hypothetical protein Naga_100056g2 [Nannochloropsis gaditana]) HSP 1 Score: 438.728 bits (1127), Expect = 8.871e-147 Identity = 221/377 (58.62%), Postives = 272/377 (72.15%), Query Frame = 0
Query: 1 MSVSGPLKNAYVEEWMRNALYLPKRPALLMLNGGGGSRKPASDEDI-LEPRTGSPPLYGYGGDKGDLFEYYDAFGVHSQAMHEAVWKLDHLDKYNFHALVQVGKSTPKPAKWHPGPGGHLLRAQILAHHYLRLLDEAIISV-------------LAALNGENTMLKLETLLETTTPLEQDPTVNEFKLPPPLYCDDFFCGSPASCAMTFEPIAQGSLLELVVSPPEPKTAKPTIESQNNSVWHTQLITYDQNAVVNARNRGAQYLDMKYVLQGNKYAGPLVLGVKTHKKHHMLFCQPPGS-GQNQAPIG---RNSSVLVDGKDSPFELEDSFYLTHTIRAP-CWATKHQLEPGNHTITITPTNADGKYISLSAVIWF 358
M VSGPLKNAYVEEWMRNALYLPKRPALLMLNGG G+R+P ++ + ++ RTG PP + YGGDKGDLFEYYDAFGVHSQAMHEAVWKLDHLDKYNFHALVQ GK TPKPAKWHPGPGGHLLRAQILAHHYLRLLD+AI+ V + ++G ++ ++ + + T + ++ LPPPLYCD FFCGSPASCAMTFEP QGSLL+LV+SP ++ KPT+E Q +WH QL D +AVV ++ +G QYLDMKYVLQGN AGPL L VK+ ++H+ FCQPP G A G ++ V +D K S Y + + P CW ++ +++PG+H ITITPTN+DG Y++LSA+IWF
Sbjct: 283 MMVSGPLKNAYVEEWMRNALYLPKRPALLMLNGGEGAREPDAEGALPVDARTGPPPPFSYGGDKGDLFEYYDAFGVHSQAMHEAVWKLDHLDKYNFHALVQAGKPTPKPAKWHPGPGGHLLRAQILAHHYLRLLDDAIVVVQETFSETGQDNPTIDIIDGADSAVRKD--MGTYSAGIENVEDATLGLPPPLYCDHFFCGSPASCAMTFEPKEQGSLLDLVLSPANLRSTKPTVEPQKPKLWHVQLYAADFDAVVFSKKQGFQYLDMKYVLQGNHKAGPLKLAVKSRSENHIFFCQPPKVWGHMPAHCGDLKDDAVVKIDEKRVSMVKSSSLYDKESSQPPNCWISEWKVKPGSHVITITPTNSDGSYVALSALIWF 657
BLAST of EWM27034.1 vs. NCBI_GenBank
Match: gi|298709904|emb|CBJ26244.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 69.707 bits (169), Expect = 1.646e-9 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 0
Query: 10 AYVEEWMRNALYLPKRPALLMLNGGGGSRKPASDEDILEPRTGSPPLYGY-GGDKGDLFEYYDAFGVHSQAMHEAVWKLDHL---DKYNFHALVQVGKSTPKPAKWHPGPGGHLLRAQILAHHYLRLLDEAI 137
A VE ++R++L LP+RPA+L+L+ E +L+ R GY G K +L E Y FGVH+ + + L+H +++ L GK P+P KWHP P GH L A +L HY +L EAI
Sbjct: 60 AAVELFVRSSLVLPRRPAILVLDAQADQGAKGRLE-LLKHRNRR--FLGYCNGPKRNLMEAYRDFGVHN--IFASSLILEHAAGDERFAHEILYAAGKHYPRPMKWHPAPAGHELVADMLFMHYGKLFLEAI 186 The following BLAST results are available for this feature:
BLAST of EWM27034.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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