EWM30349.1, cds364 (CDS) Nannochloropsis gaditana

Overview
NameEWM30349.1
Unique Namecds364
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:885240..887387 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30349.1
Productsmall-conductance mechanosensitive channel
Orig transcript idgnl|cribi|Naga_100003g132.1866.mrna
GeneMscS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:885240..887387 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010920LSM_dom
IPR011014MscS_channel_TM-2
IPR011066MscC_channel_C
IPR006685MscS_channel
Homology
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|585113008|gb|EWM30349.1| (small-conductance mechanosensitive channel [Nannochloropsis gaditana])

HSP 1 Score: 1469.14 bits (3802), Expect = 0.000e+0
Identity = 715/715 (100.00%), Postives = 715/715 (100.00%), Query Frame = 0
Query:    1 MILRKSDENSTAGCGNSSATYVLSQNSDRRLSCALWSQSNAGQGICSAQDRVEGLCPPSSSQVHVATRHRSPPFLPCAWKKPSSHTLLAVLILLAVETAPSSGQSAPPTFACYPPHLHHRVSPICRHLVRHCGPSRPIRWSSMRIDWFSGPKIAEPVPRKGALSSLVLDPVRRAVELFPNSKGVIDQVWTMLPLALRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKELGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDFSVGFNVPPNPINPLNSGGGNSVPGPGEDNSGSPGPRPTRGVRVMQNMRADDDNVMTTSVMPGPPFPPPPPPSSTQHSSQSSSVPENSSRGPFPPPVSAASPSGPYADLSQDAVVA 715
            MILRKSDENSTAGCGNSSATYVLSQNSDRRLSCALWSQSNAGQGICSAQDRVEGLCPPSSSQVHVATRHRSPPFLPCAWKKPSSHTLLAVLILLAVETAPSSGQSAPPTFACYPPHLHHRVSPICRHLVRHCGPSRPIRWSSMRIDWFSGPKIAEPVPRKGALSSLVLDPVRRAVELFPNSKGVIDQVWTMLPLALRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKELGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDFSVGFNVPPNPINPLNSGGGNSVPGPGEDNSGSPGPRPTRGVRVMQNMRADDDNVMTTSVMPGPPFPPPPPPSSTQHSSQSSSVPENSSRGPFPPPVSAASPSGPYADLSQDAVVA
Sbjct:    1 MILRKSDENSTAGCGNSSATYVLSQNSDRRLSCALWSQSNAGQGICSAQDRVEGLCPPSSSQVHVATRHRSPPFLPCAWKKPSSHTLLAVLILLAVETAPSSGQSAPPTFACYPPHLHHRVSPICRHLVRHCGPSRPIRWSSMRIDWFSGPKIAEPVPRKGALSSLVLDPVRRAVELFPNSKGVIDQVWTMLPLALRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKELGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDFSVGFNVPPNPINPLNSGGGNSVPGPGEDNSGSPGPRPTRGVRVMQNMRADDDNVMTTSVMPGPPFPPPPPPSSTQHSSQSSSVPENSSRGPFPPPVSAASPSGPYADLSQDAVVA 715          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|298715514|emb|CBJ28084.1| (Small Conductance Mechanosensitive Ion channel [Ectocarpus siliculosus])

HSP 1 Score: 340.502 bits (872), Expect = 3.643e-106
Identity = 196/428 (45.79%), Postives = 272/428 (63.55%), Query Frame = 0
Query:  196 LRALINPSDLLLFVTTRLLYRKACRALHAFHHFLWKRAGIMDEPRVYEDSVLGFMEPKLGTLTSFIGVTYVINVVLSLLIDIGWRVRADSARLMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVS-KELGQSLITGVVDYQNELEQVAASGGGGGDRGSNTNNADSMKGAGQQGDFSVGFNVPPNPINPLNSGGGNSV 622
            L  ++ P  L LF+  +++YR+  R L+     +W+     D P+ YE SVLGF+EP+L TL+  + V Y +   + +LI  GW      A++++ ++Y  Y  YFV+E K+ +L  W+PSL+ D+R+ +I +RS SV+ W + + +  E ISA+L+IP++STLAFGGIGGLA GLA KDV+SNFFGG+MLL  EPF PGDMV+F   G   EG+VERVG+YQTRLRGRDTRPTYVPN +F DTMVTNMDRITHR+FE+SF LR+ D   + E++  IK AL+ +P +D+LSPFRVH   F    L +   CYFATKS DE+LYLQQ+AL+E+TRVV            ++D+ +   +G+  + G+++     + VA SG           N    +GA  + D        P PIN     GG+SV
Sbjct:   28 LTNVVTPQKLFLFLLFQIVYRRLLRLLYRLQVQVWRLVRKHD-PQPYEQSVLGFVEPRLRTLSRTLVVAYALKSGVRVLIASGWNANPQLAKVLSDVVYCWYAGYFVDEAKRFFLPVWIPSLKADKRKGFIYNRSLSVLTWSICLLTVSEVISAYLRIPITSTLAFGGIGGLAIGLAGKDVLSNFFGGLMLLLAEPFIPGDMVTFQRGGVRCEGRVERVGWYQTRLRGRDTRPTYVPNGMFSDTMVTNMDRITHRKFESSFQLRYADAPKVAEILQGIKTALKDVPNIDLLSPFRVHLVDFAESGLKINVVCYFATKSFDEFLYLQQVALLEVTRVVQGASATMT-SVLYVDMNNPAPIGKVPLAGMINSAQN-KGVAQSGLPKVVAAPKDLNPKGAEGASIEED-------GPRPINGTGVSGGSSV 445          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|337293658|emb|CCB91646.1| (MscS family inner membrane protein ynaI [Waddlia chondrophila 2032/99])

HSP 1 Score: 159.073 bits (401), Expect = 2.306e-39
Identity = 83/268 (30.97%), Postives = 147/268 (54.85%), Query Frame = 0
Query:  299 AYFVNEVKKEYL---TTWVPSLQEDRRRSYIIDRSSS---------VVLWILAIFSCI------ECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 548
            A F+ ++++ +    T W+    + R +  +++R SS         ++L I  +F+          +    ++ L++ LAFGGIGG+A G A KD+V+NFFGG+M+     F  G+ +   +   H+EG VE +G+Y TR+R    RPTY+PN+VF+D ++ N  R+ +RR + +  +R+ D + +  ++ EI+K L   P +D      VHF  FG+  L++   C+  T +  ++  +QQ  L++I  ++   G   A+PTT + L
Sbjct:   86 ASFIAKIRQLFFLLFTAWIALRWKSRFQKKLVNRVSSRKSAAQDQALILAIGKVFTVFILFVVGMIVLDIFEVQLTALLAFGGIGGVAIGFAGKDIVANFFGGLMIHINRHFAIGEWI--LSPNKHFEGVVEEIGWYMTRIRTFARRPTYIPNAVFIDAIIENPGRMYNRRIKETVGVRYADVKKVDSIVKEIRKMLETHPAIDRSKFLFVHFMNFGASSLNIEVYCFTKTTNWGQWRDIQQDVLLKIADIIKSQGAEIAFPTTTVHL 351          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|837856817|ref|WP_047877706.1| (mechanosensitive ion channel family protein [Photobacterium aquae] >gi|836451223|gb|KLV07365.1| mechanosensitive ion channel protein MscS [Photobacterium aquae])

HSP 1 Score: 156.377 bits (394), Expect = 2.234e-38
Identity = 79/198 (39.90%), Postives = 113/198 (57.07%), Query Frame = 0
Query:  351 LKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 548
            L + LS  L FGG+GGL  G+A+KD+++NFFG  M+ F  PF  GD +    R    EG VE++GF  T +R  D RP YVPNSVF   +V N  R+ +RR + + SLR+QD + +  V+ +IK  L + P +D      V F  +G   L +    +  T +  EY  +QQ  +++I  +V E G  FA+PT  LDL
Sbjct:  155 LGLSLSGVLTFGGVGGLIVGMAAKDLLANFFGAAMIYFDRPFKLGDWIRSPDR--QIEGTVEKIGFRVTMIRTFDKRPLYVPNSVFSSIVVENASRMLNRRIKQTVSLRYQDADKVAAVVKDIKAMLSLHPDIDTTQTLIVSFDNYGPSSLDILVYTFTKTVAWVEYKEVQQDVMLKIVEIVKEHGADFAFPTMTLDL 350          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|1056916585|ref|WP_068330598.1| (mechanosensitive ion channel family protein [Photobacterium jeanii] >gi|1032041359|gb|OAN16930.1| mechanosensitive ion channel protein MscS [Photobacterium jeanii])

HSP 1 Score: 155.221 bits (391), Expect = 6.563e-38
Identity = 80/198 (40.40%), Postives = 115/198 (58.08%), Query Frame = 0
Query:  351 LKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 548
            L + LS  L FGG+GGL  G+A+KD+++NFFGG+M+ F  PF  GD +    R    EG VER+GF  T +R  D RP YVPNSVF   +V N  R+T+RR + + SLR+QD   + +V+  IK  L+  P +D      V F  +G   L +    +  T +  EY  +QQ  +++I  VV + G  FA+PT+ + L
Sbjct:  155 LGLSLSGILTFGGVGGLIVGMAAKDLLANFFGGMMIYFDRPFKVGDWIRSPDR--QIEGTVERIGFRMTVIRTFDKRPLYVPNSVFSSIVVENPSRMTNRRIKQTVSLRYQDAAVVNQVVAGIKTMLQHHPDIDTRQTLIVSFDHYGPSSLDIMVYTFTKTVNWVEYKEVQQDVMLKIVEVVHQHGADFAFPTSTVHL 350          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|1189382683|gb|OSX70113.1| (hypothetical protein BU14_0897s0002 [Porphyra umbilicalis])

HSP 1 Score: 152.91 bits (385), Expect = 1.060e-37
Identity = 84/260 (32.31%), Postives = 136/260 (52.31%), Query Frame = 0
Query:  294 YIAYGAYFVNEVKKEYLTTWVPS--LQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGT---HYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 548
            + AY  + ++ VK   +   V    +    +  ++++R   V +  + + + ++ +     IPL S L  GG GG+A GLAS++   N  GG++L  T PF PG+ +     G+     EG V+RVG   + + G D  PT VPNSVF    VTN+ R+ HRRF  +  LR+ D + +P V+  I+  L   P VD      VH+ ++ +  L + A+ +FA   L E+L   Q  L+ I+ +V   G  FA+PTT +++
Sbjct:   35 HAAYAGWLLSRVKAAVVDRSVDGHGVFGSAKARFLLNRVGDVAILAVVVGAVLDAVG----IPLQSALTLGGFGGIALGLASREAAENLVGGLLLGVTAPFAPGEAIIARKGGSGPPAVEGIVQRVGLINSSVVGFDAVPTTVPNSVFSAAAVTNLSRLKHRRFRQTIGLRYVDVDRVPGVVQGIRSLLAAAPGVDPAKGITVHWVRYAASSLDIEATAFFALGRL-EFLDTVQGLLLRISELVRAAGADFAFPTTTIEV 289          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|502947973|ref|WP_013182949.1| (mechanosensitive ion channel family protein [Waddlia chondrophila] >gi|297377426|gb|ADI39256.1| putative mscS family protein [Waddlia chondrophila WSU 86-1044])

HSP 1 Score: 154.451 bits (389), Expect = 1.093e-37
Identity = 81/268 (30.22%), Postives = 142/268 (52.99%), Query Frame = 0
Query:  299 AYFVNEVKKEYL---TTWVPSLQEDRRRSYIIDRSSS---------------VVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDL 548
            A F+ ++++ +    T W+    + R +  +++R SS                V  +  +F     +    ++ L++ LAFGGIGG+A G A KD+V+NFFGG+M+     F  G+ +   +   H+EG VE +G+Y TR+R    RPTY+PN+VF+D ++ N  R+ +RR + +  +R+ D + +  ++ EI+K L     +D      VHF  FG+  L++   C+  T +  ++  +QQ  L++I  ++   G   A PTT + L
Sbjct:   86 ASFIAKIRQLFFLLFTAWIALRWKSRFQKKLVNRVSSRKSAAQDQALIQAIGKVFTVFILFVVGMIVLDIFEVQLTALLAFGGIGGVAIGFAGKDIVANFFGGLMIHINRHFAIGEWI--LSPNKHFEGVVEEIGWYMTRIRTFARRPTYIPNAVFIDAIIENPGRMYNRRIKETVGVRYADVKKVDSIVKEIRKMLETHSAIDRSKFLFVHFMNFGASSLNIEVYCFTKTTNWGQWRDIQQDVLLKIADIIESQGAEIALPTTTVHL 351          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|1178692301|ref|WP_083200831.1| (mechanosensitive ion channel family protein [Marinomonas spartinae] >gi|1041806455|emb|SBS28013.1| Low conductance mechanosensitive channel YnaI [Marinomonas spartinae] >gi|1043928733|emb|SBS28668.1| Low conductance mechanosensitive channel YnaI [Marinomonas spartinae])

HSP 1 Score: 153.68 bits (387), Expect = 3.273e-37
Identity = 87/256 (33.98%), Postives = 132/256 (51.56%), Query Frame = 0
Query:  295 IAYGAYFVNEVKKEYLTTWVPSLQEDRRRSYIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVS 550
            IA   +FV  + KE   T   S +   +  Y    + S +L    I + +  I   L   +S  LAFGG+GG+A G A+KD+++NFFGG+++    PF  GD +   +   + EG VE +G+ QTR+R  D RP YVPN+ F    V N  R++HRR   +  +R+ DF  LP++I  IK+ +     +D    F V+FTQFG   L      +  T     Y  ++Q  L +   ++ E G   A+PTT + + S
Sbjct:  104 IAIITWFVLRIIKEAENTLTTSSKVKNKVDYTTASAISKLLRASVIITALLVILQSLGYSISGVLAFGGVGGIAVGFAAKDLLANFFGGLVVYLDRPFAVGDWIR--SPDKNIEGTVENIGWRQTRIRTFDKRPLYVPNATFSTISVENPSRMSHRRINETIGVRYDDFSKLPQIIASIKEMVSQHQDLDTNETFMVNFTQFGPSSLDFFIYTFTKTVDWKTYHDVKQDVLFKTMEIIEEYGAEVAFPTTTMHMAS 357          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|684145178|dbj|GAL05654.1| (small-conductance mechanosensitive channel [Photobacterium aphoticum])

HSP 1 Score: 147.902 bits (372), Expect = 3.816e-37
Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 0
Query:  359 LAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVLSPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLDLVSKE 552
            L FGG+GGL  G+A+KD+++NFFG VM+ F  PF  GD +    R  + EG VE++GF  T +R  D RP YVPNSVF   +V N  R+T+RR + +  LR+QD E +  V+ +IK  L +   +D      V F  +G   L++    +  T    EY  +QQ  +++I  +V E G  FA+PTT L   + E
Sbjct:    2 LTFGGVGGLIVGMAAKDLLANFFGAVMIYFDRPFQLGDWIRSPDR--NIEGTVEQIGFRVTMIRTFDKRPLYVPNSVFSSIVVENASRMTNRRIKQTVGLRYQDAEKVEGVVKDIKAMLTLHDDIDTTQTMIVSFDNYGPSSLNILVYTFTKTVGWVEYKEVQQDVMLKIVEIVKEHGADFAFPTTTLQFDTPE 193          
BLAST of EWM30349.1 vs. NCBI_GenBank
Match: gi|544216635|ref|XP_005538462.1| (similar to small conductance mechanosensitive ion channel [Cyanidioschyzon merolae strain 10D] >gi|449019024|dbj|BAM82426.1| similar to small conductance mechanosensitive ion channel [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 154.451 bits (389), Expect = 7.127e-37
Identity = 86/263 (32.70%), Postives = 140/263 (53.23%), Query Frame = 0
Query:  288 LMASLLYIAYGAYFVNEVKKEYLTTWVPSLQEDRRRS--YIIDRSSSVVLWILAIFSCIECISAFLKIPLSSTLAFGGIGGLAFGLASKDVVSNFFGGVMLLFTEPFTPGDMVSFTTRGTHYEGKVERVGFYQTRLRGRDTRPTYVPNSVFVDTMVTNMDRITHRRFEASFSLRFQDFETLPEVILEIKKALRVLPKVDVL-SPFRVHFTQFGSYCLSLTASCYFATKSLDEYLYLQQLALMEITRVVTECGCRFAYPTTHLD 547
            +++ L  I Y A+ ++         W    +ED   S  +++ R  +V+++ +A    +E       +PL S LAFGGIGGLA GLA++++  NF  G+ML    PF PG+ V   T G    G+V ++GFY+T L G D RP ++PN+  ++  +TN  RIT+RR    F LR+QD + +  ++  +++ L  +P++        V FT+F  Y L +  SC         +L +QQ  L+E+ R+V      FA PT  ++
Sbjct:  205 VISRLATIGYFAFVLDT-----FYNWFLYEREDLSLSQIFVLGRLGTVLIYAVAFLVFVETTG----LPLRSILAFGGIGGLAVGLATQELAKNFISGIMLALGAPFAPGESVQLNTLGV--SGQVRQIGFYKTELIGADGRPIWIPNAQLLNERLTNNSRITNRRINLRFGLRYQDIDKIGRIVERVREMLAEVPEIAAYRESISVFFTEFAEYSLPIQLSCIVNVTDGRRFLEIQQQVLIELNRIVKSELADFALPTRAIE 456          
The following BLAST results are available for this feature:
BLAST of EWM30349.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113008|gb|EWM30349.1|0.000e+0100.00small-conductance mechanosensitive channel [Nannoc... [more]
gi|298715514|emb|CBJ28084.1|3.643e-10645.79Small Conductance Mechanosensitive Ion channel [Ec... [more]
gi|337293658|emb|CCB91646.1|2.306e-3930.97MscS family inner membrane protein ynaI [Waddlia c... [more]
gi|837856817|ref|WP_047877706.1|2.234e-3839.90mechanosensitive ion channel family protein [Photo... [more]
gi|1056916585|ref|WP_068330598.1|6.563e-3840.40mechanosensitive ion channel family protein [Photo... [more]
gi|1189382683|gb|OSX70113.1|1.060e-3732.31hypothetical protein BU14_0897s0002 [Porphyra umbi... [more]
gi|502947973|ref|WP_013182949.1|1.093e-3730.22mechanosensitive ion channel family protein [Waddl... [more]
gi|1178692301|ref|WP_083200831.1|3.273e-3733.98mechanosensitive ion channel family protein [Marin... [more]
gi|684145178|dbj|GAL05654.1|3.816e-3739.69small-conductance mechanosensitive channel [Photob... [more]
gi|544216635|ref|XP_005538462.1|7.127e-3732.70similar to small conductance mechanosensitive ion ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna364rna364Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications