EWM27037.1, cds3638 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|585109211|gb|EWM27037.1| (peptidyl-prolyl cis-trans isomerase b precursor [Nannochloropsis gaditana]) HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0 Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0
Query: 1 MPFRLNGSRPRVYKRFCRWRGRLTVLPHFLTRWKPSLETEMRPTQSCLCITMLLMASLVIQGFLGTVQGPRQRRDISLSAAPARRGDDRRHVFKKAATTVLLLTTAASTSPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
MPFRLNGSRPRVYKRFCRWRGRLTVLPHFLTRWKPSLETEMRPTQSCLCITMLLMASLVIQGFLGTVQGPRQRRDISLSAAPARRGDDRRHVFKKAATTVLLLTTAASTSPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL
Sbjct: 1 MPFRLNGSRPRVYKRFCRWRGRLTVLPHFLTRWKPSLETEMRPTQSCLCITMLLMASLVIQGFLGTVQGPRQRRDISLSAAPARRGDDRRHVFKKAATTVLLLTTAASTSPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|553184434|ref|XP_005854089.1| (peptidyl-prolyl cis-trans isomerase b precursor [Nannochloropsis gaditana CCMP526] >gi|422294975|gb|EKU22274.1| peptidyl-prolyl cis-trans isomerase b precursor [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 467.618 bits (1202), Expect = 2.113e-165 Identity = 234/248 (94.35%), Postives = 234/248 (94.35%), Query Frame = 0
Query: 52 MLLMASLVIQGFLGTVQGPRQRRDISLSAAPARRGDDRRHVFKKAATTVLLLTTAASTSPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
MLLMASL RRDISLSAAPARRGDDRRHVFKKAATTVLLLTTAASTSPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL
Sbjct: 1 MLLMASL--------------RRDISLSAAPARRGDDRRHVFKKAATTVLLLTTAASTSPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 234
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|873230636|emb|CEM10275.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 160.229 bits (404), Expect = 9.518e-43 Identity = 87/211 (41.23%), Postives = 128/211 (60.66%), Query Frame = 0
Query: 99 TVLLLTTAASTSPTLSAPYDQVEVSDPIFPNITEPAVTSVCFLEFASEKTN-------FGRIEVSLYGKVCPQTAANFEALCRDG-YKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSL--EGMLSMVND-KSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGV 298
T LL +A + AP D +F N T P +T+ C+LE A GR+ +S+YG++ P+TA NF LC G Y+ S +YR++KD+++QMGDIG+ G +GRS+ G+PLPKE R++HS+ G++SMV D K+ VDSRFFI + D WAD R+VAFGRV G +++++ K +V+P +N P + I +GV
Sbjct: 95 TALLPASADESEAREDAPAS----PDAVFLNETTPKITARCWLEIAEAPKTADGAPLLLGRLNISVYGEIVPKTADNFIQLCSSGSYQNSTIYRIVKDYALQMGDIGAAGTGKSGRSAQPDGSPLPKENTRIRHSVPGHGVVSMVRDLKTKKVDSRFFITLVDDAGWADSRFVAFGRVQGGEGLMEQLGKEKVEPVTNRPVRKLIIADSGV 301
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|1072231031|gb|OEU15764.1| (cyclophilin-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 143.665 bits (361), Expect = 6.130e-39 Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 0
Query: 133 PAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALC-RDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAG 297
P +T +L+ K GR+ + LYG + P+TA NFE LC + Y G+N YRV+ D +IQ G IG G TG+SS G + ++HS G+LSMV G VDSRFFIN +D WAD RY AFG V +G+ ++K++EKV V PP N P +KI A+G
Sbjct: 3 PKITKRVYLDVEFGKNEKGRLVIGLYGDIMPKTAENFEKLCASNSYAGTNFYRVISDTTIQGGAIGDP-SGKTGKSSFDDGKSFEPDNFNIKHSKSGILSMVKGIGG-VDSRFFINTQEDAGWADDRYAAFGIVEEGMYLVKQIEKVPVSPPKNSPVNEVKILASG 166
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|298712278|emb|CBJ26729.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 140.584 bits (353), Expect = 1.646e-36 Identity = 76/184 (41.30%), Postives = 108/184 (58.70%), Query Frame = 0
Query: 122 VSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRD------GYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
V+D I EP VT F++ + GR+ ++LYGKV P T NF AL Y+G+ YRVL +IQMG IGS+ G +G SS G +P+E ++H EG+LSMV + DSRFFI++ D WAD RYVAFGR+ +G++V+ +E+V+V+ +N P P+ I G+L
Sbjct: 84 VADKIAAGWQEPEVTQRAFMDITIGDSPSGRLVINLYGKVVPDTVKNFVALITGKNAAGVSYQGTEAYRVLDGLNIQMGAIGSRS-GKSGVSST--GENIPQENFDIKHMKEGLLSMVRNADAQGDSRFFISIKDDAGWADDRYVAFGRIAEGMDVVHLIERVKVEGGTNKPKKPVVIEKCGML 264
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|922860965|gb|KOO28782.1| (peptidyl-prolyl cis-trans isomerase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 132.88 bits (333), Expect = 1.394e-34 Identity = 70/178 (39.33%), Postives = 103/178 (57.87%), Query Frame = 0
Query: 130 ITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRD----GYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVN----DKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
+T P VTS C+L+ A + + GRI + LYG+V P+ A NF ALC GY+GS+ +++L +Q G++ G SS+ G P + ++H++ GM+SMVN SG D+RF I + D + DGRY AFGRV+ G+ V++ +E+V VK VP + I AAG L
Sbjct: 2 VTPPKVTSRCYLDVAIDGSPAGRIAIDLYGEVAPRAAENFRALCTGEKGYGYQGSSFFKILSGLVMQAGEV-------PGHSSIYGDQPFAHDNYLIKHNVAGMVSMVNTGVGGNSGQSDTRFLIQLPDDAGFLDGRYEAFGRVSAGMNVVRMIEQVPVKTTRQVPVQKVSIEAAGEL 172
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|397639875|gb|EJK73815.1| (hypothetical protein THAOC_04545 [Thalassiosira oceanica]) HSP 1 Score: 129.413 bits (324), Expect = 7.167e-33 Identity = 72/185 (38.92%), Postives = 104/185 (56.22%), Query Frame = 0
Query: 126 IFPNITEPAVTSVCFLE--FASEKTNFGRIEVSLYGKVCPQTAANFEALCRD------GYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTK---GLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
I P++ P VTS +L+ FA K R+ + L+G+ P+ A NF +LC Y G+ YR L SIQ G IGS G +G SSL+ G P + ++HS +G++S V + +G +DSRFF+ D WADGRY AFG V + G+++++ + V+V+ P N P PI I A G L
Sbjct: 22 IDPSVAPPRVTSKVYLDVKFAKYKEP-KRLVIGLFGEAMPRAAENFASLCAGDNAGGRSYAGTRFYRALSGNSIQGGAIGSPNTGRSGLSSLEDGATFPPDNFDIKHSTQGLVSAVRNPNGEIDSRFFVQTEDDAGWADGRYAAFGIVLEEGGGMDLVRRISNVDVQTPQNSPKDPITIVACGRL 205
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|451998443|gb|EMD90907.1| (hypothetical protein COCHEDRAFT_1021706 [Bipolaris maydis C5]) HSP 1 Score: 123.635 bits (309), Expect = 1.086e-30 Identity = 68/174 (39.08%), Postives = 100/174 (57.47%), Query Frame = 0
Query: 130 ITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRD----GYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
+ P +TS F + + + GRI + LYGK P+T NF AL GY+GS +RV+KDF IQ GD +K G G+S G P E +++H+ +G+LSM N T S+FFI SW DG++V FG+V +G +V++++E V+ K P + P P+KI +G L
Sbjct: 29 VKSPKITSKVFFDIEQDGESLGRIVIGLYGKTVPKTTENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDF-TKGDGTGGKSIY--GEKFPDENFKLKHTRKGLLSMANAGKDTNGSQFFITTAIT-SWLDGKHVVFGQVLEGYDVVEKIENVQ-KAPGDRPVKPVKIAKSGEL 197
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|928522244|ref|XP_014079919.1| (hypothetical protein COCC4DRAFT_80920 [Bipolaris maydis ATCC 48331] >gi|477588932|gb|ENI06010.1| hypothetical protein COCC4DRAFT_80920 [Bipolaris maydis ATCC 48331]) HSP 1 Score: 123.635 bits (309), Expect = 8.731e-30 Identity = 68/174 (39.08%), Postives = 100/174 (57.47%), Query Frame = 0
Query: 130 ITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRD----GYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMGKDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKPPSNVPTLPIKITAAGVL 299
+ P +TS F + + + GRI + LYGK P+T NF AL GY+GS +RV+KDF IQ GD +K G G+S G P E +++H+ +G+LSM N T S+FFI SW DG++V FG+V +G +V++++E V+ K P + P P+KI +G L
Sbjct: 29 VKSPKITSKVFFDIEQDGESLGRIVIGLYGKTVPKTTENFRALATGEKGFGYEGSTFHRVIKDFMIQGGDF-TKGDGTGGKSIY--GEKFPDENFKLKHTRKGLLSMANAGKDTNGSQFFITTAIT-SWLDGKHVVFGQVLEGYDVVEKIENVQ-KAPGDRPVKPVKIAKSGEL 197
BLAST of EWM27037.1 vs. NCBI_GenBank
Match: gi|546324259|ref|XP_005718312.1| (unnamed protein product [Chondrus crispus] >gi|507114909|emb|CDF38419.1| unnamed protein product [Chondrus crispus]) HSP 1 Score: 121.709 bits (304), Expect = 2.967e-29 Identity = 75/192 (39.06%), Postives = 112/192 (58.33%), Query Frame = 0
Query: 113 LSAPYDQV--EVSDPIFPNITEPAVTSVCFLEFASEKTNFGRIEVSLYGKVCPQTAANFEALCRDGYKGSNVYRVLKDFSIQMGDIGSKKRGATGRSSLKGGTPLPKETLRVQHSLEGMLSMVNDKSGTVDSRFFINMG-KDGSWADGRYVAFGRVTKGLEVLKEVEKVEVKP--PSNVPTLPIKITAAGVL 299
LS+P ++ E I P EP +T FL+ + + R+ + LYG V P T ANF+AL + GY G++VYRV+ ++Q+GD+ K G +GR++ G+ L E +RV+H++ G++SMV G DSRFF+N D + DGRY AFGRV + + +VE+ K S +P ++I AAGVL
Sbjct: 84 LSSPTEEAAKEALQDIDPGSAEPKITDRVFLDLRLDGSVAERVTIGLYGDVTPATVANFKALLQSGYVGTSVYRVVPGLTVQLGDV-LKNGGRSGRAATADGS-LALENVRVRHTIPGLVSMVRGVDGRGDSRFFVNTRPGDSGYLDGRYCAFGRVLENMAFWYKVERKANKGVFASRLP--KVEIVAAGVL 271 The following BLAST results are available for this feature:
BLAST of EWM27037.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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