EWM27050.1, cds3636 (CDS) Nannochloropsis gaditana

Overview
NameEWM27050.1
Unique Namecds3636
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:877113..877206 -
Alignment locationCM002461.1:875654..876831 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27050.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100056g10.10463.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:877113..877206 -
CM002461.1supercontigCM002461.1:875654..876831 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM27050.1 vs. NCBI_GenBank
Match: gi|585109224|gb|EWM27050.1| (hypothetical protein Naga_100056g10 [Nannochloropsis gaditana])

HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0
Identity = 423/423 (100.00%), Postives = 423/423 (100.00%), Query Frame = 0 
Query:    1 MKKSFFGGVSRQSHGILIRVFLCAILASSSSAYTINSPSRSVSASPLWRPLRESKPPRASTRLHSAASSGPGAFENDDSGWKDVTFIPQKTADLKPGAFRLPRLTDFFATLPPASRWHKLLRRKKPAYESLRHDDYVEACRSLGVPPDIEEDKLAAKVEALLVKYEKDRKKRIMIDWARDKIFEHRIFLQLDGQAVKPPGGMDMRLLDERFLEISPKDTLDLMTALDLSPADLKGKPGPLTAVVNNPLLRALQITRLVKMGRFVLMAFGESLEAPNLRRLLWPGTVGLALALWFGNAVDFVPLKYVITTVAHAGPIYNRGEAKLANRRERRPIKWTKLLLSLAFMALSTAGAWAGGRAWCALKYPTGDLPENIFVPLVANLVTYVMSSCFFIRESTLAGGRAARDAEGGDGGKGGRGGGRRPA 423
            MKKSFFGGVSRQSHGILIRVFLCAILASSSSAYTINSPSRSVSASPLWRPLRESKPPRASTRLHSAASSGPGAFENDDSGWKDVTFIPQKTADLKPGAFRLPRLTDFFATLPPASRWHKLLRRKKPAYESLRHDDYVEACRSLGVPPDIEEDKLAAKVEALLVKYEKDRKKRIMIDWARDKIFEHRIFLQLDGQAVKPPGGMDMRLLDERFLEISPKDTLDLMTALDLSPADLKGKPGPLTAVVNNPLLRALQITRLVKMGRFVLMAFGESLEAPNLRRLLWPGTVGLALALWFGNAVDFVPLKYVITTVAHAGPIYNRGEAKLANRRERRPIKWTKLLLSLAFMALSTAGAWAGGRAWCALKYPTGDLPENIFVPLVANLVTYVMSSCFFIRESTLAGGRAARDAEGGDGGKGGRGGGRRPA
Sbjct:    1 MKKSFFGGVSRQSHGILIRVFLCAILASSSSAYTINSPSRSVSASPLWRPLRESKPPRASTRLHSAASSGPGAFENDDSGWKDVTFIPQKTADLKPGAFRLPRLTDFFATLPPASRWHKLLRRKKPAYESLRHDDYVEACRSLGVPPDIEEDKLAAKVEALLVKYEKDRKKRIMIDWARDKIFEHRIFLQLDGQAVKPPGGMDMRLLDERFLEISPKDTLDLMTALDLSPADLKGKPGPLTAVVNNPLLRALQITRLVKMGRFVLMAFGESLEAPNLRRLLWPGTVGLALALWFGNAVDFVPLKYVITTVAHAGPIYNRGEAKLANRRERRPIKWTKLLLSLAFMALSTAGAWAGGRAWCALKYPTGDLPENIFVPLVANLVTYVMSSCFFIRESTLAGGRAARDAEGGDGGKGGRGGGRRPA 423
The following BLAST results are available for this feature:
BLAST of EWM27050.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109224|gb|EWM27050.1|0.000e+0100.00hypothetical protein Naga_100056g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3645rna3645Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications