EWM27038.1, cds3620 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|585109212|gb|EWM27038.1| (drug metabolite transporter superfamily [Nannochloropsis gaditana]) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0
Query: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFELPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTRSKA 295
MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFELPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTRSKA
Sbjct: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFELPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTRSKA 295
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|676381715|ref|XP_009034136.1| (hypothetical protein AURANDRAFT_3874, partial [Aureococcus anophagefferens] >gi|323455051|gb|EGB10920.1| hypothetical protein AURANDRAFT_3874, partial [Aureococcus anophagefferens]) HSP 1 Score: 229.18 bits (583), Expect = 1.423e-70 Identity = 129/292 (44.18%), Postives = 189/292 (64.73%), Query Frame = 0
Query: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFE-LPNQAR-MTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCR 290
+YM VGP LIL+NK ++ +GF YPM +S +G +SS++ + F V+V ++ L +QAR ++ Y +V VG AA+L GNA Y++LTVSF+Q+LKAFTP +V++ L VEAP + ++V + GT ++S+GE + NLTG L+M +AE +EA RLVL QR L +L+FG E LY M+P A + ++ E P + +G FA++ + +F A LG V+ SF+V++RT+SV +K+LGTARNA LVLLS GE V++ Q LGY +AFF Y Y +
Sbjct: 3 LYMVVGPALILVNKQLMTS---YGFPYPMLISGIGQVSSAIGSFFVVKVFKWQPLSDQARSISWDFYRKNMVVVGAAFAASLCFGNAGYIYLTVSFVQILKAFTPCVVVLFLYLSGVEAPSRNVALSVAAMSAGTVISSFGEAHFNLTGFLIMCAAETSEATRLVLTQRLLCNLKFGAFEGLYLMAPICAAWMWGLALFLEVPKLRASGDFAKITENGDVFLIAALLGFAVNVASFLVIKRTSSVMVKLLGTARNAGLVLLSALALGEEVTAQQALGYGICLAFFAAYNYFK 291
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|551548819|ref|XP_005762052.1| (hypothetical protein EMIHUDRAFT_62014 [Emiliania huxleyi CCMP1516] >gi|485610930|gb|EOD09623.1| hypothetical protein EMIHUDRAFT_62014 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 224.942 bits (572), Expect = 3.812e-68 Identity = 131/292 (44.86%), Postives = 184/292 (63.01%), Query Frame = 0
Query: 2 YMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFELPNQARMTRQTYL-TTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTR 292
Y++VGP LIL+N+H+LK + GF++PM LS LGL+ +SL A V V P+ M ++ T ++P+G AATLA GNAVY++L V FIQMLK+FTP + L + L ++E P + M V+G+C GT+ ASYG +LTG+ +M SAE +EA+RLVL Q+ L++ FGVVE Y+M+P V L ++ + E P A A ++P F + LG GV++ + V++ TNSVTLKVL TARNA LVL+S E VS + LGY+ ++ FG Y Y R R
Sbjct: 66 YLSVGPALILVNRHLLKVV---GFDFPMMLSGLGLVGASLTAVILVNVLRVVEPSHRSMLTPRFVATNLLPIGAAMAATLAAGNAVYLYLPVGFIQMLKSFTPTVTLAMLCLLRIEFPSPLVSMTVLGMCGGTAAASYGAPAFDLTGLCIMLSAEASEALRLVLTQKLLQNHSFGVVEGQYYMAPISGVWLFASAAVFELPRALSTNALAMPLANPWPFLLSMALGAGVNYCAAAVIKLTNSVTLKVLSTARNASLVLVSAAALNEEVSRIELLGYSITLISFGMYQYFRAR 354
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|922868421|gb|KOO34806.1| (drug metabolite transporter superfamily [Chrysochromulina sp. CCMP291]) HSP 1 Score: 219.935 bits (559), Expect = 3.635e-66 Identity = 122/299 (40.80%), Postives = 185/299 (61.87%), Query Frame = 0
Query: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFELPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEV---NMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSM----HRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTR 292
+Y+ +GPTLI++N+ +L FNYPM ++SLG+L S++V+ V + +T + ++ ++P+G A TLA GN V+++L V FIQMLKA TP++ L + + +E P + ++V+GI LGT +AS G N ++ G+ LM AE +EA++LVL+Q+ L +L+FGV+E Y+M+P A+ L A+++ E P HR A A + S P LF + LG GVH +F+V++ TNSVTLKVLGT RNA LVL S WY E ++ + +GY S+ FF Y + R
Sbjct: 61 IYLTIGPTLIIVNRTLLV---ARKFNYPMTVASLGVLCSTVVSFVLVHCRCVRREHTNLITPKFFVYNLLPIGASLATTLACGNWVHLYLPVGFIQMLKATTPMVTLAMLWVSGIETPTLRVTLSVLGIVLGTCIASLGASLGGNFSVVGLGLMLLAELSEALKLVLIQKMLTNLKFGVIEGQYYMAPVSALWLCSAAMLMELPKAALPAHRPHALALIHSEPQLFIASAVLGFGVHLGTFLVIKTTNSVTLKVLGTMRNAGLVLFSATWYDETITRLEAIGYCISLLFFAAYNLYKIR 356
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|551669647|ref|XP_005837582.1| (hypothetical protein GUITHDRAFT_66892, partial [Guillardia theta CCMP2712] >gi|428181739|gb|EKX50602.1| hypothetical protein GUITHDRAFT_66892, partial [Guillardia theta CCMP2712]) HSP 1 Score: 208.379 bits (529), Expect = 2.395e-62 Identity = 111/294 (37.76%), Postives = 189/294 (64.29%), Query Frame = 0
Query: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFELPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVG--ILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTR 292
++M VGP+L++LNK IL D GF YPM +S LGL+ +++ R+ +L ++ +T + ++ +PVGIC AATLALGNA Y+++ ++ IQ LK+FTP++ +V +L + E+P + C A++ +C GTS+A++G+ ++ G+LL E+IRLV+ L ++ V+E++Y++SPAG + L A ++ E P+M R G + ++ +P +F A +LGVGV ++ V++ T++ +LKVL RN + V + YGE+V++ Q +GY S+A F +YTY ++R
Sbjct: 3 IFMVVGPSLMVLNKEIL---DVVGFKYPMLVSCLGLVFAAVFTQLLKRLNLLKLQYESTVTFRFWIYRCLPVGICHAATLALGNAQYLYMGMAAIQFLKSFTPIVTAIVTYIMLNRKESPRS--CFALVVLCFGTSMAAHGDATISTFGVLLQVGGALAESIRLVMTDFLLSGIKMNVLENMYWLSPAGGIALFTAGMIVEGPTMIRRGDYIKLWLNPFMFTLAASLGVGVQLITTAVIKTTSATSLKVLSQVRNTIPVFYGILIYGEIVTAKQSVGYIISLAAFSYYTYSKSR 291
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|551603115|ref|XP_005783086.1| (hypothetical protein EMIHUDRAFT_456520 [Emiliania huxleyi CCMP1516] >gi|485636039|gb|EOD30657.1| hypothetical protein EMIHUDRAFT_456520 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 209.149 bits (531), Expect = 3.101e-62 Identity = 135/293 (46.08%), Postives = 188/293 (64.16%), Query Frame = 0
Query: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFE-LPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTR 292
+Y+ VGP LIL+NKH+LKD+ GF +PM +S +G SS+L + A+RV + L +T YL +V VG AA+L GNA Y++LTVSF+Q+LKAFTPV V+V+ +VE P + ++V I T++AS GE + NLTG+L+M +AE EA RLVL Q+ L +L+F +E LY+M+P A + + + E P AF+ VA + FATA LG V+ SF+V+QRT+SV LK+LGTARNA LVL S + GE ++ Q GYA S+AFFG Y Y + +
Sbjct: 43 VYLMVGPALILVNKHLLKDV---GFGFPMMVSGIGQASSALGSFLALRVLRLQPLTCAKHVTWPFYLRNMVVVGGATAASLCFGNAGYLYLTVSFVQILKAFTPVFVVVMLYATRVETPSPRVALSVGLISAATAIASAGEAHFNLTGVLIMCAAETCEATRLVLTQKLLTNLKFPAMEGLYYMAPICAGWMFGLAAVLEVPRALEKNAFSLVAPNAAAFATAVVLGFAVNIASFLVIQRTSSVMLKLLGTARNAGLVLFSAVFLGEEITPLQGFGYALSLAFFGLYNYYKIK 332
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|551575280|ref|XP_005773362.1| (hypothetical protein EMIHUDRAFT_450858 [Emiliania huxleyi CCMP1516] >gi|485624974|gb|EOD20933.1| hypothetical protein EMIHUDRAFT_450858 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 209.149 bits (531), Expect = 3.308e-62 Identity = 135/293 (46.08%), Postives = 188/293 (64.16%), Query Frame = 0
Query: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFE-LPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTR 292
+Y+ VGP LIL+NKH+LKD+ GF +PM +S +G SS+L + A+RV + L +T YL +V VG AA+L GNA Y++LTVSF+Q+LKAFTPV V+V+ +VE P + ++V I T++AS GE + NLTG+L+M +AE EA RLVL Q+ L +L+F +E LY+M+P A + + + E P AF+ VA + FATA LG V+ SF+V+QRT+SV LK+LGTARNA LVL S + GE ++ Q GYA S+AFFG Y Y + +
Sbjct: 43 VYLMVGPALILVNKHLLKDV---GFGFPMMVSGIGQASSALGSFLALRVLRLQPLTCAKHVTWPFYLRNMVVVGGATAASLCFGNAGYLYLTVSFVQILKAFTPVFVVVMLYATRVETPSPRVALSVGLISAATAIASAGEAHFNLTGVLIMCAAETCEATRLVLTQKLLTNLKFPAMEGLYYMAPICAGWMFGLAAVLEVPRALEKNAFSLVAPNAAAFATAVVLGFAVNIASFLVIQRTSSVMLKLLGTARNAGLVLFSAVFLGEEITPLQGFGYALSLAFFGLYNYYKIK 332
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|922856366|gb|KOO24729.1| (glucose-6-phosphate phosphate and phosphoenolpyruvate phosphate antiporter [Chrysochromulina sp. CCMP291]) HSP 1 Score: 200.675 bits (509), Expect = 1.992e-58 Identity = 126/331 (38.07%), Postives = 179/331 (54.08%), Query Frame = 0
Query: 2 YMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSL----VAHFAVRVG-----------------GFE-----LPNQA-----------RMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAP--EAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTRS 293
Y VGPTL+L+N IL +L F +P+FLS+LG + +S V H RV G E P + T Q +L ++P+G Q T A+ NA YM+LT++ QML +FTP + LV+ + VE P A +C+ ++G LG ++ASYGE ++L GM EA RLVL+QR LK+ + GV+ES YF +P A LL ++ +E P G FA +A+HP+LF + LGV L+F+V++ TNSVTLKV+ T RNA VL +V GE ++ Q GY+ S+AFF Y Y ++
Sbjct: 56 YALVGPTLVLVNARILNELH---FPFPLFLSALGQVVTSFYCAGVIHLQPRVERLWRRWTKPRATTAPKLGIEPVPITTPKASGGGEAAEGGIGSTTFQFWLWNMIPIGAAQGLTFAMTNAAYMYLTITLTQMLASFTPTVTLVLLYVTGVEIPTTRATVCVCLIG--LGCAIASYGEGQLSLIGMAFRSVGIVAEATRLVLLQRLLKNFKLGVLESQYFFAPTAAAFLLVGALFTEAPQFREKGGFATMAAHPILFTASSLLGVVASMLTFIVIKLTNSVTLKVINTGRNAAFVLYTVVIMGEPATTIQIFGYSISLAFFSIYLYVQSNK 381
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|145350352|ref|XP_001419573.1| (DMT family transporter: phosphate/phosphoenolpyruvate [Ostreococcus lucimarinus CCE9901] >gi|144579805|gb|ABO97866.1| DMT family transporter: phosphate/phosphoenolpyruvate [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 195.667 bits (496), Expect = 5.052e-57 Identity = 112/294 (38.10%), Postives = 173/294 (58.84%), Query Frame = 0
Query: 1 MYMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRVGGFELPNQARMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTRSK 294
++ +LI LN H+L++ GF+YPM L ++G+LSS L+A V G +L ++A +TR+ Y I+P+G A +L GN VY++L+VSFIQMLK+ P + LVV +E + V + LGT +A+YGEV + G+++M +EF EAIR+ Q L +L+F ++E LY M PA + L +M E NGA+ P F A LG GV++L+ V++ T+ +T KV+G +NA+++LL+V +G V+S Q GY S+ GF+ Y R +S+
Sbjct: 25 LWACASSSLIFLNNHLLRE---RGFSYPMMLCTMGMLSSWLIACALVHTGRVKLKHEAVVTRRWYARHILPIGSLGAVSLGFGNYVYLYLSVSFIQMLKSAVPAVTLVVMTTAGLEKLHGTTLLGVGIVTLGTFIAAYGEVKFSAIGVVMMIVSEFAEAIRMAFYQYVLGNLKFDLIEGLYVMGPAALLFLGLGIVMFELRDFLDNGAWYIPMDSPHHFFAAALLGFGVNYLTLGVIKATSGLTFKVMGQVKNAVVILLAVVIFGNPVTSIQLFGYTLSLV--GFFIYQRGKSQ 313
BLAST of EWM27038.1 vs. NCBI_GenBank
Match: gi|551579989|ref|XP_005775553.1| (hypothetical protein EMIHUDRAFT_447832 [Emiliania huxleyi CCMP1516] >gi|485627497|gb|EOD23124.1| hypothetical protein EMIHUDRAFT_447832 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 194.512 bits (493), Expect = 1.839e-55 Identity = 130/335 (38.81%), Postives = 186/335 (55.52%), Query Frame = 0
Query: 2 YMAVGPTLILLNKHILKDLDGHGFNYPMFLSSLGLLSSSLVAHFAVRV------------------------GGF-------------ELPNQA-----RMTRQTYLTTIVPVGICQAATLALGNAVYMFLTVSFIQMLKAFTPVMVLVVGILFQVEAPEAAICMAVMGICLGTSVASYGEVNMNLTGMLLMFSAEFTEAIRLVLVQRFLKSLRFGVVESLYFMSPAGAVCLLCASIMSEFPSMHRNGAFAQVASHPLLFATAGTLGVGVHFLSFMVVQRTNSVTLKVLGTARNAMLVLLSVFWYGELVSSTQFLGYATSIAFFGFYTYCRTRSK 294
Y GP +I++N HI+K L GF YPM LS++GL +++ A+RV GG E+ QA R + + +L ++VP+G+ QA T A GNA YM+LT++F QML AFTP + L++ L VE P A AV+ I G +++SYGE + + G+L + TEA RLVL Q LK R +VES Y+++P GA LL A+ +E P ++ GA+ V +HPL F + LG+ F++F+V++ TNSVTLKVL TARNA VL +V + GE ++ Q GYA S+ F YTY + + K
Sbjct: 98 YSLFGPAVIVVNNHIIKGL---GFPYPMTLSAIGLCTTATFCAVAIRVHPQLATPASQLPLSTLGDPPGAAVGGAYDADSCHDEEEEAEVRYQAARGRWRPSYRFWLRSMVPIGVAQAVTFACGNAAYMYLTITFTQMLSAFTPSVTLLLLYLTGVETPTARATQAVLMIGAGCALSSYGEGHFHPVGVLFRCAGILTEASRLVLTQLLLKRYRLRIVESQYYLAPIGAASLLFAAAFTELPLAYQRGAWGIVTAHPLTFLASALLGLAASFMTFLVIKVTNSVTLKVLNTARNAGFVLFTVTFLGEPATALQLAGYAISLTAFSVYTYYKLQEK 429 The following BLAST results are available for this feature:
BLAST of EWM27038.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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