EWM27072.1, cds3601 (CDS) Nannochloropsis gaditana

Overview
NameEWM27072.1
Unique Namecds3601
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:803859..804010 +
Alignment locationCM002461.1:804163..804601 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27072.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100194g6.7124.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:803859..804010 +
CM002461.1supercontigCM002461.1:804163..804601 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27072.1 vs. NCBI_GenBank
Match: gi|585109247|gb|EWM27072.1| (hypothetical protein Naga_100194g6 [Nannochloropsis gaditana])

HSP 1 Score: 411.764 bits (1057), Expect = 1.182e-145
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0 
Query:    1 MSCGHPGRQGQQSEHRGFHTAAAGKPQTPIVTKTRSERNALTGSQQRMFTLPLRRGAIWSIYLFAIPKQYFKNSSFDCRKLQVNGFDEQSCTAKRIVGMTRLPHCGIYLIDLYLIQTINLRHPTCDDSEAACNSGSKKRNILCLNKIGPTSRCEVSRSRAVDCLFIETNSCSPEELHVRHVCYQTDFRKHKMLILI 196
            MSCGHPGRQGQQSEHRGFHTAAAGKPQTPIVTKTRSERNALTGSQQRMFTLPLRRGAIWSIYLFAIPKQYFKNSSFDCRKLQVNGFDEQSCTAKRIVGMTRLPHCGIYLIDLYLIQTINLRHPTCDDSEAACNSGSKKRNILCLNKIGPTSRCEVSRSRAVDCLFIETNSCSPEELHVRHVCYQTDFRKHKMLILI
Sbjct:    1 MSCGHPGRQGQQSEHRGFHTAAAGKPQTPIVTKTRSERNALTGSQQRMFTLPLRRGAIWSIYLFAIPKQYFKNSSFDCRKLQVNGFDEQSCTAKRIVGMTRLPHCGIYLIDLYLIQTINLRHPTCDDSEAACNSGSKKRNILCLNKIGPTSRCEVSRSRAVDCLFIETNSCSPEELHVRHVCYQTDFRKHKMLILI 196
The following BLAST results are available for this feature:
BLAST of EWM27072.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109247|gb|EWM27072.1|1.182e-145100.00hypothetical protein Naga_100194g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3610rna3610Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications