EWM27068.1, cds3592 (CDS) Nannochloropsis gaditana

Overview
NameEWM27068.1
Unique Namecds3592
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:786631..787695 -

Link to JBrowse

Properties
Property NameValue
Start range786631
Start range.
Protein idEWM27068.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100194g16.7120.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:786631..787695 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27068.1 vs. NCBI_GenBank
Match: gi|585109243|gb|EWM27068.1| (hypothetical protein Naga_100194g16, partial [Nannochloropsis gaditana])

HSP 1 Score: 651.744 bits (1680), Expect = 0.000e+0
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0 
Query:    1 MHRGGGGRNGHGRVCSREADRGGVPAHGKNGYNPDPVLDQGARCETKSFHGREGVIGGGENASCLEKEDLNDRPVRGGTGGESQTERNVFQCGRARETRGHSKGRMDPHVERYASRREGVWEGTSSGGRRDGKAHGAHLGEGGTSVASYNTHDRNGKHARQKLRRGGSWEDLRSCEGPEGAGARSREAGGTGWGGQYRRSPSPGAWGRKERREGRGRWRDREWRQERWRKYRSRSRLPRKGGRRGRSRSSWGRGRERGERWGEEGGRYWHGRGNEGSTRREWGGGRGDGREGGRGRGRGRGRKDGSGEGGSSRPGRRGSRSEASRPGRRGSRAEASRPGRRGSRSESEGYQEGRG 355
            MHRGGGGRNGHGRVCSREADRGGVPAHGKNGYNPDPVLDQGARCETKSFHGREGVIGGGENASCLEKEDLNDRPVRGGTGGESQTERNVFQCGRARETRGHSKGRMDPHVERYASRREGVWEGTSSGGRRDGKAHGAHLGEGGTSVASYNTHDRNGKHARQKLRRGGSWEDLRSCEGPEGAGARSREAGGTGWGGQYRRSPSPGAWGRKERREGRGRWRDREWRQERWRKYRSRSRLPRKGGRRGRSRSSWGRGRERGERWGEEGGRYWHGRGNEGSTRREWGGGRGDGREGGRGRGRGRGRKDGSGEGGSSRPGRRGSRSEASRPGRRGSRAEASRPGRRGSRSESEGYQEGRG
Sbjct:    1 MHRGGGGRNGHGRVCSREADRGGVPAHGKNGYNPDPVLDQGARCETKSFHGREGVIGGGENASCLEKEDLNDRPVRGGTGGESQTERNVFQCGRARETRGHSKGRMDPHVERYASRREGVWEGTSSGGRRDGKAHGAHLGEGGTSVASYNTHDRNGKHARQKLRRGGSWEDLRSCEGPEGAGARSREAGGTGWGGQYRRSPSPGAWGRKERREGRGRWRDREWRQERWRKYRSRSRLPRKGGRRGRSRSSWGRGRERGERWGEEGGRYWHGRGNEGSTRREWGGGRGDGREGGRGRGRGRGRKDGSGEGGSSRPGRRGSRSEASRPGRRGSRAEASRPGRRGSRSESEGYQEGRG 355
The following BLAST results are available for this feature:
BLAST of EWM27068.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109243|gb|EWM27068.1|0.000e+0100.00hypothetical protein Naga_100194g16, partial [Nann... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3601rna3601Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications