EWM27082.1, cds3591 (CDS) Nannochloropsis gaditana

Overview
NameEWM27082.1
Unique Namecds3591
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:785205..785990 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27082.1
ProductProtein kinase, catalytic domain protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100046g49.5121.mrna
GbkeyCDS
End range.
End range785990
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:785205..785990 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0000166nucleotide binding
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006468protein phosphorylation
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR008271Ser/Thr_kinase_AS
IPR000719Prot_kinase_dom
IPR002290Ser/Thr_dual-sp_kinase
Homology
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|585109259|gb|EWM27082.1| (Protein kinase, catalytic domain protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query:    1 PPLPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261
            PPLPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR
Sbjct:    1 PPLPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|676400595|ref|XP_009043575.1| (hypothetical protein AURANDRAFT_69555, partial [Aureococcus anophagefferens] >gi|323444714|gb|EGB01726.1| hypothetical protein AURANDRAFT_69555, partial [Aureococcus anophagefferens])

HSP 1 Score: 265.003 bits (676), Expect = 8.005e-85
Identity = 146/255 (57.25%), Postives = 179/255 (70.20%), Query Frame = 0
Query:    5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPH-VRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEAT--QEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQAL-KMPFFA 255
            Q H CLVFE+ GTSLYDF+K HDY P+   P  VR  +RQLLEAL FL GLRLVHTDLK ENVLL  +G A    +  GR  L      + VIDFGGAT+DD+ RKS+I+NTRQYRAPEVIL +GWS PSDLWS GCI+AEL +G++LFATH+NTEHLAL+ERC+GPFPR ++ +SR  A K+FD    G  RS+W   L  + + HVR MP+L +     +D  +  ++ GLL IDP  RL+A  AL K PF A
Sbjct:   71 QGHFCLVFEKAGTSLYDFLKGHDYAPFG--PRTVRAVSRQLLEALRFLHGLRLVHTDLKLENVLLRRSGVAAPPLDDRGRIELADGDAAIVVIDFGGATYDDE-RKSSIVNTRQYRAPEVILNLGWSTPSDLWSAGCIVAELGRGELLFATHSNTEHLALIERCVGPFPRALVAKSR-YAAKYFD----GDARSKWEAVLPRDGRDHVRAMPKLRDYCG--RDDHLHMLLAGLLTIDPDARLSAADALEKCPFLA 315          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|224012739|ref|XP_002295022.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220969461|gb|EED87802.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 258.84 bits (660), Expect = 3.400e-82
Identity = 144/260 (55.38%), Postives = 182/260 (70.00%), Query Frame = 0
Query:    3 LPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEK-GGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEI-GWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEES-REVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSE-VFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPF 258
            L   H CLVFE LG SLYDF+K H Y+P+P+F  VRDFARQLL AL+FL G  L+HTDLKPEN+LL    E T     G S+ VP STKVKVIDFGGAT+D++ +KSTI+NTRQYRAPEVIL    WS+PSDLWS GCIIAELY G +LFATH N EHLALMER +GPF + +L+ S   +A K FD     +G  +    L + S  HVR+M  + + V + D+ +G+ ++++ LL I+PR+R TA +AL + FF  P 
Sbjct:   77 LSSGHYCLVFECLGRSLYDFLKMHAYRPFPMFC-VRDFARQLLVALDFLHGFGLIHTDLKPENILLTHNEETTYRAWNGSSYRVPVSTKVKVIDFGGATYDNE-KKSTIVNTRQYRAPEVILGFETWSFPSDLWSAGCIIAELYSGGLLFATHQNAEHLALMERAVGPFRKSVLDRSTSSLARKCFD----SRGWHKINGVLSSRSIEHVRKMKPIEQFVLEHDRPTGLGKLLRRLLTIEPRRRATAKEALGLSFFTKPL 330          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|813133485|ref|XP_012197836.1| (CMGC/CLK protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641537378|gb|KDO31231.1| CMGC/CLK protein kinase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 259.996 bits (663), Expect = 1.517e-80
Identity = 131/259 (50.58%), Postives = 179/259 (69.11%), Query Frame = 0
Query:    7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEA--------TQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAG 256
            H  LVFE LG SLYD++K H+Y+P+P+   VR +A QLL +L +LE + L+HTDLKPEN+LLC   E            +  R  + PAS +VK+IDFGGAT+ D+AR S IINTRQYR+PEV+L +GWSYPSD+WS GCIIAELY G++LF+TH N EHLAL+ERC+ PFP+ M+E + + A K+F  +       RW E+  + ES  HVR+M  L E+   + D G++ +++G+L +DP +RL+A  AL+  FF G
Sbjct:  238 HVVLVFETLGGSLYDYLKKHEYKPFPVAS-VRAYAWQLLTSLSYLESISLIHTDLKPENILLCDDAEDPALASMSPMSRRNRRCIVPPASDRVKLIDFGGATYQDEAR-SGIINTRQYRSPEVMLGLGWSYPSDIWSAGCIIAELYLGELLFSTHENLEHLALIERCIAPFPKEMVERAEKQAKKYFTSTSHSL---RWPENAASQESIDHVRKMRPLREIIAPE-DKGLLSLLEGMLTMDPARRLSARDALRHDFFTG 490          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|669155674|ref|XP_008613399.1| (CMGC/CLK protein kinase [Saprolegnia diclina VS20] >gi|530735034|gb|EQC33276.1| CMGC/CLK protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 259.61 bits (662), Expect = 1.955e-80
Identity = 132/259 (50.97%), Postives = 180/259 (69.50%), Query Frame = 0
Query:    7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEA--------TQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAG 256
            H  LVFE LG SLYD++K H+Y+P+P+   VR +A QLL +L +LE + L+HTDLKPEN+LLC   E            +  R  + PAS +VK+IDFGGAT+ D+AR S IINTRQYR+PEV+L +GWSYPSD+WS GCIIAELY G++LF+TH N EHLAL+ERC+ PFP+ M+E + + A K+F  + Q     RW E+  + ES  HVR+M  L E+   + D G++ +++G+L +DP +RL+A  AL+  FF G
Sbjct:  237 HVVLVFETLGGSLYDYLKKHEYKPFPV-ASVRAYAWQLLTSLSYLESISLIHTDLKPENILLCDDTEDPALAPMSPRSRRNRRCIVPPASDRVKLIDFGGATYQDEAR-SGIINTRQYRSPEVMLGLGWSYPSDIWSAGCIIAELYLGELLFSTHENLEHLALIERCIAPFPKEMVERADKQAKKYFTSTSQTL---RWPENAASQESIDHVRKMRPLREIIAPE-DKGLLSLLEGMLTMDPARRLSARDALRHDFFTG 489          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|219122799|ref|XP_002181726.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407002|gb|EEC46940.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 247.669 bits (631), Expect = 2.127e-77
Identity = 130/255 (50.98%), Postives = 176/255 (69.02%), Query Frame = 0
Query:    5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSF--LVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAP-------KFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALK 250
            Q H C+VFE LG SLYDFMK H+Y+ +P+   V+DFA QLLE LEFL   RL+HTDLK ENVLL    E +   G R     VPAST++KVIDFGGA +D++ +KST+INTRQYRAPEVIL  GWS PSD+WS GCI+AELY+G++LF+TH+N EHLAL+ER LGPFPRH++E ++++         +F   +   KGR R    L +E+  +V++   L  +     D   +E+++ +L IDP++R TA + L+
Sbjct:   97 QGHYCIVFESLGPSLYDFMKLHNYKSFPM-ECVQDFAIQLLETLEFLHSFRLIHTDLKIENVLLMNAREVSFSHGDRRHQQYVPASTRIKVIDFGGACYDEE-KKSTVINTRQYRAPEVILGTGWSMPSDIWSTGCILAELYQGELLFSTHDNLEHLALIERTLGPFPRHLVERAKKLGGSSDSSSRRFAREAFDSKGRHRMGRVLSSENAAYVQKAMPLERLIA-SHDDWFLELLRRMLVIDPQERATAHECLQ 348          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1072230259|gb|OEU14992.1| (kinase-like protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 246.128 bits (627), Expect = 1.388e-76
Identity = 128/245 (52.24%), Postives = 172/245 (70.20%), Query Frame = 0
Query:    7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKM 251
            H C+V E LG SLYDF+K   Y P+P++  VRDFA QLLE LE+L   RL+HTDLKPEN+LL   G    ++GG S  +P ST++KVIDFGGAT+D++ +KSTI+NTRQYRAPEVIL +GW  PSDLWSVGCI+AELY+G++LFATH+N EHLAL+E+ +GPFPR ML+ ++ V  +  D +    G  R   +L  E   +V+R   L  +   D+D   + +++ +L IDP +RL A Q L+ 
Sbjct:  131 HYCMVLESLGPSLYDFLKGQKYHPFPIYC-VRDFAEQLLETLEYLHSFRLIHTDLKPENILLL-NGREIPQRGGYS--IPESTRIKVIDFGGATYDNE-KKSTIVNTRQYRAPEVILNVGWGCPSDLWSVGCILAELYQGELLFATHDNIEHLALIEQMIGPFPRRMLKRAKNV--ELVDEAFDSNGAHRM--ELPTEKLAYVKRTAPLESIVY-DEDEWFLRLLRRILVIDPDERLQAHQLLRF 365          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1130670614|ref|XP_019707990.1| (PREDICTED: serine/threonine-protein kinase AFC2 isoform X3 [Elaeis guineensis])

HSP 1 Score: 240.35 bits (612), Expect = 2.457e-75
Identity = 122/261 (46.74%), Postives = 170/261 (65.13%), Query Frame = 0
Query:    5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSG---IVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261
            + H C+VFE+LG SLYDF++ + Y+P+P+   VR+ ARQLLE++ F+  LRL+HTDLKPEN+LL  +       G  S  +P S+ +K+IDFG   +D     S I++TR YRAPEVIL +GWSYP D+WSVGCI+ EL  G+ LF TH N EHLA+MER LGP P+HML+ +   + K+       K R  W E   + ES R V+++PRL  +  +  D     +++++QGL + +P  RLTA +AL+ PFFA  F  R
Sbjct:   47 RNHICIVFEKLGPSLYDFLRKNGYRPFPI-DLVRELARQLLESVAFMHDLRLIHTDLKPENILLVSSEYIKVPDGSYSKRLPKSSAIKLIDFGSTIYDHHDH-SYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRADRHSEKYIR-----KSRLNWPEGATSRESIRAVQKLPRLQNLVMQHVDHSAGDLIDLLQGLFKYEPSDRLTAHEALRHPFFAKDFHRR 300          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1130670612|ref|XP_019707989.1| (PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Elaeis guineensis])

HSP 1 Score: 239.195 bits (609), Expect = 9.844e-75
Identity = 122/261 (46.74%), Postives = 170/261 (65.13%), Query Frame = 0
Query:    5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSG---IVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261
            + H C+VFE+LG SLYDF++ + Y+P+P+   VR+ ARQLLE++ F+  LRL+HTDLKPEN+LL  +       G  S  +P S+ +K+IDFG   +D     S I++TR YRAPEVIL +GWSYP D+WSVGCI+ EL  G+ LF TH N EHLA+MER LGP P+HML+ +   + K+       K R  W E   + ES R V+++PRL  +  +  D     +++++QGL + +P  RLTA +AL+ PFFA  F  R
Sbjct:   66 RNHICIVFEKLGPSLYDFLRKNGYRPFPI-DLVRELARQLLESVAFMHDLRLIHTDLKPENILLVSSEYIKVPDGSYSKRLPKSSAIKLIDFGSTIYDHHDH-SYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRADRHSEKYIR-----KSRLNWPEGATSRESIRAVQKLPRLQNLVMQHVDHSAGDLIDLLQGLFKYEPSDRLTAHEALRHPFFAKDFHRR 319          
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1173947931|gb|OQR96100.1| (serine/threonine protein kinase [Achlya hypogyna])

HSP 1 Score: 248.44 bits (633), Expect = 2.468e-74
Identity = 131/260 (50.38%), Postives = 181/260 (69.62%), Query Frame = 0
Query:    7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGE-----ATQ---EKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRS-RWREDLDA-ESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAG 256
            H  LVFE LG SLYD++K HDY+P+P+   VR +A QLL++L +L+ + L+HTDLKPEN+LLC   E     AT     +  R  + PAS  VK+IDFGGAT+ D+AR   IINTRQYR+PEV+L +GWSYPSD+WS GCIIAELY G++LF+TH N EHLAL+E C+ PFP  M+  + + A K+F       G + RW E+  + ES  HVR+M  L ++  ++ D+G+  +++G+L +DP++RLTA +AL+  FF G
Sbjct:  416 HVVLVFETLGCSLYDYLKKHDYKPFPV-KSVRAYAWQLLKSLTYLQSISLIHTDLKPENILLCNDAEHPDLAATSPRSRRSRRCLIPPASDHVKLIDFGGATYHDEARNG-IINTRQYRSPEVMLGLGWSYPSDIWSAGCIIAELYLGELLFSTHENLEHLALIEACIAPFPPEMVARADKQAKKYF-----TSGHALRWPENASSQESLDHVRKMKPLCDIIAKE-DAGLRGLLEGMLTMDPKRRLTAREALEHDFFKG 667          
The following BLAST results are available for this feature:
BLAST of EWM27082.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109259|gb|EWM27082.1|0.000e+0100.00Protein kinase, catalytic domain protein, partial ... [more]
gi|676400595|ref|XP_009043575.1|8.005e-8557.25hypothetical protein AURANDRAFT_69555, partial [Au... [more]
gi|224012739|ref|XP_002295022.1|3.400e-8255.38predicted protein, partial [Thalassiosira pseudona... [more]
gi|813133485|ref|XP_012197836.1|1.517e-8050.58CMGC/CLK protein kinase [Saprolegnia parasitica CB... [more]
gi|669155674|ref|XP_008613399.1|1.955e-8050.97CMGC/CLK protein kinase [Saprolegnia diclina VS20]... [more]
gi|219122799|ref|XP_002181726.1|2.127e-7750.98predicted protein, partial [Phaeodactylum tricornu... [more]
gi|1072230259|gb|OEU14992.1|1.388e-7652.24kinase-like protein, partial [Fragilariopsis cylin... [more]
gi|1130670614|ref|XP_019707990.1|2.457e-7546.74PREDICTED: serine/threonine-protein kinase AFC2 is... [more]
gi|1130670612|ref|XP_019707989.1|9.844e-7546.74PREDICTED: serine/threonine-protein kinase AFC2 is... [more]
gi|1173947931|gb|OQR96100.1|2.468e-7450.38serine/threonine protein kinase [Achlya hypogyna][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3600rna3600Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications