EWM27082.1, cds3591 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|585109259|gb|EWM27082.1| (Protein kinase, catalytic domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 540.421 bits (1391), Expect = 0.000e+0 Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0 Query: 1 PPLPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261 PPLPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR Sbjct: 1 PPLPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|676400595|ref|XP_009043575.1| (hypothetical protein AURANDRAFT_69555, partial [Aureococcus anophagefferens] >gi|323444714|gb|EGB01726.1| hypothetical protein AURANDRAFT_69555, partial [Aureococcus anophagefferens]) HSP 1 Score: 265.003 bits (676), Expect = 8.005e-85 Identity = 146/255 (57.25%), Postives = 179/255 (70.20%), Query Frame = 0 Query: 5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPH-VRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEAT--QEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQAL-KMPFFA 255 Q H CLVFE+ GTSLYDF+K HDY P+ P VR +RQLLEAL FL GLRLVHTDLK ENVLL +G A + GR L + VIDFGGAT+DD+ RKS+I+NTRQYRAPEVIL +GWS PSDLWS GCI+AEL +G++LFATH+NTEHLAL+ERC+GPFPR ++ +SR A K+FD G RS+W L + + HVR MP+L + +D + ++ GLL IDP RL+A AL K PF A Sbjct: 71 QGHFCLVFEKAGTSLYDFLKGHDYAPFG--PRTVRAVSRQLLEALRFLHGLRLVHTDLKLENVLLRRSGVAAPPLDDRGRIELADGDAAIVVIDFGGATYDDE-RKSSIVNTRQYRAPEVILNLGWSTPSDLWSAGCIVAELGRGELLFATHSNTEHLALIERCVGPFPRALVAKSR-YAAKYFD----GDARSKWEAVLPRDGRDHVRAMPKLRDYCG--RDDHLHMLLAGLLTIDPDARLSAADALEKCPFLA 315
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|224012739|ref|XP_002295022.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220969461|gb|EED87802.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 258.84 bits (660), Expect = 3.400e-82 Identity = 144/260 (55.38%), Postives = 182/260 (70.00%), Query Frame = 0 Query: 3 LPQEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEK-GGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEI-GWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEES-REVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSE-VFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAGPF 258 L H CLVFE LG SLYDF+K H Y+P+P+F VRDFARQLL AL+FL G L+HTDLKPEN+LL E T G S+ VP STKVKVIDFGGAT+D++ +KSTI+NTRQYRAPEVIL WS+PSDLWS GCIIAELY G +LFATH N EHLALMER +GPF + +L+ S +A K FD +G + L + S HVR+M + + V + D+ +G+ ++++ LL I+PR+R TA +AL + FF P Sbjct: 77 LSSGHYCLVFECLGRSLYDFLKMHAYRPFPMFC-VRDFARQLLVALDFLHGFGLIHTDLKPENILLTHNEETTYRAWNGSSYRVPVSTKVKVIDFGGATYDNE-KKSTIVNTRQYRAPEVILGFETWSFPSDLWSAGCIIAELYSGGLLFATHQNAEHLALMERAVGPFRKSVLDRSTSSLARKCFD----SRGWHKINGVLSSRSIEHVRKMKPIEQFVLEHDRPTGLGKLLRRLLTIEPRRRATAKEALGLSFFTKPL 330
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|813133485|ref|XP_012197836.1| (CMGC/CLK protein kinase [Saprolegnia parasitica CBS 223.65] >gi|641537378|gb|KDO31231.1| CMGC/CLK protein kinase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 259.996 bits (663), Expect = 1.517e-80 Identity = 131/259 (50.58%), Postives = 179/259 (69.11%), Query Frame = 0 Query: 7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEA--------TQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAG 256 H LVFE LG SLYD++K H+Y+P+P+ VR +A QLL +L +LE + L+HTDLKPEN+LLC E + R + PAS +VK+IDFGGAT+ D+AR S IINTRQYR+PEV+L +GWSYPSD+WS GCIIAELY G++LF+TH N EHLAL+ERC+ PFP+ M+E + + A K+F + RW E+ + ES HVR+M L E+ + D G++ +++G+L +DP +RL+A AL+ FF G Sbjct: 238 HVVLVFETLGGSLYDYLKKHEYKPFPVAS-VRAYAWQLLTSLSYLESISLIHTDLKPENILLCDDAEDPALASMSPMSRRNRRCIVPPASDRVKLIDFGGATYQDEAR-SGIINTRQYRSPEVMLGLGWSYPSDIWSAGCIIAELYLGELLFSTHENLEHLALIERCIAPFPKEMVERAEKQAKKYFTSTSHSL---RWPENAASQESIDHVRKMRPLREIIAPE-DKGLLSLLEGMLTMDPARRLSARDALRHDFFTG 490
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|669155674|ref|XP_008613399.1| (CMGC/CLK protein kinase [Saprolegnia diclina VS20] >gi|530735034|gb|EQC33276.1| CMGC/CLK protein kinase [Saprolegnia diclina VS20]) HSP 1 Score: 259.61 bits (662), Expect = 1.955e-80 Identity = 132/259 (50.97%), Postives = 180/259 (69.50%), Query Frame = 0 Query: 7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEA--------TQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAG 256 H LVFE LG SLYD++K H+Y+P+P+ VR +A QLL +L +LE + L+HTDLKPEN+LLC E + R + PAS +VK+IDFGGAT+ D+AR S IINTRQYR+PEV+L +GWSYPSD+WS GCIIAELY G++LF+TH N EHLAL+ERC+ PFP+ M+E + + A K+F + Q RW E+ + ES HVR+M L E+ + D G++ +++G+L +DP +RL+A AL+ FF G Sbjct: 237 HVVLVFETLGGSLYDYLKKHEYKPFPV-ASVRAYAWQLLTSLSYLESISLIHTDLKPENILLCDDTEDPALAPMSPRSRRNRRCIVPPASDRVKLIDFGGATYQDEAR-SGIINTRQYRSPEVMLGLGWSYPSDIWSAGCIIAELYLGELLFSTHENLEHLALIERCIAPFPKEMVERADKQAKKYFTSTSQTL---RWPENAASQESIDHVRKMRPLREIIAPE-DKGLLSLLEGMLTMDPARRLSARDALRHDFFTG 489
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|219122799|ref|XP_002181726.1| (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407002|gb|EEC46940.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 247.669 bits (631), Expect = 2.127e-77 Identity = 130/255 (50.98%), Postives = 176/255 (69.02%), Query Frame = 0 Query: 5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSF--LVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAP-------KFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALK 250 Q H C+VFE LG SLYDFMK H+Y+ +P+ V+DFA QLLE LEFL RL+HTDLK ENVLL E + G R VPAST++KVIDFGGA +D++ +KST+INTRQYRAPEVIL GWS PSD+WS GCI+AELY+G++LF+TH+N EHLAL+ER LGPFPRH++E ++++ +F + KGR R L +E+ +V++ L + D +E+++ +L IDP++R TA + L+ Sbjct: 97 QGHYCIVFESLGPSLYDFMKLHNYKSFPM-ECVQDFAIQLLETLEFLHSFRLIHTDLKIENVLLMNAREVSFSHGDRRHQQYVPASTRIKVIDFGGACYDEE-KKSTVINTRQYRAPEVILGTGWSMPSDIWSTGCILAELYQGELLFSTHDNLEHLALIERTLGPFPRHLVERAKKLGGSSDSSSRRFAREAFDSKGRHRMGRVLSSENAAYVQKAMPLERLIA-SHDDWFLELLRRMLVIDPQERATAHECLQ 348
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1072230259|gb|OEU14992.1| (kinase-like protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 246.128 bits (627), Expect = 1.388e-76 Identity = 128/245 (52.24%), Postives = 172/245 (70.20%), Query Frame = 0 Query: 7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDAESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKM 251 H C+V E LG SLYDF+K Y P+P++ VRDFA QLLE LE+L RL+HTDLKPEN+LL G ++GG S +P ST++KVIDFGGAT+D++ +KSTI+NTRQYRAPEVIL +GW PSDLWSVGCI+AELY+G++LFATH+N EHLAL+E+ +GPFPR ML+ ++ V + D + G R +L E +V+R L + D+D + +++ +L IDP +RL A Q L+ Sbjct: 131 HYCMVLESLGPSLYDFLKGQKYHPFPIYC-VRDFAEQLLETLEYLHSFRLIHTDLKPENILLL-NGREIPQRGGYS--IPESTRIKVIDFGGATYDNE-KKSTIVNTRQYRAPEVILNVGWGCPSDLWSVGCILAELYQGELLFATHDNIEHLALIEQMIGPFPRRMLKRAKNV--ELVDEAFDSNGAHRM--ELPTEKLAYVKRTAPLESIVY-DEDEWFLRLLRRILVIDPDERLQAHQLLRF 365
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1130670614|ref|XP_019707990.1| (PREDICTED: serine/threonine-protein kinase AFC2 isoform X3 [Elaeis guineensis]) HSP 1 Score: 240.35 bits (612), Expect = 2.457e-75 Identity = 122/261 (46.74%), Postives = 170/261 (65.13%), Query Frame = 0 Query: 5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSG---IVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261 + H C+VFE+LG SLYDF++ + Y+P+P+ VR+ ARQLLE++ F+ LRL+HTDLKPEN+LL + G S +P S+ +K+IDFG +D S I++TR YRAPEVIL +GWSYP D+WSVGCI+ EL G+ LF TH N EHLA+MER LGP P+HML+ + + K+ K R W E + ES R V+++PRL + + D +++++QGL + +P RLTA +AL+ PFFA F R Sbjct: 47 RNHICIVFEKLGPSLYDFLRKNGYRPFPI-DLVRELARQLLESVAFMHDLRLIHTDLKPENILLVSSEYIKVPDGSYSKRLPKSSAIKLIDFGSTIYDHHDH-SYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRADRHSEKYIR-----KSRLNWPEGATSRESIRAVQKLPRLQNLVMQHVDHSAGDLIDLLQGLFKYEPSDRLTAHEALRHPFFAKDFHRR 300
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1130670612|ref|XP_019707989.1| (PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Elaeis guineensis]) HSP 1 Score: 239.195 bits (609), Expect = 9.844e-75 Identity = 122/261 (46.74%), Postives = 170/261 (65.13%), Query Frame = 0 Query: 5 QEHCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGEATQEKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRSRWREDLDA-ESQRHVRRMPRLSEVFQEDKDSG---IVEVVQGLLEIDPRKRLTATQALKMPFFAGPFDGR 261 + H C+VFE+LG SLYDF++ + Y+P+P+ VR+ ARQLLE++ F+ LRL+HTDLKPEN+LL + G S +P S+ +K+IDFG +D S I++TR YRAPEVIL +GWSYP D+WSVGCI+ EL G+ LF TH N EHLA+MER LGP P+HML+ + + K+ K R W E + ES R V+++PRL + + D +++++QGL + +P RLTA +AL+ PFFA F R Sbjct: 66 RNHICIVFEKLGPSLYDFLRKNGYRPFPI-DLVRELARQLLESVAFMHDLRLIHTDLKPENILLVSSEYIKVPDGSYSKRLPKSSAIKLIDFGSTIYDHHDH-SYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCSGEALFQTHENLEHLAMMERVLGPLPQHMLKRADRHSEKYIR-----KSRLNWPEGATSRESIRAVQKLPRLQNLVMQHVDHSAGDLIDLLQGLFKYEPSDRLTAHEALRHPFFAKDFHRR 319
BLAST of EWM27082.1 vs. NCBI_GenBank
Match: gi|1173947931|gb|OQR96100.1| (serine/threonine protein kinase [Achlya hypogyna]) HSP 1 Score: 248.44 bits (633), Expect = 2.468e-74 Identity = 131/260 (50.38%), Postives = 181/260 (69.62%), Query Frame = 0 Query: 7 HCCLVFERLGTSLYDFMKAHDYQPYPLFPHVRDFARQLLEALEFLEGLRLVHTDLKPENVLLCGTGE-----ATQ---EKGGRSFLVPASTKVKVIDFGGATFDDDARKSTIINTRQYRAPEVILEIGWSYPSDLWSVGCIIAELYKGDVLFATHNNTEHLALMERCLGPFPRHMLEESREVAPKFFDMSPQGKGRS-RWREDLDA-ESQRHVRRMPRLSEVFQEDKDSGIVEVVQGLLEIDPRKRLTATQALKMPFFAG 256 H LVFE LG SLYD++K HDY+P+P+ VR +A QLL++L +L+ + L+HTDLKPEN+LLC E AT + R + PAS VK+IDFGGAT+ D+AR IINTRQYR+PEV+L +GWSYPSD+WS GCIIAELY G++LF+TH N EHLAL+E C+ PFP M+ + + A K+F G + RW E+ + ES HVR+M L ++ ++ D+G+ +++G+L +DP++RLTA +AL+ FF G Sbjct: 416 HVVLVFETLGCSLYDYLKKHDYKPFPV-KSVRAYAWQLLKSLTYLQSISLIHTDLKPENILLCNDAEHPDLAATSPRSRRSRRCLIPPASDHVKLIDFGGATYHDEARNG-IINTRQYRSPEVMLGLGWSYPSDIWSAGCIIAELYLGELLFSTHENLEHLALIEACIAPFPPEMVARADKQAKKYF-----TSGHALRWPENASSQESLDHVRKMKPLCDIIAKE-DAGLRGLLEGMLTMDPKRRLTAREALEHDFFKG 667 The following BLAST results are available for this feature:
BLAST of EWM27082.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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