EWM27110.1, cds3583 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|585109287|gb|EWM27110.1| (dtw domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 678.322 bits (1749), Expect = 0.000e+0 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
Query: 1 MLTSSPPPPATTTYTPSISTPATDHIDTSASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRSKQRLEAVAKKSKREILQKEGGVHHGSKEAIEDT 327
MLTSSPPPPATTTYTPSISTPATDHIDTSASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRSKQRLEAVAKKSKREILQKEGGVHHGSKEAIEDT
Sbjct: 1 MLTSSPPPPATTTYTPSISTPATDHIDTSASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRSKQRLEAVAKKSKREILQKEGGVHHGSKEAIEDT 327
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|553191367|ref|XP_005855368.1| (dtw domain containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293694|gb|EKU20994.1| dtw domain containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 677.552 bits (1747), Expect = 0.000e+0 Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0
Query: 1 MLTSSPPPPATTTYTPSISTPATDHIDTSASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRSKQRLEAVAKKSKREILQKEGGVHHGSKEAIEDT 327
MLTSSPPPPATTTYTPSISTPATDHIDTSASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRSKQRLEAVAKKSKREILQKEGGVHHGSKEAIEDT
Sbjct: 8 MLTSSPPPPATTTYTPSISTPATDHIDTSASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRSKQRLEAVAKKSKREILQKEGGVHHGSKEAIEDT 334
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|299470035|emb|CBN79212.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 147.517 bits (371), Expect = 5.525e-38 Identity = 88/267 (32.96%), Postives = 148/267 (55.43%), Query Frame = 0
Query: 29 SASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVP-RLRLPLEVNIII-ADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGAR---KNLPLPMEAAGKARIK 290
+++++ YL P I+ W + H C R YC C+ VG P GV+ P LRLPL+V++++ A+ R++S+ + V V+A +SVRV G ++L++ + + V+FPS +V + +S E+L ++RV+++DSRW NT V+ HP ++ L + V+++ PP S WR+H++GEG + +AEA Y KD+E +A VT LE+I+ +F L + IK +Y K+ P EA + R++
Sbjct: 8 ASAMEEYLERPPD--INLWPQGRQECHRCGKRVRLYCPDCLILVGTPDGVETPTELRLPLQVDVVVTAEERRRSSGVHVAVMAPQSVRVVSFEGSGGDDLSSCSYRPESDFVVFPSAASVCWSELSEEDLARVRRVILIDSRWVNTGAVVGHPKLKGL-RHVRIREPPAVSQFWRWHTEGEGHICTAEATYLVLKDFE-------EATGLVTRGG--------RLEDILFLFALMGSRIKAAYESDPSKLGKSCPSSEEAKQRRRVR 256
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|1173933754|gb|OQR85352.1| (hypothetical protein ACHHYP_11913 [Achlya hypogyna]) HSP 1 Score: 137.887 bits (346), Expect = 1.826e-34 Identity = 87/268 (32.46%), Postives = 137/268 (51.12%), Query Frame = 0
Query: 47 WVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLP-LPMEAAGKARIKAHRSKQRLEAVAKKSKREILQKE 313
W +A CP+ C +FYCA C +G P GV VPR+RLP++V+I+ D KKSTA Q VVA + + + E A ++ + +V++PS DA+ L+ E++ I+ ++ +D W T+L+HP V L + VKL PP S WRYHS GEG +S+ EA+Y ++Y +R S+T+ G +++ F + +VI E++ + L PM A K + S++ K RE +K+
Sbjct: 14 WSRAVCPN--CKKSNKFYCATCFVPIGAPNGVAVPRIRLPVKVDILFHDKIKKSTAPQGKVVAPDDIEIIQF---PYAEGKAPAYDAAKAVVVYPSNDALVLD--DLEDIDQIETLIFIDCPWQKGPTILNHPSVAHL-RAVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYLTALQKR-NLTPSMTDPVGG----------LLYFFNIVHDVILETHKTDPNRQLERAPMSEAAKELQRLRHSQKEAGRKRKLENREAHKKK 262
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|1173959268|gb|OQS05521.1| (hypothetical protein THRCLA_02371 [Thraustotheca clavata]) HSP 1 Score: 137.117 bits (344), Expect = 2.767e-34 Identity = 88/266 (33.08%), Postives = 134/266 (50.38%), Query Frame = 0
Query: 44 IDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLP-LPMEAAGKARIKAHRSKQRLEAVAKKSKRE 308
+D W +A CP C +FYCA C VGVP VP +RLPL+V+I+ D KKSTA Q V+A + + + LA +P + +V++PS DA+ L + ++L I ++ +D W +L+ + L + VKL PP S WRYHS GEG +S+ EA+Y ++Y H R + SS N + ++++ F + +VI E++ + L PM K R + RS++ L KK KRE
Sbjct: 1 MDAWTRAPCPE--CKKSSKFYCATCCVSVGVPENTTVPCIRLPLKVDILFQDKLKKSTAPQGKVIAPQDIAIVPFPYVDGHTLAYDP---SKCVVVYPSNDALVLEEL--DDLASIDTLIFIDCPWQKGPAILNDSSISHL-RSVKLAKPPLHSKFWRYHSSGEGCISTIEAVYLMLEEYSAACHAR-----DIPLSSTDN------VADLLYFFHMIHDVILETHKSNPNRQLERAPMSEEEKNRQRIMRSQKEL---GKKRKRE 244
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|673023016|ref|XP_008865469.1| (hypothetical protein H310_03411 [Aphanomyces invadans] >gi|574478697|gb|ETW05692.1| hypothetical protein H310_03411 [Aphanomyces invadans]) HSP 1 Score: 135.576 bits (340), Expect = 2.104e-33 Identity = 87/277 (31.41%), Postives = 145/277 (52.35%), Query Frame = 0
Query: 21 PATDHIDTSASLQAYLAAPLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLP-LPMEAAGKARIKAHRSKQ 296
PAT D +A+ + + P P +W + CP GC ++YCA C +G P V VPR+RLPL+V+I+ D +KKSTA VVA + + + E + ++ E +V++PS DA ++ + E+L +K ++ +D+ W TVL+ P + L + VKL PP ES WRYHS G+G +S+ EA++ E++ + +AV S+T + L+ ++ F L + I ++ ++ + PM A K R + RS++
Sbjct: 7 PATRLADETATAEVAKSNPAP---GEWTRELCP--GCNKSCKYYCAVCYLPIGAPLTVDVPRIRLPLQVDILFQDKQKKSTAPHGKVVAPDDIAIIPY---PFPEESRPQYDAKEAVVVYPSIDAYVIDEL--EDLDSLKTLIFIDTPWQKAPTVLNDPALSHL-RCVKLARPPLESKYWRYHSSGKGCISTIEAVHLLL--VEYVAAKAQRAVASMTTVAPATPS---CLDPLLFFFHLVHDHIMHTHKTDPKRQIDRAPMSEAEKERQRLMRSQK 267
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|813113005|ref|XP_012195308.1| (hypothetical protein SPRG_19115 [Saprolegnia parasitica CBS 223.65] >gi|641540515|gb|KDO34297.1| hypothetical protein SPRG_19115 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.109 bits (331), Expect = 1.885e-32 Identity = 82/263 (31.18%), Postives = 134/263 (50.95%), Query Frame = 0
Query: 47 WVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLP-LPMEAAGKARIKAHRSKQRLEAVAKKSKRE 308
W + CP+ C +FYCA C +G P+ V VPR++LP+ +++I D KKSTA Q VVA E + + ++ A+ ++ + +V++PS DA L+ + E+L ++ ++ +D W +L+ + L + VKL PP S WRYHS G+G +S+ EA+Y ++Y H R A+ S + S EI++ F L + I E++ + L PM A K R + RS++ K+ RE
Sbjct: 7 WTREVCPT--CKKSSKFYCATCFLSLGAPSDVHVPRIKLPVTIDVIFHDKIKKSTAPQGKVVAPEDIHI---IPFPYKDGASPVYDPAKAVVVYPSNDAFVLDEL--EDLDQLETLIFIDCPWQKGPAILNDKSLSHL-RTVKLAKPPLHSKFWRYHSSGDGCVSTIEAVYLMLEEYTAAMHARNLALTSTDDVS-----------EILYYFNLVHDTILETHKSDPNRQLDRAPMSEAEKERQRLLRSQKEQGQKRKRENRE 250
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|669152678|ref|XP_008611901.1| (hypothetical protein SDRG_07823 [Saprolegnia diclina VS20] >gi|530736253|gb|EQC34495.1| hypothetical protein SDRG_07823 [Saprolegnia diclina VS20]) HSP 1 Score: 131.339 bits (329), Expect = 3.638e-32 Identity = 81/267 (30.34%), Postives = 136/267 (50.94%), Query Frame = 0
Query: 43 AIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLP-LPMEAAGKARIKAHRSKQRLEAVAKKSKRE 308
A+ W + CP+ C +FYCA C +G P+ V VPR++LP+ V++I D KKSTA Q VVA + + + ++ A+ ++ + ++++PS DA+ L+ + E+L ++ ++ +D W +L+ + L + VKL PP S WRYHS G+G +S+ EA+Y ++Y H R A+ S + S EI++ F L + I E++ + L PM A K R + R ++ K+ RE
Sbjct: 3 AVAGWTREVCPT--CKKSSKFYCATCFLSLGAPSDVDVPRIKLPVTVDVIFHDKIKKSTAPQGKVVAPDDIHI---IPFPYKDGASPVYDPSKAVIVYPSNDALVLDEL--EDLDQLETLIFIDCPWQKGPAILNDKSLSHL-RAVKLAKPPLHSKFWRYHSSGDGCVSTIEAVYLMLEEYTAAMHARNLALTSTDDVS-----------EILYYFNLVHDTILETHKSDPNRQLDRAPMSEAEKERQRLLRCQKEQGQKRKRENRE 250
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|301103502|ref|XP_002900837.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262101592|gb|EEY59644.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 125.946 bits (315), Expect = 7.612e-30 Identity = 85/259 (32.82%), Postives = 129/259 (49.81%), Query Frame = 0
Query: 47 WVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRVWDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRS------KQRLE 299
W + C S C +FYC KC +G P V VP L+LPL+V++ D KKSTA V+A + V++ G E L + + +V++PS +A TL ++ EEL I+ ++ +D W ++ P + L + VKL PP+ES WRYH G G +S+ EA+ ++Y R A S+ E S ED + L +++ F+L + I E + A PM+A K R + S K+RLE
Sbjct: 15 WTRGPCTS--CQRSYKFYCPKCNIPLGAPDNVTVPALKLPLQVHVWFQDKIKKSTAPHAKVLAPQDVQIVPYPAKGGETLPT--YTRENAVVVYPSFEAETLEQINAEELRDIRTLIFIDCPWQKAPVIMTDPAITDL-RHVKLAQPPKESNFWRYHKAGAGCVSTIEAIQLMLEEYTAAAKR---AEISLPEGS---EDTQ--LSDLLFFFKLQFSRIAEHFETEADPERKPPMDADEKERRRLMYSQKDKGKKRRLE 260
BLAST of EWM27110.1 vs. NCBI_GenBank
Match: gi|675174321|ref|XP_008896045.1| (hypothetical protein PPTG_03991 [Phytophthora parasitica INRA-310] >gi|568103707|gb|ETN18364.1| hypothetical protein PPTG_03991 [Phytophthora parasitica INRA-310] >gi|570317059|gb|ETO65007.1| hypothetical protein F444_17599 [Phytophthora parasitica P1976]) HSP 1 Score: 122.094 bits (305), Expect = 1.827e-28 Identity = 87/269 (32.34%), Postives = 133/269 (49.44%), Query Frame = 0
Query: 39 PLPYAIDDWVKAACPSHGCTAEKRFYCAKCVCWVGVPAGVQVPRLRLPLEVNIIIADNRKKSTAIQVGVVATESVRV--WDTWTGGLEELAAEPWEVDETLVLFPSQDAVTLNAMSFEELTVIKRVVVLDSRWNNTTTVLDHPGVRRLTKRVKLKNPPQESLCWRYHSKGEGLLSSAEALYYFFKDYEWLTHRRVKAVHSVTESSGQNEDGEVMLEEIMHIFRLNINVIKESYNKGARKNLPLPMEAAGKARIKAHRS------KQRLE 299
PL W + C S C +FYC KC +GVP V VP L+LPL+V++ D KKSTA V+A + V++ + GG + + +V++PS +A TL ++ EEL I+ ++ +D W ++ P + L + VKL PP+ES WRYH G G +S+ EA+ ++Y T KA ++ E S ED + L +++ F+L + I E + A PM+A K R + S K+RLE
Sbjct: 10 PLEEQPKAWARVPCTS--CQRSYKFYCPKCNITLGVPENVTVPALKLPLQVHVWFQDKIKKSTAPHAKVLAPQDVQIVPYPAAKGG---DVLPTYTRENAVVVYPSFEAETLEQINAEELRDIRTLIFIDCPWQKAPVIMTDPAIADL-RHVKLARPPKESNFWRYHKAGAGCVSTIEAIQLMLEEY---TIAAKKAKIALPEGS---EDAQ--LSDLLFFFKLQFSRIVEHFETEADPERKPPMDANEKERRRLMYSQKEKGKKRRLE 264 The following BLAST results are available for this feature:
BLAST of EWM27110.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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