EWM27088.1, cds3581 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|585109265|gb|EWM27088.1| (Frataxin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 421.779 bits (1083), Expect = 1.922e-149 Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 0
Query: 1 MIARRFSILTRSLARSCKSMTSISVTQVSQAVAGAARPSKALWGAYRKPLSESQQQVCPRSPFYCAQATLFSHFVSSSSRTNAEEVQNQGGFPTERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRTRT 203
MIARRFSILTRSLARSCKSMTSISVTQVSQAVAGAARPSKALWGAYRKPLSESQQQVCPRSPFYCAQATLFSHFVSSSSRTNAEEVQNQGGFPTERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRTRT
Sbjct: 1 MIARRFSILTRSLARSCKSMTSISVTQVSQAVAGAARPSKALWGAYRKPLSESQQQVCPRSPFYCAQATLFSHFVSSSSRTNAEEVQNQGGFPTERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRTRT 203
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|570983234|gb|ETP43103.1| (hypothetical protein F442_10037 [Phytophthora parasitica P10297]) HSP 1 Score: 133.65 bits (335), Expect = 3.446e-36 Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0
Query: 94 TERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRT 201
TE +F +ADETL ++Q+ +D +E+++E+ + SQGVL I +G HGTWV+N+Q PNRQIWWSSP+SGP R+EYD + WV TRDR EL LLR E+ GI+I T
Sbjct: 62 TENEFMELADETLHDIQSWLDGIEEMIEESDIMFSQGVLKIDLGEHGTWVINRQVPNRQIWWSSPVSGPRRYEYDAESGHWVNTRDRGELMELLRTEILDKTGIEIYT 169
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|675168671|ref|XP_008893220.1| (hypothetical protein PPTG_01604 [Phytophthora parasitica INRA-310] >gi|566022311|gb|ETI45222.1| hypothetical protein F443_10129 [Phytophthora parasitica P1569] >gi|567988359|gb|ETL38637.1| hypothetical protein L916_09826 [Phytophthora parasitica] >gi|568017560|gb|ETL91737.1| hypothetical protein L917_09744 [Phytophthora parasitica] >gi|568047966|gb|ETM45034.1| hypothetical protein L914_09797 [Phytophthora parasitica] >gi|568106792|gb|ETN21422.1| hypothetical protein PPTG_01604 [Phytophthora parasitica INRA-310] >gi|570325939|gb|ETO73887.1| hypothetical protein F444_10226 [Phytophthora parasitica P1976] >gi|570949779|gb|ETP15036.1| hypothetical protein F441_10070 [Phytophthora parasitica CJ01A1] >gi|970631717|gb|KUF78234.1| Frataxin [Phytophthora nicotianae] >gi|970650874|gb|KUF89802.1| hypothetical protein AM588_10002428 [Phytophthora nicotianae]) HSP 1 Score: 132.88 bits (333), Expect = 6.255e-36 Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0
Query: 94 TERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRT 201
TE +F +ADETL ++Q+ +D +E+++E+ + SQGVL I +G HGTWV+N+Q PNRQIWWSSP+SGP R+EYD + WV TRDR EL LLR E+ GI+I T
Sbjct: 62 TENEFMELADETLHDIQSWLDGIEEMLEESDIMFSQGVLKIDLGEHGTWVINRQVPNRQIWWSSPVSGPRRYEYDAESGHWVNTRDRGELMELLRTEILDKTGIEIYT 169
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|567959620|gb|ETK85189.1| (hypothetical protein L915_09916 [Phytophthora parasitica]) HSP 1 Score: 132.88 bits (333), Expect = 7.046e-36 Identity = 59/108 (54.63%), Postives = 79/108 (73.15%), Query Frame = 0
Query: 94 TERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRT 201
TE +F +ADETL ++Q+ +D +E+++E+ + SQGVL I +G HGTWV+N+Q PNRQIWWSSP+SGP R+EYD + WV TRDR EL LLR E+ GI+I T
Sbjct: 62 TENEFMELADETLHDIQSWLDGIEEMLEESDIMFSQGVLKIDLGEHGTWVINRQVPNRQIWWSSPVSGPRRYEYDAESGHWVNTRDRGELMELLRTEILDKTGIEIYT 169
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|301120466|ref|XP_002907960.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262102991|gb|EEY61043.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 130.954 bits (328), Expect = 1.398e-35 Identity = 58/107 (54.21%), Postives = 78/107 (72.90%), Query Frame = 0
Query: 95 ERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRT 201
E +F +ADETL +Q+ +D +E+++E+ + SQGVL I +G HGTWV+N+Q PNRQIWWSSP+SGP R+EYD + WV TRD+ EL LLR E+ V GI+I T
Sbjct: 25 ENEFMELADETLHGIQSWLDGIEEMLEESDIMFSQGVLKIDLGEHGTWVINRQVPNRQIWWSSPVSGPRRYEYDAESGHWVNTRDKGELMELLRAEILDVTGIEIYT 131
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|695414100|ref|XP_009526214.1| (hypothetical protein PHYSODRAFT_354548 [Phytophthora sojae] >gi|348677339|gb|EGZ17156.1| hypothetical protein PHYSODRAFT_354548 [Phytophthora sojae]) HSP 1 Score: 131.339 bits (329), Expect = 3.306e-35 Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 0
Query: 94 TERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDI 199
TE +F +ADETL ++Q+ +D +E+++E+ + SQGVL I +G HGTWV+N+Q PNRQIWWSSP+SGP R+EYD + WV TRDR EL LLR E+ GI+I
Sbjct: 63 TEHEFMELADETLHDIQSWLDGIEEMLEESDVMFSQGVLKIDLGDHGTWVINRQVPNRQIWWSSPISGPRRYEYDGESGNWVNTRDRGELVELLRSEILDATGIEI 168
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|1210520499|dbj|GAX20657.1| (hypothetical protein FisN_32Hu042 [Fistulifera solaris]) HSP 1 Score: 125.176 bits (313), Expect = 1.811e-33 Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = 0
Query: 92 FPTERDFHVVADETLDEVQASVD-ALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRV 194
F TE +FH VADE L+ +Q +VD LE DYE NL+ GVL + M PHGTWVLNKQTPNRQIWWSSPLSGP RFE+D K+W +T+D L L +E+ V
Sbjct: 9 FETEAEFHNVADEALETIQDTVDEMLEPKNIDYEINLASGVLTLKMRPHGTWVLNKQTPNRQIWWSSPLSGPKRFEFDPKDKLWFSTKDGLNLGRTLMQEIHHV 112
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|299115807|emb|CBN74370.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 126.716 bits (317), Expect = 2.233e-32 Identity = 63/120 (52.50%), Postives = 83/120 (69.17%), Query Frame = 0
Query: 86 VQNQGGFPT---ERDFHVVADETLDEVQASVD-ALEDVVED-YEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRD-RRELFALLREEVKRVAGIDI 199
+Q QG T E++FH VADE L+E+ +V+ ALE+ ED ++ N+SQGVLNI +G GTWVLNKQ+PNRQIWWSSP+SGP+RFEY K W+ TRD EL +L E+ G+ +
Sbjct: 142 MQRQGMSSTTMSEQEFHSVADEALEEIHDAVEEALEEGFEDDFDCNMSQGVLNIAVGDRGTWVLNKQSPNRQIWWSSPISGPMRFEYHEEAKRWLNTRDGETELRVILATEMSEKCGVSV 261
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|1214698702|gb|OWZ11662.1| (Iron donor protein CyaY [Phytophthora megakarya]) HSP 1 Score: 123.635 bits (309), Expect = 2.763e-32 Identity = 64/147 (43.54%), Postives = 87/147 (59.18%), Query Frame = 0
Query: 58 CPRSPFYCAQATLFSHFVSSSSRTNAEEVQNQGGFP---TERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRT 201
PR + A F + R N +V P TE +F +ADETL ++Q+ +D +E+++E+ + S VL I +G HGTWV+N+Q PNRQIWWSSP+SGP R+E D + WV TRDR EL LLR E+ GI+I T
Sbjct: 19 APRFKKFSALPYFFRPNSAMMMRRNPLQVAPFSTAPPTMTENEFMELADETLHDIQSWLDGIEEMLEESDIMFSVRVLKIDLGDHGTWVINRQVPNRQIWWSSPISGPRRYELDAESGHWVNTRDRGELTELLRTEILEATGIEIYT 165
BLAST of EWM27088.1 vs. NCBI_GenBank
Match: gi|953497860|emb|CEG40620.1| (iron donor protein [Plasmopara halstedii]) HSP 1 Score: 120.939 bits (302), Expect = 6.207e-32 Identity = 54/108 (50.00%), Postives = 77/108 (71.30%), Query Frame = 0
Query: 94 TERDFHVVADETLDEVQASVDALEDVVEDYEANLSQGVLNIGMGPHGTWVLNKQTPNRQIWWSSPLSGPLRFEYDVATKMWVTTRDRRELFALLREEVKRVAGIDIRT 201
TE +F +AD+TL ++Q+ +D +E+++E+ + S GVL I +G +GTWV+N+Q PNRQIWWSSP+SGP R+EYD + WV TRD+ EL LL E+ GI+I T
Sbjct: 2 TEHEFMELADKTLFDIQSWLDGIEEMLEECDVMFSVGVLKIDLGEYGTWVINRQVPNRQIWWSSPISGPRRYEYDAERRAWVNTRDKGELKELLHTEILEATGIEIYT 109 The following BLAST results are available for this feature:
BLAST of EWM27088.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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