EWM30310.1, cds358 (CDS) Nannochloropsis gaditana

Overview
NameEWM30310.1
Unique Namecds358
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:873735..873978 +
Alignment locationCM002455.1:874040..874203 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30310.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g138.1827.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:873735..873978 +
CM002455.1supercontigCM002455.1:874040..874203 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30310.1 vs. NCBI_GenBank
Match: gi|585112969|gb|EWM30310.1| (hypothetical protein Naga_100003g138 [Nannochloropsis gaditana])

HSP 1 Score: 274.633 bits (701), Expect = 2.180e-93
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 0 
Query:    1 MDPACFNLPRPSRLEPGPSQPPPPAPAISLPPLPLAALCCTNTCCNYESILIVCDILILVEQADKSGRILRESRRRRWISTLMLHITVFHPCSMCAVRSRFDIGIHETQNIFRQRDMCDACPVYTRFIAPTKLLM 135
            MDPACFNLPRPSRLEPGPSQPPPPAPAISLPPLPLAALCCTNTCCNYESILIVCDILILVEQADKSGRILRESRRRRWISTLMLHITVFHPCSMCAVRSRFDIGIHETQNIFRQRDMCDACPVYTRFIAPTKLLM
Sbjct:    1 MDPACFNLPRPSRLEPGPSQPPPPAPAISLPPLPLAALCCTNTCCNYESILIVCDILILVEQADKSGRILRESRRRRWISTLMLHITVFHPCSMCAVRSRFDIGIHETQNIFRQRDMCDACPVYTRFIAPTKLLM 135
The following BLAST results are available for this feature:
BLAST of EWM30310.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112969|gb|EWM30310.1|2.180e-93100.00hypothetical protein Naga_100003g138 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna358rna358Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications