EWM27114.1, cds3579 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|585109291|gb|EWM27114.1| (Eukaryotic rRNA processing [Nannochloropsis gaditana]) HSP 1 Score: 696.812 bits (1797), Expect = 0.000e+0 Identity = 346/346 (100.00%), Postives = 346/346 (100.00%), Query Frame = 0 Query: 1 MGKKRTSKARTGALDPDELLALEEEDEFAKELAAAEEMEREQALSRTIDSTGNGDFLDEDGDKDEDEDEEALQPRPRVFINNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDGFDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSKR 346 MGKKRTSKARTGALDPDELLALEEEDEFAKELAAAEEMEREQALSRTIDSTGNGDFLDEDGDKDEDEDEEALQPRPRVFINNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDGFDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSKR Sbjct: 1 MGKKRTSKARTGALDPDELLALEEEDEFAKELAAAEEMEREQALSRTIDSTGNGDFLDEDGDKDEDEDEEALQPRPRVFINNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDGFDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSKR 346
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|299472338|emb|CBN77526.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 219.55 bits (558), Expect = 1.417e-65 Identity = 125/265 (47.17%), Postives = 167/265 (63.02%), Query Frame = 0 Query: 82 NQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDGFDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSKR 346 N+ GLLQ ++E + PW ET+ V PL L DVHDDL RE +FY AL +K R+ LV VPYKRPEDF C+M+K+D HM ++KD+L+FEQ+KM A E+R+ +QE RK++K L S+K EK++ KK+ LE + QWKK A+R G G L DDDG D +L+G AG GG N +R +K+KKYGFGG KR+ Q+D +SLND S +NPK+G + SR KG NRPGK+ R K +++R Sbjct: 87 NKAGLLQKAAEMER---AIPWEETLTVSDIPLELEDVHDDLKREVSFYNNALEAVKRGRSLLVAANVPYKRPEDFLCEMVKTDAHMDKIKDKLIFEQQKMDAFEQRKARQEQRKYAKELNSNKVAEKSKRKKEGLEEIEQWKKG-AKRSRG-GPLADDDGLDAVLSG---------NKAGGRGGGPGGRNVKREAKNKKYGFGGKKREKGQSDPRSLNDLSQYNPKQGGSGRSRSKPA---------KGSNRPGKSVRTKNKNRR 328
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|1173955865|gb|OQS02771.1| (rRNA-processing protein EBP2 [Thraustotheca clavata]) HSP 1 Score: 204.142 bits (518), Expect = 1.442e-59 Identity = 115/247 (46.56%), Postives = 155/247 (62.75%), Query Frame = 0 Query: 102 WPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRG-GKKGGGGAKKGGNRPGKTTRQKMRSKR 346 W ET+D C++PL L++ HDDL RE AFY L+ +K+A+ RL++ +VPYKRP D+F +MLKSD HMARVKD+L++EQKK+ AVEER+K Q ++K +K L+S K K++ ++K TLEAV QWKK + G ++EDDDG FD++L G G+ G N +R + DKK+G GG R K+ KS ND S+F+ SR G GK+G KGG RPGK R K KR Sbjct: 108 WVETLDTCKYPLELSNAHDDLKREVAFYNQTLSSVKDAKQRLLKEKVPYKRPGDYFAEMLKSDAHMARVKDKLIYEQKKIAAVEERKKSQAHKKVAKELQSQKQKQRLQEKNDTLEAVKQWKKRKNTNNSGGKVVEDDDGSFDKMLEG---AGKRKRDNDDHGANKRPKVNKKREAHDKKWGSGGKTRMDKKNSKKSTNDMSSFSR-------SRNNEGVGKRGA----KGGKRPGKMARSKATQKR 340
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|669137824|ref|XP_008604480.1| (hypothetical protein SDRG_00766 [Saprolegnia diclina VS20] >gi|530743669|gb|EQC41911.1| hypothetical protein SDRG_00766 [Saprolegnia diclina VS20]) HSP 1 Score: 204.142 bits (518), Expect = 1.702e-59 Identity = 117/269 (43.49%), Postives = 169/269 (62.83%), Query Frame = 0 Query: 80 INNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRG-GKKGGGGAKKGGNRPGKTTRQKMRSKR 346 I N+ +L++ ++ + W ET+D C+ PL L++ HDDL RE AFY LA +K+A+ARL++ ++PYKRP+D+F +MLKSD HMARVKD+L++EQKK+ AVEER+K Q ++K +K L++ K K++ ++K TL+AV QWKK + G ++EDDDG FD++L G + R G GR + + R ++ +KK+G GG R K+ KS ND S+F+ SR G GK+ A KGG RPGK R K KR Sbjct: 83 IYNKDAMLRLANDLDLKQKF-AWTETLDTCKVPLELSNAHDDLKREVAFYNQTLASVKDAKARLLKEKLPYKRPDDYFAEMLKSDAHMARVKDKLIYEQKKIAAVEERKKSQAHKKVAKELQTQKTKQRLQEKNDTLDAVKQWKKRKNTNNSGGTVVEDDDGSFDKMLDG-AANKRKRDGDDGRDAKRPKVNKKREVA-NKKWGSGGKTRADKKNSKKSTNDMSSFSR-------SRNNEGVGKR--NAAPKGGKRPGKMARSKTNQKR 339
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|695459713|ref|XP_009537810.1| (hypothetical protein PHYSODRAFT_353037 [Phytophthora sojae] >gi|348667220|gb|EGZ07046.1| hypothetical protein PHYSODRAFT_353037 [Phytophthora sojae]) HSP 1 Score: 202.986 bits (515), Expect = 4.221e-59 Identity = 133/330 (40.30%), Postives = 178/330 (53.94%), Query Frame = 0 Query: 32 LAAAEEMEREQALSRTIDSTGNGDFLDEDGDKDEDEDEEALQPRPRVF---------------INNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSK 345 L AE+ E+ L+ S+ + D + D +ED D EA R V + N++ LL ++ ++ PW ET+D C PL L VHDDL RE AFY LAG++ A+ RL + V YKRP D+F +MLKSD HMA+VKD+L++EQKK+TAVEER+K Q +RK +K +++ K KE+ + KK TLEAV QWKK + GG L +DDDG D I+ G G R AG G N R +K+ K+GFGG +R K +S ND S+ +P G R K KGG R GK R R+K Sbjct: 17 LVRAEDAAEEEILATPALSSAAANASDVESDNEEDADAEAEIERRLVAEAQAEADAAKRESKGVYNKEALLALVADWDA--NPLPWVETLDTCAVPLELESVHDDLKREVAFYNNTLAGVRLAKDRLKKEGVAYKRPNDYFAEMLKSDAHMAKVKDKLIYEQKKITAVEERKKSQAHRKVAKEIQAEKVKERNQQKKDTLEAVKQWKKRKGSDKGG-ALKDDDDGELDTIIGG---GKRKHAGGDRDGANKKPRANKAREAKNAKFGFGGKRRHAKSNTKESTNDMSS-HP---------GARKAKAKSQALAKGGKRAGKAQRANQRNK 330
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|1173950169|gb|OQR98146.1| (kinesin-like protein [Achlya hypogyna]) HSP 1 Score: 213.001 bits (541), Expect = 1.568e-58 Identity = 121/268 (45.15%), Postives = 167/268 (62.31%), Query Frame = 0 Query: 80 INNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSKR 346 I N+ LL++ G+++ + W ET+D C+FPL L + HDDL RE AFY LA +K+A+ARL++ +VPYKRPED+F +MLKSD HMARVKD+L++EQKK+ AVEER+K Q ++K +K L+S KAK++ ++K TL+AV QWKK + G ++EDDDG FD++L G + R G RG+ N +R + +K++G GG R K+ KS ND S+F SR G A KG RPGK R K KR Sbjct: 648 IYNKDALLRLAGELDLKQKF-AWVETLDTCKFPLELTNAHDDLKREVAFYNQTLASVKDAKARLLKEKVPYKRPEDYFAEMLKSDAHMARVKDKLIYEQKKIAAVEERKKSQAHKKVAKELQSQKAKQRLQEKNDTLDAVKQWKKRKNTNNSGGTVVEDDDGSFDKMLDGANKRKREG---DDRGDNKRPKVNKKREAANKRWGSGGKTRADKKNSKKSTNDMSSF---------SRARNNDGVGKRAAPKGAKRPGKMARGKNNQKR 902
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|813126108|ref|XP_012196922.1| (hypothetical protein SPRG_02948 [Saprolegnia parasitica CBS 223.65] >gi|641538640|gb|KDO32471.1| hypothetical protein SPRG_02948 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 201.445 bits (511), Expect = 1.673e-58 Identity = 115/269 (42.75%), Postives = 169/269 (62.83%), Query Frame = 0 Query: 80 INNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRG-GKKGGGGAKKGGNRPGKTTRQKMRSKR 346 I N+ +L++ +++ + W ET+D C+ PL L++ HDDL RE AFY L +K+A+ARL++ ++PYKRP+D+F +MLKSD HMARVKD+L++EQKK+ AVEER+K Q ++K +K L++ K K++ ++K TL+AV QWKK + G ++EDDDG FD++L G + R G GR + + R ++ +KK+G GG R K+ KS ND S+F+ +R G GK+ A KGG RPGK R K KR Sbjct: 85 IYNKDAMLRLANELDLKQKF-AWTETLDTCKVPLELSNAHDDLKREVAFYNQTLGSVKDAKARLLKEKLPYKRPDDYFAEMLKSDAHMARVKDKLIYEQKKIAAVEERKKSQAHKKVAKELQTQKTKQRLQEKNDTLDAVKQWKKRKNTNNSGGTVVEDDDGSFDKMLDG-AANKRKRDGDDGRDAKRPKVNKKREVA-NKKWGSGGKTRADKKNSKKSTNDMSSFSR-------ARNNEGVGKR--NAAPKGGKRPGKMARSKTNQKR 341
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|675190171|ref|XP_008903970.1| (hypothetical protein PPTG_09937 [Phytophthora parasitica INRA-310] >gi|567963005|gb|ETK88513.1| hypothetical protein L915_07248 [Phytophthora parasitica] >gi|568096118|gb|ETN10873.1| hypothetical protein PPTG_09937 [Phytophthora parasitica INRA-310] >gi|570953115|gb|ETP18372.1| hypothetical protein F441_07400 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 194.897 bits (494), Expect = 4.326e-56 Identity = 116/267 (43.45%), Postives = 158/267 (59.18%), Query Frame = 0 Query: 80 INNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSK 345 + N++ LL ++ +++ PW ET+D C PL L VHDDL RE AFY LA ++ A+ RL + V YKRP+D+F +MLKSD HMA+VKD+L++EQKK+TAVEER+K Q +RK +K +++ K KE+ + KK TLEAV QWKK + G GL +DDD D I++G+ R AG G N R +++ K+GFGG +R K +S ND S+F P G R K A KGG R GK R R+K Sbjct: 82 VYNREALLALVKDWDAK--PLPWVETLDTCAVPLELESVHDDLKREVAFYNNTLAAVRLAKDRLKKEGVAYKRPDDYFAEMLKSDAHMAKVKDKLIYEQKKITAVEERKKSQAHRKVAKEIQAEKIKERNQQKKDTLEAVKQWKKRKGNDKRG-GLKDDDDTELDSIVSGK----RKHAGGDRDGANKKPRVNKAREARNAKFGFGGKRRHAKSNTKESTNDMSSF-P---------GARKAKMKSQAAAKGGKRAGKAQRANQRNK 331
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|567991710|gb|ETL41911.1| (hypothetical protein L916_07196 [Phytophthora parasitica] >gi|568020955|gb|ETL95066.1| hypothetical protein L917_07081 [Phytophthora parasitica] >gi|568051392|gb|ETM48298.1| hypothetical protein L914_07149 [Phytophthora parasitica] >gi|570987633|gb|ETP46292.1| hypothetical protein F442_07446 [Phytophthora parasitica P10297] >gi|970653831|gb|KUF92241.1| hypothetical protein AM588_10008397 [Phytophthora nicotianae]) HSP 1 Score: 194.897 bits (494), Expect = 5.302e-56 Identity = 116/267 (43.45%), Postives = 158/267 (59.18%), Query Frame = 0 Query: 80 INNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSK 345 + N++ LL ++ +++ PW ET+D C PL L VHDDL RE AFY LA ++ A+ RL + V YKRP+D+F +MLKSD HMA+VKD+L++EQKK+TAVEER+K Q +RK +K +++ K KE+ + KK TLEAV QWKK + G GL +DDD D I++G+ R AG G N R +++ K+GFGG +R K +S ND S+F P G R K A KGG R GK R R+K Sbjct: 82 VYNREALLALVKDWDAK--PLPWVETLDTCAVPLELESVHDDLKREVAFYNNTLAAVRLAKDRLKKEGVAYKRPDDYFAEMLKSDAHMAKVKDKLIYEQKKITAVEERKKSQAHRKVAKEIQAEKIKERNQQKKDTLEAVKQWKKRKGNDKRG-GLKDDDDTELDSIVSGK----RKHAGGDRDGANKKPRVNKAREARNAKFGFGGKRRHAKSNTKESTNDMSSF-P---------GARKAKMKSQAAAKGGKRAGKAQRANQRNK 331
BLAST of EWM27114.1 vs. NCBI_GenBank
Match: gi|570329397|gb|ETO77345.1| (hypothetical protein F444_07449 [Phytophthora parasitica P1976]) HSP 1 Score: 194.897 bits (494), Expect = 5.475e-56 Identity = 116/267 (43.45%), Postives = 158/267 (59.18%), Query Frame = 0 Query: 80 INNQKGLLQMLGQIESENGSRPWPETMDVCQFPLLLNDVHDDLVRETAFYRVALAGIKEARARLVQYQVPYKRPEDFFCDMLKSDDHMARVKDRLLFEQKKMTAVEERRKQQENRKFSKALKSHKAKEKTEDKKKTLEAVNQWKKDRAQRGGGQGLLEDDDG-FDRILAGRSPGGRFGAGAAGRGEGGGRHDNSRRLSKDKKYGFGGPKRKLKQADTKSLNDFSTFNPKKGKTFGSRGGRGGKKGGGGAKKGGNRPGKTTRQKMRSK 345 + N++ LL ++ +++ PW ET+D C PL L VHDDL RE AFY LA ++ A+ RL + V YKRP+D+F +MLKSD HMA+VKD+L++EQKK+TAVEER+K Q +RK +K +++ K KE+ + KK TLEAV QWKK + G GL +DDD D I++G+ R AG G N R +++ K+GFGG +R K +S ND S+F P G R K A KGG R GK R R+K Sbjct: 82 VYNREALLALVKDWDAK--PLPWVETLDTCAVPLELESVHDDLKREVAFYNNTLAAVRLAKDRLKKEGVAYKRPDDYFAEMLKSDAHMAKVKDKLIYEQKKITAVEERKKSQAHRKVAKEIQAEKIKERNQQKKDTLEAVKQWKKRKGNDKRG-GLKDDDDTELDSIVSGK----RKHAGGDRDGANKKPRVNKAREARNAKFGFGGKRRHAKSNTKESTNDMSSF-P---------GARKAKMKSQAAAKGGKRAGKAQRANQRNK 331 The following BLAST results are available for this feature:
BLAST of EWM27114.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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