EWM30263.1, cds357 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|585112922|gb|EWM30263.1| (Protein of unknown function DUF4281 [Nannochloropsis gaditana]) HSP 1 Score: 1072.77 bits (2773), Expect = 0.000e+0 Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 0
Query: 1 MVLIMKDWQILLSIFVMAVMAGPATGFIFRSQPILFLQTSLPRSSHFPSRSQVLRASLLHELGQQLPFIVVAGDGTSVDLNALQDSLPSVSIDDAKALLDSFSDPDTRSNIVKSLPKLNLPAKVPLQLQDALKAAQEATPGALDSIKGFTREFQGTLEKIRQGGSLNLPSLSSIPSVDVESVPLGAEIKTELSALKSQVGEIVGSRLSGLGSAFTEKAGDVLIPYQPFLEQTKRQLGDKFSVVSQFAEQATQELSKDAETLSPALRALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFASISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIMTTGSRAVAPSAADDMAKSMVKDAEKQSKSTLRAADRQAEKSLNKANSEARKIIIQARKQAEEALSSENKIIASAEAQAQRILAEAQSKADAIMRKTSPDSSQTASSAESSSTSRTSME 537
MVLIMKDWQILLSIFVMAVMAGPATGFIFRSQPILFLQTSLPRSSHFPSRSQVLRASLLHELGQQLPFIVVAGDGTSVDLNALQDSLPSVSIDDAKALLDSFSDPDTRSNIVKSLPKLNLPAKVPLQLQDALKAAQEATPGALDSIKGFTREFQGTLEKIRQGGSLNLPSLSSIPSVDVESVPLGAEIKTELSALKSQVGEIVGSRLSGLGSAFTEKAGDVLIPYQPFLEQTKRQLGDKFSVVSQFAEQATQELSKDAETLSPALRALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFASISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIMTTGSRAVAPSAADDMAKSMVKDAEKQSKSTLRAADRQAEKSLNKANSEARKIIIQARKQAEEALSSENKIIASAEAQAQRILAEAQSKADAIMRKTSPDSSQTASSAESSSTSRTSME
Sbjct: 1 MVLIMKDWQILLSIFVMAVMAGPATGFIFRSQPILFLQTSLPRSSHFPSRSQVLRASLLHELGQQLPFIVVAGDGTSVDLNALQDSLPSVSIDDAKALLDSFSDPDTRSNIVKSLPKLNLPAKVPLQLQDALKAAQEATPGALDSIKGFTREFQGTLEKIRQGGSLNLPSLSSIPSVDVESVPLGAEIKTELSALKSQVGEIVGSRLSGLGSAFTEKAGDVLIPYQPFLEQTKRQLGDKFSVVSQFAEQATQELSKDAETLSPALRALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFASISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIMTTGSRAVAPSAADDMAKSMVKDAEKQSKSTLRAADRQAEKSLNKANSEARKIIIQARKQAEEALSSENKIIASAEAQAQRILAEAQSKADAIMRKTSPDSSQTASSAESSSTSRTSME 537
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|298705735|emb|CBJ49043.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 202.216 bits (513), Expect = 1.821e-55 Identity = 128/366 (34.97%), Postives = 190/366 (51.91%), Query Frame = 0
Query: 184 LGAEIKTELS----ALKSQVGEIVGSRLSGLGSAFTEKAGDVLIPYQPFLEQTKRQLGDKFSVVSQFAEQATQELSKDAETLS----PALRALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFAS-ISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIMTTGSRAVAPSAADDMAKSMVKDAEKQSKSTLRAADRQAEKSLNKANSEARKIIIQARKQA--------EEALSSENKIIASAEAQAQRILAEAQSKADAIMRKTSPDSSQTASSAESSSTS 532
LG +I LS +LK VG + G + E G+ P Q + Q V S+F + +EL K+ +TL+ A++ ++ V P LF AEN ILP W +++ P K +++SY P+++AAL Y W Y FQ+P +L+GFAS I++L L+KG G E ATAW+HF+A+DLF+GRW++LDG RN ++T HSL L +LFGP G LSHLLTR + + + DIM +P S STLR R+A++ + KA EA +I+ QAR EEA + I+ AE + + +L A + +T P S+ + +E+ + S
Sbjct: 105 LGEDISNSLSGQLDSLKIGAQGAVGEAQTQFGQSVAENIGN---PVQEGMGQ----------VFSKFG-TSPEELLKEEQTLTNGVQQAIKGVERVAPPSTLFYAENAAILPLWVGMVVWPEEPLTKKIMNSYGPLVLAALIYMWLTYECFQNPVSLQGFASGITNLGGLTKGFGEEVSVATAWSHFLAEDLFIGRWVYLDGQRNKIFTKHSLVLCYLFGPAGFLSHLLTRGVTSVVKPGVRDIMQQQPTEPSPKTPSSGTPS----------STLR---REAKELITKAKREAEEILQQARSTGAAQAASLLEEAETEALLILKGAEVEKEALLLRANKTEPSTEAETRPAGSEAKAGSEAKAES 443
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|255086233|ref|XP_002509083.1| (predicted protein, partial [Micromonas commoda] >gi|226524361|gb|ACO70341.1| predicted protein, partial [Micromonas commoda]) HSP 1 Score: 135.191 bits (339), Expect = 3.628e-34 Identity = 62/132 (46.97%), Postives = 81/132 (61.36%), Query Frame = 0
Query: 273 TPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFAS-ISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLL 403
TP +F+ EN I PFW +I P N +T++ SY ++ Y + Y +F DP +E F++ DL+ALSKG E A WAHFIA DLFVGRWI+LD +N V+ AHSL L FGPTG++SH L
Sbjct: 1 TPETVFDVENAAIFPFWLGMIAFPKNKVTETVMGSYAVPILLGFVYIYLTYYSFSDPRIIEAFSTGKPDLAALSKGFSYEWCMAVGWAHFIAMDLFVGRWIYLDARKNDVFAAHSLLLCLFFGPTGVISHTL 132
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|303284787|ref|XP_003061684.1| (predicted protein, partial [Micromonas pusilla CCMP1545] >gi|226457014|gb|EEH54314.1| predicted protein, partial [Micromonas pusilla CCMP1545]) HSP 1 Score: 128.257 bits (321), Expect = 1.590e-31 Identity = 58/131 (44.27%), Postives = 79/131 (60.31%), Query Frame = 0
Query: 277 LFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFAS-ISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRS 406
+FN EN+ I P W +I AP + + ++ S L V Y + + +F DP L+ F++ DL+AL+KG E A WAHFIA DLF GRWI+LD +N V+ AHSL L FGPTG +SH+ TR+
Sbjct: 3 VFNVENVAIFPLWLGMIFAPKSGVTRAVMDSALVPCVCGFVYVYLTWYSFHDPRILDAFSTGKPDLAALAKGFSYEWCVAVGWAHFIAMDLFAGRWIYLDARKNDVFAAHSLLLCLFFGPTGAISHVTTRA 133
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|873220612|emb|CEM35383.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 124.405 bits (311), Expect = 1.066e-28 Identity = 65/160 (40.62%), Postives = 91/160 (56.88%), Query Frame = 0
Query: 254 LSKDAETLSPALRALKTVGTPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFA-SISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFR 412
LS A+ + + AL + P +F A N +LPFWA +++AP + L+ S P +V L Y W A ++ P A+EG L L+K E AT W HF+A+DLFVGRW++LDG +N V HS L+ LFGP G++SHL+TR V+ R
Sbjct: 77 LSSAADVGNSFVDALPALLQPSAVFTASNAFVLPFWALMVIAPGAQVTEKLMRSVTPFIVLGLLYLWLAVISSTFPEAVEGLGQGAGQLPVLTKAFSLEPVVATGWVHFLAEDLFVGRWVYLDGRKNDVPIRHSCLLSLLFGPLGVVSHLVTRDIVRRLR 236
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|504992244|ref|WP_015179346.1| (DUF4281 domain-containing protein [Oscillatoria nigro-viridis] >gi|428244359|gb|AFZ10145.1| hypothetical protein Osc7112_5950 [Oscillatoria nigro-viridis PCC 7112]) HSP 1 Score: 119.783 bits (299), Expect = 3.430e-28 Identity = 61/134 (45.52%), Postives = 86/134 (64.18%), Query Frame = 0
Query: 273 TPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLP--VLVAALAYTWSAYLAFQDPAALEGFASISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLT 404
TP +FNA N+ ++PFWA +IL P+ + +++S++P VL A Y + + L ++ AAL S L+ ++K LG E AT W HF+ DLFVGRWI+L+G R GVWT HSL L F GP G+LSH++T
Sbjct: 2 TPELIFNAGNLFVVPFWAIMILLPNWGITRKVMNSFIPFAVLAALYIYLFGSSLTAENAAAL----SNPKLADIAKFLGEETAAATGWIHFLVMDLFVGRWIYLEGQRTGVWTVHSLALCFFAGPMGLLSHIVT 131
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|493685703|ref|WP_006635816.1| (DUF4281 domain-containing protein [Microcoleus vaginatus] >gi|333455057|gb|EGK83721.1| hypothetical protein MicvaDRAFT_3428 [Microcoleus vaginatus FGP-2]) HSP 1 Score: 118.242 bits (295), Expect = 1.117e-27 Identity = 60/134 (44.78%), Postives = 85/134 (63.43%), Query Frame = 0
Query: 273 TPRNLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFASISD--LSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLT 404
TP +FN N+ ++PFWA +IL P+ + +++S++P V A+ Y YL F E A++S+ L+ ++K LG E AT W HF+ DLFVGRWI+L+G R GVWT HSL L F GP G+LSH++T
Sbjct: 2 TPELIFNVGNLFVVPFWAIMILLPNWGITRKVMNSFIPFAVLAVLYI---YL-FGSSLTAENAAALSNPKLADIAKFLGEETAAATGWIHFLVMDLFVGRWIYLEGQRTGVWTVHSLALCFFAGPMGLLSHIVT 131
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|493216225|ref|WP_006199139.1| (DUF4281 domain-containing protein [Nodularia spumigena] >gi|119461712|gb|EAW42741.1| hypothetical protein N9414_17660 [Nodularia spumigena CCY9414] >gi|585120865|gb|AHJ27807.1| hypothetical protein NSP_14730 [Nodularia spumigena CCY9414] >gi|1020326855|gb|KZL51357.1| hypothetical protein A2T98_02630 [Nodularia spumigena CENA596]) HSP 1 Score: 115.546 bits (288), Expect = 1.099e-26 Identity = 57/137 (41.61%), Postives = 81/137 (59.12%), Query Frame = 0
Query: 277 LFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFASISD--LSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIF 411
LF+ NI +LPFW +I P F + ++ SYLP +V A AY + F + E A++S+ L+ +++ G E AT W HF+ DLFVGRWI+L+G + G+WT HS+ L GP G+LSH+LT K F
Sbjct: 6 LFDIANIFVLPFWVLMIFLPKWKFTRRVMESYLPFVVLAGAYLY----LFVNSITPENAAALSNPQLADIARFFGDETAAATGWIHFLVMDLFVGRWIYLEGQKTGIWTIHSIALCLFAGPLGLLSHILTYWISKAF 138
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|505028733|ref|WP_015215835.1| (hypothetical protein [Anabaena cylindrica] >gi|428680448|gb|AFZ59214.1| hypothetical protein Anacy_3836 [Anabaena cylindrica PCC 7122] >gi|1210084615|dbj|BAY03757.1| hypothetical protein NIES19_30120 [Anabaena cylindrica PCC 7122]) HSP 1 Score: 115.546 bits (288), Expect = 1.270e-26 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 0
Query: 276 NLFNAENIVILPFWASVILAPSNTFVKTLVSSYLPVLVAALAYTWSAYLAFQDPAALEGFASISD--LSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIMTTGSRAV 426
+LFN N+ +LPFWA +IL P+ + ++ SYLP +V A AY + F E A++S+ L+ ++K G E AT W HF+ DLFVGRWI+ +G + +WT HSL L GP G+LSH+ T K F D+ AV
Sbjct: 5 DLFNVANLFVLPFWALMILLPNWNITRKVMESYLPFVVLAGAYLY----LFVTSITPENAAALSNPQLADIAKFFGDETAAATGWIHFLVMDLFVGRWIYWEGQKTNIWTIHSLALCLFAGPLGVLSHIFTYWITKAFSKGSEDVKVAEKAAV 153
BLAST of EWM30263.1 vs. NCBI_GenBank
Match: gi|753911116|ref|WP_041640312.1| (DUF4281 domain-containing protein [Trichormus azollae]) HSP 1 Score: 115.161 bits (287), Expect = 1.697e-26 Identity = 61/152 (40.13%), Postives = 83/152 (54.61%), Query Frame = 0
Query: 277 LFNAENIVILPFWASVILAPSNTFVKTLVSSYLP--VLVAALAYTWSAYLAFQDPAALEGFASISDLSALSKGLGTEAGTATAWAHFIAQDLFVGRWIFLDGIRNGVWTAHSLTLAFLFGPTGILSHLLTRSFVKIFRWDIADIMTTGSRAV 426
LFN+ N+ +LPFWA +IL P+ + ++ SY P VL AA Y + + ++ AAL S L+ ++K E AT W HF+ DLFVGRWI+ +G + G+WT HSL L GP GILSH+ T K F + G AV
Sbjct: 6 LFNSANLFVLPFWALMILLPNWKVTRKVMESYQPFVVLGAAYVYLFVTSITPENAAAL----SNPQLADIAKFFSNETAAATGWIHFLVMDLFVGRWIYWEGQKTGIWTIHSLALCLFSGPIGILSHIFTSCIFKAFSKGCEGLTPEGKAAV 153 The following BLAST results are available for this feature:
BLAST of EWM30263.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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