EWM27123.1, cds3561 (CDS) Nannochloropsis gaditana

Overview
NameEWM27123.1
Unique Namecds3561
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:726412..726684 -
Alignment locationCM002461.1:725451..726281 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM27123.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100046g16.5162.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:726412..726684 -
CM002461.1supercontigCM002461.1:725451..726281 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM27123.1 vs. NCBI_GenBank
Match: gi|585109300|gb|EWM27123.1| (hypothetical protein Naga_100046g16 [Nannochloropsis gaditana])

HSP 1 Score: 748.814 bits (1932), Expect = 0.000e+0
Identity = 367/367 (100.00%), Postives = 367/367 (100.00%), Query Frame = 0 
Query:    1 MSLTSDEAWENHFDSLSPARKRYHYTVLSALLFDPEVELCELEMIKADAMKAVARQARRDRLLLNDALKKEHEQELTEEIAVIEKRVEEMQVWVQNEIASLKPVALQKVVSEYEHAMEHFYLHGDTNTKGRKHSFLLFDNEAEEFEEIGSEKMDTYDSEENELDGRDSALAGVDVSERETDMTDYTLSSLNPLSTKRLASPMTTSESNGDFLPPLRKKNTRSSTLGNLKQRVVEDLVDVMVGAPDRGGRRSRLGLEPEGLVQEVIGSLNQAMLQKQLSTALAAAKQECEQERHRALNDEMEKRLKTALEQMQCEMSAEFENHLQEEKEKVRVLTEVAMDEQRRELEERLKEEHAREMAEVLQKVGLA 367
            MSLTSDEAWENHFDSLSPARKRYHYTVLSALLFDPEVELCELEMIKADAMKAVARQARRDRLLLNDALKKEHEQELTEEIAVIEKRVEEMQVWVQNEIASLKPVALQKVVSEYEHAMEHFYLHGDTNTKGRKHSFLLFDNEAEEFEEIGSEKMDTYDSEENELDGRDSALAGVDVSERETDMTDYTLSSLNPLSTKRLASPMTTSESNGDFLPPLRKKNTRSSTLGNLKQRVVEDLVDVMVGAPDRGGRRSRLGLEPEGLVQEVIGSLNQAMLQKQLSTALAAAKQECEQERHRALNDEMEKRLKTALEQMQCEMSAEFENHLQEEKEKVRVLTEVAMDEQRRELEERLKEEHAREMAEVLQKVGLA
Sbjct:    1 MSLTSDEAWENHFDSLSPARKRYHYTVLSALLFDPEVELCELEMIKADAMKAVARQARRDRLLLNDALKKEHEQELTEEIAVIEKRVEEMQVWVQNEIASLKPVALQKVVSEYEHAMEHFYLHGDTNTKGRKHSFLLFDNEAEEFEEIGSEKMDTYDSEENELDGRDSALAGVDVSERETDMTDYTLSSLNPLSTKRLASPMTTSESNGDFLPPLRKKNTRSSTLGNLKQRVVEDLVDVMVGAPDRGGRRSRLGLEPEGLVQEVIGSLNQAMLQKQLSTALAAAKQECEQERHRALNDEMEKRLKTALEQMQCEMSAEFENHLQEEKEKVRVLTEVAMDEQRRELEERLKEEHAREMAEVLQKVGLA 367
The following BLAST results are available for this feature:
BLAST of EWM27123.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585109300|gb|EWM27123.1|0.000e+0100.00hypothetical protein Naga_100046g16 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3570rna3570Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications