EWM30355.1, cds356 (CDS) Nannochloropsis gaditana

Overview
NameEWM30355.1
Unique Namecds356
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:871795..871958 -
Alignment locationCM002455.1:871479..871581 -
Alignment locationCM002455.1:870324..870402 -
Alignment locationCM002455.1:870100..870179 -
Alignment locationCM002455.1:869968..870045 -

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Properties
Property NameValue
Protein idEWM30355.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100003g140.1872.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:871795..871958 -
CM002455.1supercontigCM002455.1:871479..871581 -
CM002455.1supercontigCM002455.1:870324..870402 -
CM002455.1supercontigCM002455.1:870100..870179 -
CM002455.1supercontigCM002455.1:869968..870045 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM30355.1 vs. NCBI_GenBank
Match: gi|585113014|gb|EWM30355.1| (hypothetical protein Naga_100003g140 [Nannochloropsis gaditana])

HSP 1 Score: 342.428 bits (877), Expect = 3.235e-119
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0 
Query:    1 MQRGFNEIQCRHRAASHDKNTALRILTPQIKCNCPFTAYVPLNIMSSFLRSACNLGHRTTSLKSCSTPVIAQHRLRDRESTGEVRISFSAIFSEPGPRTPRAQRHDAPRTAGSCTMIRQKTSDLKGLGFGLLPHALRHQTCFLPASETSGRITPISHSPDLLHSKEC 167
            MQRGFNEIQCRHRAASHDKNTALRILTPQIKCNCPFTAYVPLNIMSSFLRSACNLGHRTTSLKSCSTPVIAQHRLRDRESTGEVRISFSAIFSEPGPRTPRAQRHDAPRTAGSCTMIRQKTSDLKGLGFGLLPHALRHQTCFLPASETSGRITPISHSPDLLHSKEC
Sbjct:    1 MQRGFNEIQCRHRAASHDKNTALRILTPQIKCNCPFTAYVPLNIMSSFLRSACNLGHRTTSLKSCSTPVIAQHRLRDRESTGEVRISFSAIFSEPGPRTPRAQRHDAPRTAGSCTMIRQKTSDLKGLGFGLLPHALRHQTCFLPASETSGRITPISHSPDLLHSKEC 167
The following BLAST results are available for this feature:
BLAST of EWM30355.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585113014|gb|EWM30355.1|3.235e-119100.00hypothetical protein Naga_100003g140 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna356rna356Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications