EWM27226.1, cds3541 (CDS) Nannochloropsis gaditana

Overview
NameEWM27226.1
Unique Namecds3541
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002461.1:676413..677784 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM27226.1
Productdihydrouridine synthase
Partialtrue
Orig transcript idgnl|cribi|Naga_100010g112.6196.mrna
GbkeyCDS
End range.
End range677784
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002461.1supercontigCM002461.1:676413..677784 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0055114oxidation-reduction process
GO:0008033tRNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
GO:0017150tRNA dihydrouridine synthase activity
GO:0050660flavin adenine dinucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR018517tRNA_hU_synthase_CS
IPR013785Aldolase_TIM
IPR001269tRNA_hU_synthase
Homology
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|585109406|gb|EWM27226.1| (dihydrouridine synthase, partial [Nannochloropsis gaditana])

HSP 1 Score: 924.08 bits (2387), Expect = 0.000e+0
Identity = 457/457 (100.00%), Postives = 457/457 (100.00%), Query Frame = 0
Query:    1 MVAFRARSKWRRGWRRLQSDAGSADGLSSSEAFQVYRDLIITRLCSPEWPLPSPPRRFSFLREGFDETQPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQMVLLRQFSEFLRLSAVECGVALPEGERLVPVLSLGEIKSLHRREINGQEDEEDDSWGMLFLEGNEME 457
            MVAFRARSKWRRGWRRLQSDAGSADGLSSSEAFQVYRDLIITRLCSPEWPLPSPPRRFSFLREGFDETQPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQMVLLRQFSEFLRLSAVECGVALPEGERLVPVLSLGEIKSLHRREINGQEDEEDDSWGMLFLEGNEME
Sbjct:    1 MVAFRARSKWRRGWRRLQSDAGSADGLSSSEAFQVYRDLIITRLCSPEWPLPSPPRRFSFLREGFDETQPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQMVLLRQFSEFLRLSAVECGVALPEGERLVPVLSLGEIKSLHRREINGQEDEEDDSWGMLFLEGNEME 457          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|857977093|emb|CEO96840.1| (hypothetical protein PBRA_005444 [Plasmodiophora brassicae])

HSP 1 Score: 211.075 bits (536), Expect = 1.834e-60
Identity = 126/343 (36.73%), Postives = 174/343 (50.73%), Query Frame = 0
Query:   69 QPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQAL------------LQGLLQQERVALWNLLGSSQMVLLRQFSE 399
             P F+ APMV QSE AFRLLV+  G  L ++PM+LA++V+ +  +   D            D P+IAQ+AG+DP  M  AA+ L     +  VD+N GCPQQCA+ G+YGA+L +  P+T   +VR I   + VPV+CK+R +  V     LA+RL  AG SML VHGR   +R H    + + I A++ A+ +PVVANG  R+R+ A + ME TGCD  MSA  LLR P +F                                   DP   F C W Y RLA  HPP      RDH+  +            L G+L  + +   N +G+   ++  +F E
Sbjct:   19 SPRFICAPMVRQSELAFRLLVRSLGCDLAYTPMILAKDVVERYAQTGYDRVATRAAFFATGDRPLIAQIAGNDPKVMAEAARLL--APDVDAVDVNFGCPQQCARLGHYGAFLLD-HPDTMVDIVRAIRSAISVPVTCKIRLLNPVSLAIDLAKRLEDAGCSMLAVHGRLRDQRHHCGPVNYEGIAAIKAALRIPVVANGGIRSRDHALQVMEATGCDAVMSATTLLRQPAMFAG---------------------------------DPVSVFDCLWRYARLARTHPPIADVSARDHVLTVFRERFHAEGHLDLVGILSNKAIRTANQIGAVLAIIAHRFQE 325          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|698795718|ref|XP_009830888.1| (hypothetical protein H257_07149 [Aphanomyces astaci] >gi|574114464|gb|ETV79952.1| hypothetical protein H257_07149 [Aphanomyces astaci])

HSP 1 Score: 206.838 bits (525), Expect = 8.437e-59
Identity = 121/325 (37.23%), Postives = 179/325 (55.08%), Query Frame = 0
Query:   70 PVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYV---LELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQM 391
            P FV APMV QSE AFRLL +R G  L F+PM +A +V+       MD  +    +      +D P+I QLAG+DP+ +  A   L    +  G+D+NLGCPQ+CA+ G++GAYL + +P+    +VR +     VP++CK+R   D+  +  LARRL  AG SMLTVHGR   +R H+   + D IR +R++V +PV+ANG  ++R+ A   ++YTGC G MSA  LL+NP                            +ALSAS     P   ++ A +YL LA  +PP      RDH+  +++   Q++ + LW ++   Q+
Sbjct:   18 PQFVCAPMVRQSELAFRLLTRRLGCQLAFTPMFVASDVVAA-AAGSMDATIDVSHQFFATADEDRPLIVQLAGNDPITLATAVALL--QHRCDGIDLNLGCPQRCARTGHFGAYLLD-DPDLVEQVVRAMVHVAKVPITCKIRIQQDIRASIDLARRLEDAGCSMLTVHGRLRTQRHHEGTCNWDAIRQIRQSVAIPVLANGGIQSRQHAVECIKYTGCAGVMSATALLQNP----------------------------AALSAS-----PTSVYATALQYLALAREYPPLHADTTRDHILTMMRSKCQRQFIDLWGVIQHVQL 305          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|118399013|ref|XP_001031833.1| (tRNA-dihydrouridine synthase [Tetrahymena thermophila SB210] >gi|89286167|gb|EAR84170.1| tRNA-dihydrouridine synthase [Tetrahymena thermophila SB210])

HSP 1 Score: 204.142 bits (518), Expect = 4.633e-57
Identity = 116/306 (37.91%), Postives = 168/306 (54.90%), Query Frame = 0
Query:   70 PVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRE-RDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGL 374
            P +V APMV QSE AFR+L ++YG TL ++PM+ ++ VL    +DQ   Y+  +   C +D P+ AQ  G++P  +LA A+ + D  +   +DIN GCPQ  AK G YG+YL   EP+T   +V+ + + L +PV+CK+R + +   T  LA+++  AG S+LTVHGR+  + +D   L D D+I+ ++E + +PV ANG   T ED ++ +EYTG DG MSA  LL NP LF                              SG + D +E    A EYL  AE +P P         + L QGL
Sbjct:   72 PQYVCAPMVDQSELAFRMLCRKYGTTLAYTPMIHSK-VL----QDQGYGYLNSVFSTCQEDRPLFAQFCGNNPDALLAGARYVED--KCDAIDINFGCPQGIAKRGRYGSYLL-SEPDTIVALVKKLHENLSIPVTCKIRILPNRQQTIELAKKIEAAGCSILTVHGRTKEQNKDTVGLCDWDIIKIIKEELSIPVFANGGIYTYEDVQKCLEYTGVDGVMSAESLLENPALF------------------------------SGQIYDLDEI---ALEYLEFAEKYPTPHFFSKGHIFKFLHQGL 336          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|471218613|ref|XP_004023845.1| (t-diRNAhydrouridine synthase, putative [Ichthyophthirius multifiliis] >gi|340500057|gb|EGR26961.1| t-diRNAhydrouridine synthase, putative [Ichthyophthirius multifiliis])

HSP 1 Score: 200.675 bits (509), Expect = 7.992e-57
Identity = 119/333 (35.74%), Postives = 178/333 (53.45%), Query Frame = 0
Query:   69 QPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRE-RDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQMVLLRQFSEF 400
            +P ++ APMV QSE AFR+L ++YG TL ++PM+ ++ V      DQ +  +      C +D P+IAQ  G+DP  +L A + +        VDIN GCPQ  AK G+YG++L + EP+    MV+ + +EL +PV+CK+R +   + T  LA+R+  AG S+LTVHGR+  + +D   + D D+I+ +++ + +PV ANG   T +D +R MEYTG DG MSA  LL NP LF                              SG + D ++    A EYL  AE +  P    V+ HL  +L   L Q      N+   SQ+ +++   EF
Sbjct:   20 EPQYICAPMVDQSELAFRMLCRKYGTTLAYTPMISSKVVY-----DQGEKSLKNFFSTCPEDRPLIAQFCGNDPEVLLEACKYI--QKDCDAVDINFGCPQGIAKKGHYGSFLLQ-EPDLIESMVKKLHEELDIPVTCKIRIIRSREKTLELAKRIENAGCSILTVHGRTKEQNKDLVGMCDWDIIKEIKDTLTIPVFANGGIYTFQDVQRCMEYTGVDGVMSAEALLENPALF------------------------------SGKIYDFDDL---AVEYLDFAEKYDAP-FYFVKSHLFKILHKGLAQ------NIDLRSQLGIIKTNEEF 304          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|1004141927|gb|KXZ49917.1| (hypothetical protein GPECTOR_19g368 [Gonium pectorale])

HSP 1 Score: 196.438 bits (498), Expect = 7.184e-55
Identity = 141/375 (37.60%), Postives = 190/375 (50.67%), Query Frame = 0
Query:   77 MVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSL-SDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSS--QMVLLRQFSEFLRLSAVECGVALPEGERLVPVLSLGEIKSLHRRE-----INGQEDEED 443
            MV QSE  FRLL +R+G T  ++PML AR     R       Y  E+L  CA+D P++ Q   +DP  +L AA+     G    +D+NLGCPQ+ AK G YGA+L +  P+    MVR ++Q L +PV+ K+R   D+D T   AR +  AGAS++ VHGR   ++D+ +  +D D IRAV+ A+ VPV+ANGN R   DA   +EYTG DG +SA GLL +P LF    A R A     D  AP                 P E    A EYL L  AHP P +R VR H+  L    L  E   L + +  +   + +  Q  + +R      G   PE     P L   E+ ++ R E     I  QE E D
Sbjct:    1 MVDQSELPFRLLCRRHGATCAYTPMLHARIFSQDRK------YREEMLTSCAEDRPLLVQFCSNDPAHLLKAARMAEASGVADAIDLNLGCPQRIAKRGGYGAFLMDDLPKV-ETMVRTLAQNLRIPVTVKIRIFPDLDRTLAYARMVEAAGASLVAVHGRLREQKDNSATRADWDAIRAVKRALSVPVLANGNIRHLGDAASCLEYTGADGVLSAEGLLFDPALF----APRRAPVAIGDYAAP-----------------PLERLEMAAEYLSLCAAHPVP-LRMVRGHVHKLAGDWL-AEHTDLRDTINRAPPTLAMFTQVVDEVRSRVAASGRDRPE-----PRLGAAELAAMEREEARRAAIEEQEREAD 340          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|302795500|ref|XP_002979513.1| (hypothetical protein SELMODRAFT_444257 [Selaginella moellendorffii] >gi|300152761|gb|EFJ19402.1| hypothetical protein SELMODRAFT_444257 [Selaginella moellendorffii])

HSP 1 Score: 195.667 bits (496), Expect = 1.745e-54
Identity = 118/303 (38.94%), Postives = 177/303 (58.42%), Query Frame = 0
Query:   70 PVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSL-SDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALL 371
            P F++APMV QSE  FR+L ++YG T  ++PML AR      +ED+   Y       C +D P++ Q   ++P  +LAAA+ +        +DINLGCPQ+ AK GNYGA+L +  P   A++ +L+S  L VPVSCK+R    +D T   A+ L  +G S+L VHGR+  ++  +++ +D +VIRAV++A+ +PV+ANGN R+ EDAER ++ TG DG +SA  LL NP LF      +P+ S             +    +S  ++DP    +   EYL   E +P P+ +C+R H+  LL
Sbjct:   52 PKFMVAPMVDQSELPFRMLCRKYGATGAYTPMLHARLF----SEDR--KYRNYEFTTCPEDRPLLIQFCANNPDTLLAAAKLVEPFCDY--IDINLGCPQRIAKRGNYGAFLMDDLPLVQALVTKLVSN-LDVPVSCKIRMFPSLDDTISYAKMLESSGCSLLAVHGRTREQKCSRTVRADWEVIRAVKQALRIPVLANGNIRSLEDAERCIQETGVDGVLSAESLLENPALFAGYRTFKPSDS------------EDDEQGSSKLMIDP---VTLLMEYLDQCEKYPAPD-KCIRAHVHRLL 329          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|156364501|ref|XP_001626386.1| (predicted protein [Nematostella vectensis] >gi|156213260|gb|EDO34286.1| predicted protein [Nematostella vectensis])

HSP 1 Score: 192.586 bits (488), Expect = 2.393e-54
Identity = 116/288 (40.28%), Postives = 163/288 (56.60%), Query Frame = 0
Query:   48 EWPLPSPPRR--FSFLREGFDETQPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDP-YVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRS-PRERDHQSLSDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSA 331
            E PL    ++  F F R      +  +V+APMV QSE A+R+L +RYG  L ++PM  A   +        DP Y  E+++ C  D P+I Q   +DP   + AA  L    +  GVD+NLGCPQ  AK G+YGA+L + E E    MV+L  ++L VP++CK+R   DV  T   A+ L  AG  +LTVHGR+  ++R+   L+D D I+AVRE + +PV ANGN +   D  R +EYTGC+G M+A G L NP LF  S   +P     A+        H+++LSA
Sbjct:    4 EKPLSKQTKKKGFDFWRNTLKSAR--YVVAPMVDQSELAWRMLSRRYGAELCYTPMFHAGMFI-------RDPIYRSEMMQTCVGDRPLIVQFCANDPEVFVQAA--LLVESECDGVDLNLGCPQHIAKRGHYGAFLQD-EWELLEKMVKLAHEKLSVPITCKIRVFDDVQKTIAYAKMLESAGCQLLTVHGRTREQKRELTGLADWDQIKAVRENLNIPVFANGNIQYLSDVTRCLEYTGCNGVMTAEGNLSNPALFTGS---QPYVWSMANEYLELATKHKASLSA 276          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|302792084|ref|XP_002977808.1| (hypothetical protein SELMODRAFT_443602 [Selaginella moellendorffii] >gi|300154511|gb|EFJ21146.1| hypothetical protein SELMODRAFT_443602 [Selaginella moellendorffii])

HSP 1 Score: 194.126 bits (492), Expect = 7.480e-54
Identity = 118/303 (38.94%), Postives = 176/303 (58.09%), Query Frame = 0
Query:   70 PVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSL-SDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALL 371
            P F++APMV QSE  FR+L ++YG T  ++PML AR      +ED+   Y       C +D P++ Q   ++P  +LAAA+ +        +DINLGCPQ+ AK GNYGA+L +  P   A++ +L+S  L VPVSCK+R    +D T   A+ L  +G S+L VHGR+  ++  +++ +D +VIRAV++A+ +PV+ANGN R  EDAER ++ TG DG +SA  LL NP LF      +P+ S             +    +S  ++DP    +   EYL   E +P P+ +C+R H+  LL
Sbjct:   52 PKFMVAPMVDQSELPFRMLCRKYGATGAYTPMLHARLF----SEDR--KYRNYEFTTCPEDRPLLIQFCANNPDTLLAAAKLVEPFCDY--IDINLGCPQRIAKRGNYGAFLMDDLPLVQALVTKLVSN-LDVPVSCKIRMFPSLDDTISYAKMLESSGCSLLAVHGRTREQKCSRTVRADWEVIRAVKQALRIPVLANGNIRWLEDAERCIQETGVDGVLSAESLLENPALFAGYRTFKPSDS------------EDEEQGSSKLMIDP---VTLLMEYLDQCEKYPAPD-KCIRAHVHRLL 329          
BLAST of EWM27226.1 vs. NCBI_GenBank
Match: gi|527192827|gb|EPS63093.1| (hypothetical protein M569_11689, partial [Genlisea aurea])

HSP 1 Score: 190.66 bits (483), Expect = 7.545e-53
Identity = 127/346 (36.71%), Postives = 183/346 (52.89%), Query Frame = 0
Query:   69 QPVFVLAPMVLQSERAFRLLVQRYGVTLTFSPMLLARNVLLKRNEDQMDPYVLELLRPCADDTPVIAQLAGSDPLEMLAAAQRLWDGGQIAGVDINLGCPQQCAKAGNYGAYLAEREPETAAIMVRLISQELGVPVSCKLRNMYDVDTTTRLARRLAGAGASMLTVHGRSPRERDHQSL-SDLDVIRAVREAVPVPVVANGNCRTREDAERAMEYTGCDGFMSAIGLLRNPRLFGASGAARPAASPAADATAPAVPGHESALSASGTLVDPEEAFSCAWEYLRLAEAHPPPEVRCVRDHLQALLQGLLQQERVALWNLLGSSQMVLLRQFSEFLRLSAVECGVALP 413
            +P F++APMV  SE  FRLL ++YG    ++PML +R  +   NE     Y  +    C +D P+  Q   +DP  +L AA+ +        VDINLGCPQ+ A+ GNYGA+L +  P   +++ +L S+ L VPVSCK+R   ++  T + A+ L  AG S+L VHGR+  E+D +   ++ +VI+AVREAV +PV+ANGN R  EDAE  +E TG +G +SA  LL NP LF  +G       P  D       G E      G L+          EYL+L E +P P  R VR H+  L+    +       +L   +++     +  F R    E GV +P
Sbjct:   23 RPKFIVAPMVDNSELPFRLLCRKYGAQAAYTPMLHSR--IFSENEK----YRSQEFTTCQEDRPLFVQFCANDPNVLLNAARIV--EPHCDYVDINLGCPQRIARRGNYGAFLMDNLPLVKSLVEKL-SENLTVPVSCKIRMFPNLQDTIKYAKMLEEAGCSILAVHGRTRDEKDSKKFRANWEVIKAVREAVRIPVLANGNIRYIEDAEECLEVTGAEGVLSAETLLENPALF--AGYRTCEWVPDGDG------GFEDGKLDQGELLV---------EYLKLCEKYPVP-WRMVRSHVHKLMGDWFRIHTTVRDDLNSQTKLTFEFLYGIFDRFR--ELGVRIP 339          
The following BLAST results are available for this feature:
BLAST of EWM27226.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585109406|gb|EWM27226.1|0.000e+0100.00dihydrouridine synthase, partial [Nannochloropsis ... [more]
gi|857977093|emb|CEO96840.1|1.834e-6036.73hypothetical protein PBRA_005444 [Plasmodiophora b... [more]
gi|698795718|ref|XP_009830888.1|8.437e-5937.23hypothetical protein H257_07149 [Aphanomyces astac... [more]
gi|118399013|ref|XP_001031833.1|4.633e-5737.91tRNA-dihydrouridine synthase [Tetrahymena thermoph... [more]
gi|471218613|ref|XP_004023845.1|7.992e-5735.74t-diRNAhydrouridine synthase, putative [Ichthyopht... [more]
gi|1004141927|gb|KXZ49917.1|7.184e-5537.60hypothetical protein GPECTOR_19g368 [Gonium pector... [more]
gi|302795500|ref|XP_002979513.1|1.745e-5438.94hypothetical protein SELMODRAFT_444257 [Selaginell... [more]
gi|156364501|ref|XP_001626386.1|2.393e-5440.28predicted protein [Nematostella vectensis] >gi|156... [more]
gi|302792084|ref|XP_002977808.1|7.480e-5438.94hypothetical protein SELMODRAFT_443602 [Selaginell... [more]
gi|527192827|gb|EPS63093.1|7.545e-5336.71hypothetical protein M569_11689, partial [Genlisea... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3550rna3550Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications