EWM27184.1, cds3539 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|585109364|gb|EWM27184.1| (vacuolar protein sorting-associated protein 25 [Nannochloropsis gaditana]) HSP 1 Score: 377.481 bits (968), Expect = 1.804e-132 Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0
Query: 1 MVVSPVPPEEVLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVADA 184
MVVSPVPPEEVLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVADA
Sbjct: 1 MVVSPVPPEEVLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVADA 184
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|698794664|ref|XP_009830361.1| (hypothetical protein, variant [Aphanomyces astaci] >gi|574114950|gb|ETV80437.1| hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 182.185 bits (461), Expect = 2.366e-55 Identity = 88/174 (50.57%), Postives = 115/174 (66.09%), Query Frame = 0
Query: 11 VLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVADA 184
PE++GFPPFFTLQPV TR+ QL LW+ LVL +H++ +L N P+F N INR L ++ R +V LV G+AEW+DD+ T + W+ E AA I TF D GM NVYTVYEL +G+E T GA F+G EP + R+ALEILE + KAA+ G + E DG+KF+A A
Sbjct: 9 TFPEHYGFPPFFTLQPVRSTREKQLILWKALVLDYHKSMNQPVLTPNSSPIFENQQINRKLSMEARTAIVTYLVRCGNAEWEDDTHTRLRIFWKPPAEWAAEIYTFATDRGMISNVYTVYELHSGEE-TQGASFYGLEPWLLRKALEILEHEAKAAIIHGDTPENDGVKFLATA 181
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|669163018|ref|XP_008617071.1| (hypothetical protein SDRG_12768 [Saprolegnia diclina VS20] >gi|530731277|gb|EQC29519.1| hypothetical protein SDRG_12768 [Saprolegnia diclina VS20]) HSP 1 Score: 178.333 bits (451), Expect = 8.383e-54 Identity = 85/173 (49.13%), Postives = 114/173 (65.90%), Query Frame = 0
Query: 12 LPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVADA 184
PE++ FPPFFTLQP+ TR+ QL LW+ LV+++H+A I N P+F N INR L ++ R VV +V G+ EW+DD+ T + W+S E AA I F +DNGM NVYT+YEL AGDE T GA F+G E + R+ALE+LE + KAA+ G + E DG+KF+A A
Sbjct: 11 FPEHYHFPPFFTLQPIRSTREKQLILWKTLVVEYHRALQQPIFTPNTTPIFENTTINRKLSMEARHAVVSYIVRCGNGEWEDDTHTRCRIFWKSPAEWAAEIYAFAQDNGMLNNVYTLYELHAGDE-TEGASFYGIEMWLLRKALEVLEHEAKAAIIHGDTPENDGVKFLATA 182
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|673014378|ref|XP_008861150.1| (hypothetical protein H310_00228 [Aphanomyces invadans] >gi|574482748|gb|ETW09739.1| hypothetical protein H310_00228 [Aphanomyces invadans]) HSP 1 Score: 177.178 bits (448), Expect = 1.802e-53 Identity = 86/172 (50.00%), Postives = 112/172 (65.12%), Query Frame = 0
Query: 11 VLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVA 182
PE++ FPPFFTLQPV TR+ QL LW+ LVL +H+A +L N +F N INR L ++ R +V LV G+AEW+DD+ T + W+ E AA I TF D GM NVYTVYEL +G+E T GA FHG EP + R+ALEILE + KAA+ G + + DG+KF+A
Sbjct: 9 TFPEHYSFPPFFTLQPVRSTREKQLILWKALVLDYHKAMNQPVLTPNSTSIFENQQINRKLSMEARTAIVTYLVRCGNAEWEDDTHTRLRIFWKPPAEWAAEIYTFANDRGMINNVYTVYELHSGEE-TEGASFHGLEPWLLRKALEILELEAKAAIIHGDTPDNDGVKFLA 179
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|325183621|emb|CCA18081.1| (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 174.096 bits (440), Expect = 3.912e-52 Identity = 82/174 (47.13%), Postives = 115/174 (66.09%), Query Frame = 0
Query: 9 EEVLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVA 182
E PEY FPPFFT+QPV TR+ QL LW++L+L +H AK V I P+F N I+R + +GR +++ L+ G+A W+D S+T V+W+ E A + F++D GM G +YTVYEL AG+E T+G+ FHG EP I R AL+ILE+ GKA L G++ + DG+KF+A
Sbjct: 6 EFTFPEYFDFPPFFTIQPVRATREKQLGLWKQLILDYHHAKEVSIFNPQTSPVFENSKISRKMKSEGRTTIIEFLIQCGNAMWEDISQTRCRVMWKKPTEWAVELYDFVKDRGMLGEIYTVYELYAGEE-TLGSQFHGMEPWILRDALKILEQHGKAMLIFGATCQEDGVKFIA 178
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|635359929|emb|CCI11058.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 172.555 bits (436), Expect = 1.139e-51 Identity = 81/174 (46.55%), Postives = 114/174 (65.52%), Query Frame = 0
Query: 9 EEVLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVA 182
E PEY+ FPPFFTLQPV TR+ QL LW++L+L +HQA+ + I PLFAN I+R + +G+ +++ L+ G+A W+D S T ++W+ E AA + F++ GM G +YTVYEL AG+E T+G+ FHG EP R AL+ILE GK L G++ E DG+KF+A
Sbjct: 6 EFTFPEYYDFPPFFTLQPVRATREKQLGLWKQLILDYHQARHLSIFSPQTSPLFANCKISRKMKAEGQTAIIEYLIQCGNAIWEDASETRCRLIWKKPAEWAAELYDFVKGRGMLGKIYTVYELYAGEE-TLGSQFHGMEPWSLRDALKILEEHGKVVLISGTTCEEDGVKFIA 178
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|1173932540|gb|OQR84489.1| (hypothetical protein ACHHYP_13295 [Achlya hypogyna]) HSP 1 Score: 172.94 bits (437), Expect = 1.183e-51 Identity = 85/185 (45.95%), Postives = 117/185 (63.24%), Query Frame = 0
Query: 1 MVVSPVPPEE-VLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVADA 184
M +P P PE++ FPPFFTLQP+ TR+ QL LW+ LV+ +H+A I N P+F N I+R L ++ R VV LV G+AEW+DD+ T + W+S E AA I F ++ GM NVYT++EL AG+E T GA F+G E + R+ALE+LE + KAA+ G + E DG+KF+A A
Sbjct: 1 MTTAPAPATTFTFPEHYHFPPFFTLQPIRSTREKQLILWKALVVDYHRALNQPIFTPNTTPIFENRDISRKLSMEARHAVVSYLVRCGNAEWEDDTHTRCRIFWKSPAEWAAEIYAFAQERGMLNNVYTLFELHAGEE-TQGASFYGIESWLLRKALEVLEHEAKAAIIHGDTPENDGVKFLATA 184
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|675180629|ref|XP_008899199.1| (hypothetical protein PPTG_06905 [Phytophthora parasitica INRA-310] >gi|566032609|gb|ETI55520.1| hypothetical protein F443_01799 [Phytophthora parasitica P1569] >gi|567970310|gb|ETK95351.1| hypothetical protein L915_01714 [Phytophthora parasitica] >gi|567998677|gb|ETL48742.1| hypothetical protein L916_01686 [Phytophthora parasitica] >gi|568027853|gb|ETM01798.1| hypothetical protein L917_01651 [Phytophthora parasitica] >gi|568058402|gb|ETM55032.1| hypothetical protein L914_01707 [Phytophthora parasitica] >gi|568100988|gb|ETN15678.1| hypothetical protein PPTG_06905 [Phytophthora parasitica INRA-310] >gi|570336329|gb|ETO84277.1| hypothetical protein F444_01800 [Phytophthora parasitica P1976] >gi|570960372|gb|ETP25351.1| hypothetical protein F441_01762 [Phytophthora parasitica CJ01A1] >gi|570996821|gb|ETP53353.1| hypothetical protein F442_01736 [Phytophthora parasitica P10297]) HSP 1 Score: 171.785 bits (434), Expect = 2.226e-51 Identity = 81/170 (47.65%), Postives = 116/170 (68.24%), Query Frame = 0
Query: 13 PEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVA 182
PEY+ FPPFFTLQPV TR+ QL LW++L+L++H+A + + + LF N I+R + DGR VV+ L+ GH W+DD++T ++W+ E AA I F +++GM GNV+TVYEL AG+E T+G + HG EP + R AL +LE +GKAA+ G + E DG+KF+A
Sbjct: 7 PEYYDFPPFFTLQPVRATREKQLVLWQQLILEYHRAHDLPLFQPLASTLFENVKISRNMAQDGRMAVVEHLIRCGHGRWEDDTKTRCRIMWKKPAEWAAEIYDFAKEHGMLGNVFTVYELYAGEE-TLGTNIHGMEPWLLREALRVLEGEGKAAVIAGETCEEDGVKFLA 175
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|743796780|ref|XP_010924814.1| (PREDICTED: vacuolar protein sorting-associated protein 25 [Elaeis guineensis] >gi|743796784|ref|XP_010924815.1| PREDICTED: vacuolar protein sorting-associated protein 25 [Elaeis guineensis]) HSP 1 Score: 164.081 bits (414), Expect = 2.928e-48 Identity = 78/172 (45.35%), Postives = 119/172 (69.19%), Query Frame = 0
Query: 12 LPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNE-WPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKFVA 182
LP + +PP+FTLQPV ETR+ Q++LW+EL+L + + + + ++ L E +PLF+NP I R+L + R+ + +LV+ GHAEW D S L+LWR Q+ AA IL F+++NG +V TV ++R+G E T G D G + + RAL +LE++GKAA+FKG+S + +G+KF A
Sbjct: 9 LPYFFNYPPYFTLQPVRETREKQVQLWKELILDYCRNQKIFVIGLEEDFPLFSNPVIERSLSHEARKVFLNALVAEGHAEWMDKSHKKCLILWRRIQDWAAYILNFVKENGFEDSVMTVEDIRSGIE-TRGTDLAGIDRGVLMRALRLLEQKGKAAIFKGTSADDEGVKFSA 179
BLAST of EWM27184.1 vs. NCBI_GenBank
Match: gi|219125135|ref|XP_002182843.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405637|gb|EEC45579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 163.696 bits (413), Expect = 3.260e-48 Identity = 75/173 (43.35%), Postives = 112/173 (64.74%), Query Frame = 0
Query: 8 PEEVLPEYHGFPPFFTLQPVLETRKMQLKLWRELVLKWHQAKGVQILKLNEWPLFANPAINRTLPLDGRREVVQSLVSSGHAEWKDDSRTTALVLWRSAQEVAASILTFIRDNGMAGNVYTVYELRAGDEITVGADFHGTEPTIFRRALEILERQGKAALFKGSSEEGDGIKF 180
P+ PE++ FPPFFT+QPVL TR+ Q+ LWREL+L++H K ++ L +++ PL+ N I R L +EV+ GH EW+D ++TT +LWR+ +++A I + NG G+V TVYEL +G+++ G F G + + RRAL ILE +GK +F+G + E DGIKF
Sbjct: 2 PDFQYPEFYSFPPFFTIQPVLATREKQMALWRELILRYHTEKKIKTLVVHDCPLWKNDNIKRRLQPGEIQEVLDDFCRHGHGEWQDANKTTCRILWRTPEQLATDIHQWAEKNGYVGSVCTVYELHSGEDVN-GMSFQGADEELLRRALSILEDRGKCTIFRGETSEEDGIKF 173 The following BLAST results are available for this feature:
BLAST of EWM27184.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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